FFCP PHASE1:Hg19::chr7:151574477..151574504,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51422 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9386 | |||
|TSSclassifier=weak | |||
|UniProt=Q9UGJ0,Q8NCK6 | |||
|association_with_transcript=-161bp_to_NM_016203,uc003wkk.2,uc003wkm.1,uc010lqe.1_5end | |||
|description=CAGE_peak_11_at_PRKAG2_5end | |||
|id=chr7:151574477..151574504,- | |||
|ontology_enrichment_celltype=CL:0000738!4.31e-43!140;CL:0002087!6.96e-41!119;CL:0002031!2.54e-39!124;CL:0000037!8.23e-37!172;CL:0000566!8.23e-37!172;CL:0002032!4.17e-35!165;CL:0000837!4.17e-35!165;CL:0000988!5.55e-34!182;CL:0000557!8.26e-30!71;CL:0002009!8.71e-29!65;CL:0000766!6.01e-28!76;CL:0002194!6.84e-28!63;CL:0000576!6.84e-28!63;CL:0000040!6.84e-28!63;CL:0000559!6.84e-28!63;CL:0000839!1.48e-26!70;CL:0002057!1.17e-25!42;CL:0000860!5.66e-25!45;CL:0000763!1.06e-22!112;CL:0000049!1.06e-22!112;CL:0000791!1.21e-12!18;CL:0000789!1.21e-12!18;CL:0002420!1.21e-12!18;CL:0002419!1.21e-12!18;CL:0000790!1.21e-12!18;CL:0000838!8.42e-12!52;CL:0000542!2.72e-11!53;CL:0000051!2.72e-11!53;CL:0000084!2.91e-11!25;CL:0000827!2.91e-11!25;CL:0000625!2.97e-09!11;CL:0002393!7.79e-07!9;CL:0002397!7.79e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.22e-25;33!CL:0002057;2.22e-25;33!CL:0000576;8.06e-24;48!CL:0000473;3.93e-22;39!CL:0000234;3.93e-22;39!CL:0000791;2.14e-18;18!CL:0000789;2.14e-18;18!CL:0002419;2.14e-18;18!CL:0000766;7.00e-17;69!CL:0002087;3.26e-16;104!CL:0000084;3.78e-14;25!CL:0000625;5.50e-13;11!CL:0000738;7.91e-13;136!CL:0000542;1.22e-09;53!CL:0000624;1.66e-08;6!CL:0000988;2.10e-08;177!CL:0000763;7.39e-08;100!CL:0002393;3.21e-07;6!CL:0002397;3.21e-07;6!CL:0000236;3.43e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.19e-58,136;CL:0002087,7.51e-57,115;CL:0002031,1.90e-55,120;CL:0000037,3.01e-48,168;CL:0002032,5.20e-46,161;CL:0000837,5.20e-46,161;CL:0000988,5.22e-44,177;CL:0000557,1.95e-42,67;CL:0002009,2.74e-40,61;CL:0002194,5.81e-39,59;CL:0000576,5.81e-39,59;CL:0000040,5.81e-39,59;CL:0000559,5.81e-39,59;CL:0000766,2.11e-38,72;CL:0000839,3.58e-38,66;CL:0000473,3.28e-36,48;CL:0000234,3.28e-36,48;CL:0000860,4.54e-36,42;CL:0002057,4.54e-36,42;CL:0000763,7.05e-29,108;CL:0000049,7.05e-29,108;CL:0000791,2.04e-18,18;CL:0000789,2.04e-18,18;CL:0002420,2.04e-18,18;CL:0002419,2.04e-18,18;CL:0000790,2.04e-18,18;CL:0000838,1.18e-15,52;CL:0000542,3.78e-15,53;CL:0000051,3.78e-15,53;CL:0000084,6.91e-14,25;CL:0000827,6.91e-14,25;CL:0000625,5.56e-13,11;CL:0002393,2.12e-09,9;CL:0002397,2.12e-09,9;CL:0000134,7.93e-09,354;CL:0000624,1.56e-08,6;CL:0002320,3.72e-08,361;CL:0000990,8.10e-07,8;CL:0000219,9.33e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;5.88e-26;42!CL:0000790;2.14e-18;18!CL:0000051;1.22e-09;53!CL:0000049;8.41e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.25e-32!102;UBERON:0003061!6.25e-32!102;UBERON:0002193!5.10e-28!112;UBERON:0002371!3.07e-24!80;UBERON:0007023!2.03e-23!115;UBERON:0001474!9.26e-23!86;UBERON:0002405!1.44e-17!115;UBERON:0004765!1.34e-16!101;UBERON:0001434!1.34e-16!101;UBERON:0000178!5.32e-08!15;UBERON:0000179!5.32e-08!15;UBERON:0000463!5.32e-08!15;UBERON:0001049!5.37e-08!57;UBERON:0005068!5.37e-08!57;UBERON:0006241!5.37e-08!57;UBERON:0007135!5.37e-08!57;UBERON:0001893!1.48e-07!34;UBERON:0003080!2.18e-07!42;UBERON:0002020!2.39e-07!34;UBERON:0003528!2.39e-07!34;UBERON:0001869!3.23e-07!32;UBERON:0002780!3.47e-07!41;UBERON:0001890!3.47e-07!41;UBERON:0006240!3.47e-07!41;UBERON:0002791!3.51e-07!33 