FFCP PHASE1:Hg19::chr7:38357258..38357299,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=445347 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |||
|TSSclassifier=not | |||
|UniProt= | |||
|association_with_transcript=289bp_to_uc003tge.1_5end | |||
|coexpression_cluster_id=C1996 | |||
|description=CAGE_peak_2_at_TARP_5end | |||
|id=chr7:38357258..38357299,- | |||
|ontology_enrichment_celltype=CL:0000037!5.83e-21!172;CL:0000566!5.83e-21!172;CL:0000988!9.89e-19!182;CL:0002032!9.88e-18!165;CL:0000837!9.88e-18!165;CL:0000625!1.61e-17!11;CL:0000738!1.48e-15!140;CL:0000791!9.56e-14!18;CL:0000789!9.56e-14!18;CL:0002420!9.56e-14!18;CL:0002419!9.56e-14!18;CL:0000790!9.56e-14!18;CL:0002087!1.72e-12!119;CL:0002031!1.03e-11!124;CL:0000084!1.23e-11!25;CL:0000827!1.23e-11!25;CL:0000763!2.66e-10!112;CL:0000049!2.66e-10!112;CL:0000838!4.25e-08!52;CL:0000542!7.77e-08!53;CL:0000051!7.77e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.85e-36;11!CL:0000791;7.00e-30;18!CL:0000789;7.00e-30;18!CL:0002419;7.00e-30;18!CL:0000084;7.41e-24;25!CL:0000623;1.36e-11;3!CL:0000226;3.59e-11;3!CL:0000842;3.59e-11;3!CL:0000767;3.91e-11;3!CL:0000542;8.24e-09;53!CL:0002087;2.62e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,6.35e-36,11;CL:0000791,5.66e-30,18;CL:0000789,5.66e-30,18;CL:0002420,5.66e-30,18;CL:0002419,5.66e-30,18;CL:0000790,5.66e-30,18;CL:0000037,3.18e-25,168;CL:0000084,7.44e-24,25;CL:0000827,7.44e-24,25;CL:0000988,1.98e-23,177;CL:0000738,1.64e-21,136;CL:0002032,9.93e-21,161;CL:0000837,9.93e-21,161;CL:0002087,3.75e-20,115;CL:0000838,4.12e-15,52;CL:0000542,9.55e-15,53;CL:0000051,9.55e-15,53;CL:0002031,1.11e-14,120;CL:0000623,1.34e-11,3;CL:0000825,1.34e-11,3;CL:0000226,2.68e-11,3;CL:0000842,2.68e-11,3;CL:0000767,4.48e-11,3;CL:0000893,1.69e-08,2;CL:0002489,1.69e-08,2;CL:0000809,1.69e-08,2;CL:0000808,1.69e-08,2;CL:0000894,1.69e-08,2;CL:0000806,1.69e-08,2;CL:0000807,1.69e-08,2;CL:0000805,1.69e-08,2;CL:0002425,1.69e-08,2;CL:0000763,3.84e-08,108;CL:0000049,3.84e-08,108;CL:0000134,7.64e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000790;7.00e-30;18!CL:0000051;8.24e-09;53!CL:0002425;1.63e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.62e-20!115;UBERON:0000178!9.49e-15!15;UBERON:0000179!9.49e-15!15;UBERON:0000463!9.49e-15!15;UBERON:0002390!1.06e-14!102;UBERON:0003061!1.06e-14!102;UBERON:0002193!5.25e-14!112;UBERON:0004177!1.94e-08!7;UBERON:0002370!2.09e-07!4;UBERON:0005058!2.09e-07!4;UBERON:0009113!2.09e-07!4;UBERON:0003295!2.09e-07!4;UBERON:0005562!2.09e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.23e-31;15!UBERON:0000179;2.23e-31;15!UBERON:0000463;2.23e-31;15!UBERON:0002390;1.92e-27;32!UBERON:0002193;1.48e-14;42!UBERON:0004177;2.43e-10;5!UBERON:0005057;2.43e-10;5!UBERON:0002370;2.12e-07;2!UBERON:0005058;2.12e-07;2!UBERON:0009113;2.12e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.99e-31,15;UBERON:0000179,1.99e-31,15;UBERON:0000463,1.99e-31,15;UBERON:0002390,1.34e-24,98;UBERON:0003061,1.34e-24,98;UBERON:0002193,1.30e-21,108;UBERON:0004177,7.38e-17,7;UBERON:0005057,7.38e-17,7;UBERON:0002370,3.99e-14,4;UBERON:0005058,3.99e-14,4;UBERON:0009113,3.99e-14,4;UBERON:0003295,3.99e-14,4;UBERON:0005562,3.99e-14,4;UBERON:0003081,1.38e-09,203;UBERON:0003351,2.00e-09,6;UBERON:0002405,7.66e-08,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,6.68719270643137,10.747223146722,2.16742572642506,0,0,0,0,0,1.17440175733939,2.21598163412751,4.41197784434312,0.868043482863407,0.671746422719773,2.91504299417082,1.80302897343931,0,0.755751887377619,0,0,1.6446715520873,0,0,1.5369642391746,0,0,1.29096936716765,1.35426486594342,0,0.272906150057