FFCP PHASE1:Hg19::chr6:152958521..152958549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23345 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17089 | |||
|TSSclassifier=strong | |||
|UniProt=Q8NF91,E7ENN3,E7EQI5,E9PEL9 | |||
|association_with_transcript=0bp_to_ENST00000265368,ENST00000341594,ENST00000367255,ENST00000448038,NM_182961,uc003qou.3,uc010kiw.2_5end | |||
|description=CAGE_peak_9_at_SYNE1_5end | |||
|id=chr6:152958521..152958549,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.63e-11;82!UBERON:0006215;9.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.52e-61!115;UBERON:0001049!1.96e-32!57;UBERON:0005068!1.96e-32!57;UBERON:0006241!1.96e-32!57;UBERON:0007135!1.96e-32!57;UBERON:0002616!9.97e-28!59;UBERON:0000955!4.05e-27!69;UBERON:0006238!4.05e-27!69;UBERON:0001017!7.88e-25!82;UBERON:0005743!7.70e-24!86;UBERON:0003080!9.28e-24!42;UBERON:0000073!1.09e-23!94;UBERON:0001016!1.09e-23!94;UBERON:0002780!7.92e-23!41;UBERON:0001890!7.92e-23!41;UBERON:0006240!7.92e-23!41;UBERON:0003075!8.52e-23!86;UBERON:0007284!8.52e-23!86;UBERON:0002346!8.37e-21!90;UBERON:0002020!2.81e-18!34;UBERON:0003528!2.81e-18!34;UBERON:0001893!5.58e-18!34;UBERON:0000153!3.72e-17!129;UBERON:0007811!3.72e-17!129;UBERON:0002791!3.76e-17!33;UBERON:0001869!1.35e-16!32;UBERON:0002619!1.39e-15!22;UBERON:0000033!3.28e-15!123;UBERON:0001950!2.31e-14!20;UBERON:0003056!7.34e-14!61;UBERON:0000956!8.29e-13!25;UBERON:0000203!8.29e-13!25;UBERON:0004121!2.40e-12!169;UBERON:0000924!1.61e-11!173;UBERON:0006601!1.61e-11!173;UBERON:0000475!3.30e-11!365;UBERON:0003076!9.93e-10!15;UBERON:0003057!9.93e-10!15;UBERON:0002298!3.14e-09!8;UBERON:0004732!4.20e-09!13;UBERON:0004733!3.23e-08!12;UBERON:0002028!3.23e-08!12;UBERON:0007277!3.23e-08!12;UBERON:0000062!1.34e-07!511;UBERON:0002308!4.80e-07!9;UBERON:0000125!4.80e-07!9;UBERON:0000477!9.91e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;3.67e-23;53!UBERON:0002616;3.67e-23;53!UBERON:0007023;5.48e-20;114!UBERON:0002780;1.66e-17;41!UBERON:0001890;1.66e-17;41!UBERON:0003528;2.99e-17;34!UBERON:0002020;2.99e-17;34!UBERON:0001893;1.07e-16;34!UBERON:0004732;8.09e-16;13!UBERON:0002791;1.59e-15;32!UBERON:0001869;3.23e-15;32!UBERON:0002619;1.38e-14;22!UBERON:0001950;3.44e-14;20!UBERON:0004733;3.60e-14;12!UBERON:0002028;3.60e-14;12!UBERON:0002298;1.35e-13;6!UBERON:0000955;5.56e-13;68!UBERON:0000956;1.88e-12;25!UBERON:0000203;1.88e-12;25!UBERON:0001017;5.40e-12;75!UBERON:0000200;2.76e-11;6!UBERON:0000125;1.39e-10;9!UBERON:0002308;1.39e-10;9!UBERON:0001016;3.96e-10;83!UBERON:0002680;8.64e-09;9!UBERON:0001895;8.64e-09;9!UBERON:0001896;1.24e-07;3!UBERON:0005290;1.24e-07;3!UBERON:0000988;1.25e-07;3!UBERON:0009663;4.53e-07;7!UBERON:0007100;6.28e-07;25!UBERON:0001870;8.04e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.36e-67,114;UBERON:0000073,2.46e-38,53;UBERON:0002616,2.46e-38,53;UBERON:0001049,7.70e-38,56;UBERON:0005068,7.70e-38,56;UBERON:0006241,7.70e-38,56;UBERON:0007135,7.70e-38,56;UBERON:0003075,1.39e-30,82;UBERON:0007284,1.39e-30,82;UBERON:0000955,1.70e-30,68;UBERON:0006238,1.70e-30,68;UBERON:0002346,1.38e-28,86;UBERON:0001017,8.01e-27