FFCP PHASE1:Hg19::chr8:126448677..126448695,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10221 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=16891 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=15bp_to_BC012441_5end | |||
|coexpression_cluster_id=C13 | |||
|description=CAGE_peak_14_at_TRIB1_5end | |||
|id=chr8:126448677..126448695,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.54e-32!42;CL:0000860!6.13e-29!45;CL:0002009!8.08e-23!65;CL:0000766!9.29e-22!76;CL:0002194!2.36e-21!63;CL:0000576!2.36e-21!63;CL:0000040!2.36e-21!63;CL:0000559!2.36e-21!63;CL:0000557!2.66e-19!71;CL:0000839!1.92e-17!70;CL:0000763!4.87e-15!112;CL:0000049!4.87e-15!112;CL:0000738!3.73e-14!140;CL:0002087!1.94e-11!119;CL:0002031!2.05e-10!124;CL:0002032!1.27e-09!165;CL:0000837!1.27e-09!165;CL:0000037!2.42e-09!172;CL:0000566!2.42e-09!172;CL:0000988!2.87e-09!182;CL:0002393!2.17e-07!9;CL:0002397!2.17e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.07e-68;33!CL:0002057;7.07e-68;33!CL:0000473;4.75e-46;39!CL:0000234;4.75e-46;39!CL:0000576;1.30e-36;48!CL:0000766;7.88e-30;69!CL:0000775;1.45e-18;3!CL:0000094;7.11e-12;8!CL:0000763;1.85e-11;100!CL:0000081;1.17e-08;11!CL:0000738;4.02e-08;136!CL:0002087;7.00e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.83e-66,42;CL:0002057,6.83e-66,42;CL:0000473,4.77e-57,48;CL:0000234,4.77e-57,48;CL:0000766,6.87e-51,72;CL:0002009,3.40e-47,61;CL:0002194,1.16e-44,59;CL:0000576,1.16e-44,59;CL:0000040,1.16e-44,59;CL:0000559,1.16e-44,59;CL:0000557,1.39e-42,67;CL:0000839,1.76e-39,66;CL:0000763,5.21e-35,108;CL:0000049,5.21e-35,108;CL:0000738,1.09e-26,136;CL:0002031,1.07e-21,120;CL:0002032,1.09e-21,161;CL:0000837,1.09e-21,161;CL:0002087,1.01e-20,115;CL:0000037,1.49e-20,168;CL:0000988,3.19e-19,177;CL:0000775,1.45e-18,3;CL:0000094,8.30e-12,8;CL:0000134,4.03e-10,354;CL:0002320,8.39e-10,361;CL:0000219,1.11e-08,386;CL:0000081,1.31e-08,11;CL:0000048,4.40e-08,427;CL:0000723,7.00e-08,433;CL:0000034,1.28e-07,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.71e-47;42!CL:0000049;2.20e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.05e-16!80;UBERON:0001474!9.95e-16!86;UBERON:0002390!1.96e-15!102;UBERON:0003061!1.96e-15!102;UBERON:0002193!2.73e-14!112;UBERON:0002405!1.08e-12!115;UBERON:0004765!5.01e-12!101;UBERON:0001434!5.01e-12!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.18e-37,76;UBERON:0001474,5.73e-34,82;UBERON:0004765,1.56e-30,90;UBERON:0002405,2.14e-29,93;UBERON:0002390,1.18e-27,98;UBERON:0003061,1.18e-27,98;UBERON:0001434,5.26e-27,100;UBERON:0002193,1.20e-24,108;UBERON:0002204,3.76e-17,167;UBERON:0003081,1.58e-14,203;UBERON:0002384,2.28e-09,371;UBERON:0000926,4.48e-09,315;UBERON:0004120,4.48e-09,315;UBERON:0006603,4.48e-09,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0.247532705920093,0,0,0,1.46062018077475,0,0,0,0,0.286235987131057,0,0,0,0,0,1.18009283054671,0.383829398097213,0.619264493264304,0,0,0,0.154934401160603,0.142169232487422,0,0.553995408531877,1.20326668482085,1.30206522429511,0.447830948479849,0,0,1.01778767145695,0,1.21292030593908,1.85943229524548,1.6446715520873,1.85823822537062,5.75384784644301,3.07392847834921,6.3850202069918,2.06847408441971,2.5819387343353,0,1.50593871634084,0.818718450173537,0.898893937780338,3.36692281607993,0.641858054152187,3.19668562899521,0.659702600373432,3.19141852194611,1.70489900213078,0.870627715885752,1.13477044938228,1.86846674698672,9.2962006144995,5.21482918420201,8.25317609879443,0.605399502633369,0.368277635987565,1.58231193720442,0.422510572623884,0.850417199860174,0.209658645508376,0.673971786878971,0.600707571366025,0.16072558669708,0.285012743741249,0.59675003159727,0.182664153764634,0,0.546138611262131,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0.221533894583621,0.270803863765016,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0.378139268656271,0.665188192387692,0.087834785693126,0,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0.39752481473341,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226864366320042,0.179389635688862,0,0,0,0,0,0.18611685633159,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.243947412259191,0.132529768321485,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0.219500570817251,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0.144366447761074,0,0,0,0.858486162094873,0,0,0.148631162288728,0,0,0,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0.502257091432126,0,0,0,0,0,0.205476322550383,0,0,0,0,0.128343036279748,0,0,0.773288812777695,0,0,7.49007023947182,20.9413021442817,4.55857064779639,0,0,0,0,0.178428988797162,0.157702415033935,0,0,0,0,0,0.184369168541703,0,0,0