846,0,0.612167784741805,2.56743221660875,0.639337125799041,0,0.199463657621632,0,0,2.26954089876456,0,0.251248665256743,0,0,0,1.47311054395026,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0.587237189370939,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0.328875809207352,0,0.869409257205157,0,0,0,0.793165398882963,14.562378756873,1.37450978193052,2.02415753615602,2.86708872891687,2.60433381542567,4.75226022224187,14.605786550544,17.7901389504642,11.2437653897111,4.73554504088034,3.28451198768419,15.1205057418549,1.60464117470104,1.15859523106239,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.327447688744282,0,0,0,0,0,0,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414656231081544,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.1333711423753,19.3090144997889,11.4282614675544,5.39040752374943,0,0,0,0,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8872978808479,1.94142780736755,17.0764092485511,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.522870902049801,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.470719003883896,0,0,0,0,6.08937131078603,5.35246044999663,9.68400218196076,13.8174429765518,13.1635927387582,3.24236655596359,3.24018862342869,2.37937552888281,0,0,0,0,0,0,0.159426272728822,17.1638259432222,0.766021480529467,1.05836791361941,0,0.842391534340376,0,0.156679895773023,2.50634477090067,0,0,0.201799707191048,0,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0.828851746593443,0,0,0,0,0,0,17.3934605877136,0.295930216910801,23.948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.153900517007594,0,0,0,0,0.638002319463839,0,0.533034776018635,1.02193298195737,5.49430897382587,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.442287822516696,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27746588066972,0,0,0,0.229160424011684,0.717873024576814,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439656701034247,0,0,0,0,0,0.427149650270779,0.943225830597996,0.828478110694391,0.992332043623902,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7537427795545,0.398594520940089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.126831620387814,0,0,2.48105589194647,0,0,0,0,0,0,0.266107110487916,0,0,0.0679697329768317,0,0,0,0.470958557103084,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848915739187391,1.5299169235277,0,0,0,0,0,0,0,1.97366227757693,1.54698931136585,0,0,0,0,0,0.458729283404541,0.143339583151451,0,0,0,1.0580536810308,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,0,0.23806443146374,2.77732312294826,1.05527014302958,0,0,0,0.435433495793923,0,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0.733448665097199,0,0,1.00636896795513,0 | |||
|short_description=p2@TARP | |||
}} |
Revision as of 16:37, 22 January 2014
Short description: | p2@TARP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TARP_5end |
Coexpression cluster: | C1996_Natural_CD8_NK_CD4_Peripheral_blood_Whole |
Association with transcript: | 289bp_to_uc003tge.1_5end |
EntrezGene: | TARP |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood | 1.99e-31 | 15 |
haemolymphatic fluid | 1.99e-31 | 15 |
organism substance | 1.99e-31 | 15 |
hematopoietic system | 1.34e-24 | 98 |
blood island | 1.34e-24 | 98 |
hemolymphoid system | 1.30e-21 | 108 |
hemopoietic organ | 7.38e-17 | 7 |
immune organ | 7.38e-17 | 7 |
thymus | 3.99e-14 | 4 |
hemolymphoid system gland | 3.99e-14 | 4 |
thymic region | 3.99e-14 | 4 |
pharyngeal gland | 3.99e-14 | 4 |
thymus primordium | 3.99e-14 | 4 |
lateral plate mesoderm | 1.38e-09 | 203 |
pharyngeal epithelium | 2.00e-09 | 6 |
immune system | 7.66e-08 | 93 |