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.14e-07;15!UBERON:0000179;3.14e-07;15!UBERON:0000463;3.14e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.98e-42,98;UBERON:0003061,2.98e-42,98;UBERON:0002193,9.35e-39,108;UBERON:0002371,2.83e-36,76;UBERON:0002405,3.78e-32,93;UBERON:0001474,4.05e-32,82;UBERON:0004765,1.79e-27,90;UBERON:0001434,1.16e-23,100;UBERON:0007023,1.86e-10,114;UBERON:0003081,2.13e-10,203;UBERON:0002204,3.78e-08,167;UBERON:0002384,1.45e-07,371;UBERON:0000178,3.14e-07,15;UBERON:0000179,3.14e-07,15;UBERON:0000463,3.14e-07,15;UBERON:0001869,3.96e-07,32;UBERON:0001893,3.98e-07,34;UBERON:0002791,5.34e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0.313454721478088,0,0,0,0,0,0,0.393364276848904,2.68680578668049,3.2511385896376,0,0,0,0,0,1.17440175733939,3.87796785972314,6.41742231904453,9.76548918221333,2.46307021663917,3.88672399222775,2.83333124397605,3.34415949192999,3.02300754951048,3.88134497900506,2.78914844286822,4.11167888021826,3.09706370895104,1.1507695692886,1.7931249457037,2.83778675866302,5.5159308917859,5.16387746867061,2.70852973188684,2.63539275359647,2.45615535052061,1.79778787556068,2.44867113896722,4.49300637906531,5.11469700639233,3.29851300186716,2.99195486432448,2.13112375266347,5.22376629531451,1.13477044938228,1.24564449799115,1.7587406567972,2.60741459210101,2.38907729175628,0.605399502633369,1.47311054395026,1.58231193720442,2.5350634357433,2.33864729961548,1.88692780957538,5.50410292617826,4.05477610672067,3.2145117339416,2.56511469367124,1.19350006319454,2.55729815270488,1.75996244461323,3.82297027883492,0.889509253863555,2.56038133539904,2.40237592221607,2.29900975981793,1.98313461835459,1.90810750907073,5.12291672198504,8.80855784056408,5.3518251937532,3.96513985737078,0,0,5.50787356318733,6.6811829667358,6.16804496998528,1.17030546773475,8.14805666583976,3.31413464014313,5.84480185223734,0.445641827540694,2.65145316727353,1.32920336750173,3.79125409271022,0.768547918354051,0.780356085359269,0.657751618414705,1.65810010671509,0.289803085735052,6.82118190545478,5.61835738988397,3.1360657141493,0.226618685395132,5.74830740402882,2.40539211837841,4.55435445635105,4.14135038621326,3.90650072313851,3.8018081777935,5.57127940587759,4.35154477925022,1.24930726552346,3.55165878066025,4.10563998460523,4.03213486449465,4.01160293675261,7.38604459802275,0,0,0,0,0,0,0,0,0,0,0,1.11332214173056,0,0,2.92092654289215,3.48259474598534,2.92507513141503,1.66943437013739,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0.207322110030741,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0,0.220587945464788,0.217879444092406,0,0,0.196221465125346,0,0,0,0,0,2.53510069643662,1.96565443335525,1.77236972004421,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,1.96973604869918,0.702012795417713,1.18904929830983,0,0,0,0,0,0,0,0,2.28060927094849,3.60299883542404,4.4184851699233,0.253991577168676,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00451418286425,2.10833939483032,0,0,0,0,0,0,0,3.54655368363469,4.74380664690938,5.90377966