,81;UBERON:0002780,7.44e-26,41;UBERON:0001890,7.44e-26,41;UBERON:0003080,7.44e-26,41;UBERON:0006240,7.44e-26,41;UBERON:0001016,1.38e-24,89;UBERON:0010371,1.58e-21,104;UBERON:0010314,1.89e-21,132;UBERON:0003528,4.49e-21,34;UBERON:0002020,4.49e-21,34;UBERON:0001893,1.29e-20,34;UBERON:0001869,3.43e-18,32;UBERON:0002791,5.17e-18,32;UBERON:0003056,6.91e-18,61;UBERON:0004732,6.79e-16,13;UBERON:0002619,8.09e-15,22;UBERON:0001950,1.88e-14,20;UBERON:0004733,3.82e-14,12;UBERON:0002028,3.82e-14,12;UBERON:0007277,3.82e-14,12;UBERON:0002298,1.48e-13,6;UBERON:0003076,4.61e-13,15;UBERON:0003057,4.61e-13,15;UBERON:0000956,1.18e-12,25;UBERON:0000203,1.18e-12,25;UBERON:0000025,1.73e-11,192;UBERON:0000200,2.00e-11,6;UBERON:0004121,4.68e-11,171;UBERON:0000924,4.68e-11,171;UBERON:0006601,4.68e-11,171;UBERON:0000125,1.03e-10,9;UBERON:0002308,1.03e-10,9;UBERON:0004111,1.34e-09,240;UBERON:0002680,8.58e-09,9;UBERON:0001895,8.58e-09,9;UBERON:0010092,8.58e-09,9;UBERON:0011216,1.23e-08,223;UBERON:0000988,1.25e-07,3;UBERON:0001896,1.36e-07,3;UBERON:0005290,1.36e-07,3;UBERON:0010096,1.36e-07,3;UBERON:0009663,3.46e-07,7;UBERON:0001870,6.09e-07,3;UBERON:0001894,9.75e-07,7;UBERON:0006222,9.75e-07,7 | |||
|phase1_expression=0.363356758541113,0,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0.376484679085209,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561643155732475,0.150176892841506,0.48217676009124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196709770113833,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383220493601921,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,2.43806866313962,0,0,2.53007406669196,0.50133791063589,0.289693037921647,1.5905718941022,0,0,0,0,2.22664428346111,0,0,1.29818957461873,1.56716763569341,0.930705723632056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23486899728753,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0,0,0,0,0.125118519871964,0,0.438977620880838,0.30648779579902,0.300476117813194,0,1.25572744982203,0.213557388818567,0,1.50045548042201,0.206105058476878,1.28820270022815,0.18611685633159,3.03797398034279,0.389748020644795,2.77677151668526,0.276149695926898,0.323292113637624,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0.205476322550383,0.179060963239896,0,0.591092280605782,0.646882724578552,0.128343036279748,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0,0.500170521059677,0,0.207970861530807,0.356857977594324,0.157702415033935,0,0,0,0,1.99267679560631,0.184369168541703,0.173767228936166,0,0,0,0,0.213455115606889,0,0,0,0,2.76231551918512,1.12264037773229,0,1.53512174720011,0.321707842287215,0,0,0,0,0,0.116210378459959,0,0,0,0,0.182091168006717,0.393373244878272,0,0.308061348417659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.33953315142039,0,0,0,0,0,0,0.308097234229289,0.307007349452259,0,0,0.290033387828457,0.255679882248303,0.178064071293475,0,0,0,0,0,0.62962469366128,0.6970372701606,0,0,0,0.37064843820784,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0.274537029736055,0.117812402345686,0,0,0,0,0,0,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,1.26664581178598,2.30