886842,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.06395301879261,6.90285442619574,5.54983300577911,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.366277859273374,0.660075999364704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,1.69458841398202,0,0,0,0,3.55213326462519,0.764637207142375,3.41788312304498,2.62054953003568,5.75907182320672,3.8908398671563,5.40031437238115,3.17250070517708,0,0,0,0,0.28853842595289,0,0.637705090915289,0,0.191505370132367,0.423347165447766,0.973865820823666,1.40398589056729,1.14117339516596,1.41011906195721,0,0,0.963528450622197,1.00899853595524,0,0,0.614481528616916,1.11838053946208,0.500547425135725,0.390776190804081,0,0,0.270455678475983,0,0,0.18714054040822,0.73254089635947,0,1.00299045849731,0.568272293612826,0,0,0,2.98244294329889,1.68803299692615,0,0.16480387422676,0,0.597743964753209,3.86797481743607,1.0077309914171,0,0.123084805461069,0,0,0,1.02314474045374,0.591860433821602,0,0,3.87733098438087,0.649376687132959,0,0.520855522170466,0.437299999980979,0.724999575434793,0.455173793141999,0.254253650292766,0.236387681767936,1.72371686620732,0.291604613383254,0,1.77148277162768,1.4471572635049,0,0.884634079449797,0.295547618953547,0.658156191461918,0.544692317594951,0,1.00035336054936,0,0.69169171316418,0.269272933229316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98578579323551,1.59223616106011,2.4441205797345,0.296521128680622,0.617819694732514,0.835375596043643,0.269604531922708,0.802577647298789,0.702793337176017,0,0.19566461893209,0.728341138602278,1.18375320854817,2.41981432097328,0.30607276163049,1.01098527405581,0,0,0.664653872707185,0.661983911750998,0.627865836814451,0,0,0,0,0,0.0870592065804026,0.52418000472609,0,0.0967563312890851,0.146178634172371,0.164230914106418,0.678923115418936,0,0.451961481561065,0,0,1.07628353124994,0,0,0.640358984218058,0.19980960958213,0.432271251462318,0.458146384663663,0.514784993585894,0,0.372757606696298,0.235694034616795,0,0,0,0,1.80126086612937,0.958337652243951,5.10986352267889,0,1.05154941711726,0.558564802544508,0.458320848023367,0.717873024576814,0,1.28767814440971,0,0.671834724867263,0,0,0,0,0,0,0,3.180918759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| |||
|short_description=p11@PRKAG2 | |||
}} |
Revision as of 20:12, 22 January 2014
Short description: | p11@PRKAG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_PRKAG2_5end |
Coexpression cluster: | NA |
Association with transcript: | -161bp_to_NM_016203, uc003wkk.2, uc003wkm.1, uc010lqe.1_5end |
EntrezGene: | PRKAG2 |
HGNC: | 9386 |
UniProt: | Q9UGJ0Q8NCK6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.98e-42 | 98 |
blood island | 2.98e-42 | 98 |
hemolymphoid system | 9.35e-39 | 108 |
bone marrow | 2.83e-36 | 76 |
immune system | 3.78e-32 | 93 |
bone element | 4.05e-32 | 82 |
skeletal element | 1.79e-27 | 90 |
skeletal system | 1.16e-23 | 100 |
adult organism | 1.86e-10 | 114 |
lateral plate mesoderm | 2.13e-10 | 203 |
musculoskeletal system | 3.78e-08 | 167 |
connective tissue | 1.45e-07 | 371 |
blood | 3.14e-07 | 15 |
haemolymphatic fluid | 3.14e-07 | 15 |
organism substance | 3.14e-07 | 15 |
cerebral hemisphere | 3.96e-07 | 32 |
telencephalon | 3.98e-07 | 34 |
regional part of telencephalon | 5.34e-07 | 32 |