506425071931,0,0,0,0,0,2.35359501941948,0,0,0,0,0,0,0,0.714695326373367,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851692475380653,0,0,0,0,0,0,0,0,0,0,0,3.95572084034114,0,7.68959351514601,0,0,0,0,0.994147647766298,0.844016498463076,0,0,0,0.996239941255349,0,0,0.20453736500431,0,1.24415835064723,0,0,0,0.690503839458535,0,4.44547960578548,0.969332746095218,2.04089815956073,0,0,0,3.62499787717397,0,0,0,0,0,0,0,2.53252521113357,4.5774520895125,13.1589319318157,6.50204761697804,1.31631238292384,0,0,2.30850775511391,0.113942055847001,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353830258013357,0,0,0,0,1.41542379259422,2.40773294189637,0.937057782901357,0,0,0,5.91876604274086,0,0.61214552326098,0.758238955541855,0.150323419414493,0.103688191397247,0,0,0,0,0,0,0,0,0,1.92199335066233,2.57979048707425,0,0,0,0.872901148395775,0.794305140223502,0,0,0.397429223405979,2.91229661397042,0,0,0.213452994739353,0,0,0.229073192331831,0,0,0,0,0.543616824294456,1.35983700206033,0,0,0.600420288709789,2.46429682005587,0,0,0,3.35138881526705,2.06244381610515,1.43574604915363,2.1964690054889,2.14613024068285,2.4548860318606,1.2764859772478,0.360299883542404,0,0,0,0,0,0,0.795229689809303,1.36203406111576,0,0,0,0,0,2.49073182297901,0,2.12775409707835,0.786818822024972,0,0,0,1.42939065274673,1.32418394073086,0,0,0,0,0,0,0.681552087141687,0,0.146552233678082,0,4.00777164720807,3.43804764530994,0,0,4.80543356554626,0.78602152549833,2.48543433208317,0.496166021811951,0.197611631897944,0,0,1.08803560673895,2.7575888342497,1.83807346058077,0.655745261419609,0,2.65820453990096,1.95242023843141,2.1282458220105,5.73409195690071,5.87923973145317,3.16691655001056,0,0.249960815924213,0,0,0,0.468334905806882,0.28984205722165,0.298509605773748,0,0,0.189403005275089,0,0.889811221596536,0,1.05861646634267,0,0,0.796483835818512,0,0,0,0,0,0.901545653983311,0,0.813741466409323,0.363697318405119,0.966695013382396,0.928067519756987,0,0,0.343395705182793,1.01024846629776,2.52369796457302,0.192619830407303,0,0,0.226705925512272,0,0.244736704506468,0.358177682162975,0.617602894321944,0,0.706756583783524,0,0.337884881306145,0,0,0,2.07387654227596,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0.323474434190045,0,0,0,0,0,0,0.318004350653419,0,0,0,0.6124909547064,2.50493977876192,1.41696576325585,1.75597244962866,0.615349092722265,1.00828678488687,1.86724581653388,1.61475645631851,2.85538840518309,0,0,0,0,0,0,0,2.48194083552549,0.20170506870352,0,0,0,0,2.4988906308806,0.781078098613847,1.44680757550829,3.10737469950143,0.546974809018219,0,1.48863353516788,0,0,1.07140367175657,0.336283722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| |||
|short_description=p9@SYNE1 | |||
}} |
Revision as of 14:41, 22 January 2014
Short description: | p9@SYNE1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_SYNE1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000265368, ENST00000341594, ENST00000367255, ENST00000448038, NM_182961, uc003qou.3, uc010kiw.2_5end |
EntrezGene: | SYNE1 |
HGNC: | 17089 |
UniProt: | Q8NF91E7ENN3E7EQI5E9PEL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data