,0,0.215714200818617,0.533637789017222,0.303127571446259,1.66435439510497,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0.200506470303285,0.184161977871793,0,0.182091168006717,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.340187410553031,0,0,0,0,0,0.831076008928724,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0.165284915360978,0,0,0.2023155617111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35667105148125,0,0.211107635297664,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0.43050537267123,0,0.443430153536676,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.47003968731907,0,0.169291777801603,0,0,0,0.343505344755765,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.222886768554957,0,2.14870036263921,0.296964680832639,0.614321404198464,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0.537063524026827,0,0.197286811273867,0,0,0.969332746095218,0,0,0.260427761085233,0,0.724999575434793,0.1137934482855,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0.108647371922008,1.91400695839152,0.183195186803725,0.533034776018635,0,0,0,0,0.19606253431774,0,0,0,0.421996129056054,0.163232808159148,0.141353071433941,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0,0.364909578431332,0,0,0,0,0,0,0,0.103688191397247,0,0.330991955875499,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.193978032976839,0,0,0,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0.14405479798815,0.372757606696298,0.235694034616795,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0.279282401272254,0,0.717873024576814,0,0,0,0,0,0,0.315132729228895,0.164831716762333,0.13480708770837,0.0984274815147488,0,0,0.136203406111576,0.643012593860077,0.550157746388935,0.415440338029185,0.449947783103001,2.32140586367385,0.0607495566580247,0.335434687599266,0.315222829196793,0.0524545881349981,0,0.537862017998534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0.78602152549833,0,0.496166021811951,0.197611631897944,0,0,0,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,0,0.573409195690071,0.110929051536852,0,0.415045904808692,0.124980407962107,0.303298235083296,0,0.941063278792687,0.468334905806882,0,0.149254802886874,0,0,0,0.251567901752575,0,0,0.151230923763239,0,0,0,0,0.310525913752519,0,0,1.04349012362347,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0.179088841081487,0,0,0.176689145945881,0,0.168942440653073,0,0,0,0,0.194860308839388,0.930053882193542,0.817826971279221,0.327609848846413,0.491545817507439,0,0.39997479170986,0,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0.33946505990805,0.2125749201016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| |||
|short_description=p14@TRIB1 | |||
}} |
Revision as of 23:43, 22 January 2014
Short description: | p14@TRIB1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_TRIB1_5end |
Coexpression cluster: | C13_Neutrophils_Eosinophils_CD14_Monocytederived_Whole_Peripheral_CD4 |
Association with transcript: | 15bp_to_BC012441_5end |
EntrezGene: | TRIB1 |
HGNC: | 16891 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 6.83e-66 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.83e-66 | 42 |
defensive cell | 4.77e-57 | 48 |
phagocyte | 4.77e-57 | 48 |
myeloid leukocyte | 6.87e-51 | 72 |
macrophage dendritic cell progenitor | 3.40e-47 | 61 |
monopoietic cell | 1.16e-44 | 59 |
monocyte | 1.16e-44 | 59 |
monoblast | 1.16e-44 | 59 |
promonocyte | 1.16e-44 | 59 |
granulocyte monocyte progenitor cell | 1.39e-42 | 67 |
myeloid lineage restricted progenitor cell | 1.76e-39 | 66 |
myeloid cell | 5.21e-35 | 108 |
common myeloid progenitor | 5.21e-35 | 108 |
leukocyte | 1.09e-26 | 136 |
hematopoietic lineage restricted progenitor cell | 1.07e-21 | 120 |
hematopoietic oligopotent progenitor cell | 1.09e-21 | 161 |
hematopoietic multipotent progenitor cell | 1.09e-21 | 161 |
nongranular leukocyte | 1.01e-20 | 115 |
hematopoietic stem cell | 1.49e-20 | 168 |
hematopoietic cell | 3.19e-19 | 177 |
neutrophil | 1.45e-18 | 3 |
granulocyte | 8.30e-12 | 8 |
mesenchymal cell | 4.03e-10 | 354 |
connective tissue cell | 8.39e-10 | 361 |
motile cell | 1.11e-08 | 386 |
blood cell | 1.31e-08 | 11 |
multi fate stem cell | 4.40e-08 | 427 |
somatic stem cell | 7.00e-08 | 433 |
stem cell | 1.28e-07 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.18e-37 | 76 |
bone element | 5.73e-34 | 82 |
skeletal element | 1.56e-30 | 90 |
immune system | 2.14e-29 | 93 |
hematopoietic system | 1.18e-27 | 98 |
blood island | 1.18e-27 | 98 |
skeletal system | 5.26e-27 | 100 |
hemolymphoid system | 1.20e-24 | 108 |
musculoskeletal system | 3.76e-17 | 167 |
lateral plate mesoderm | 1.58e-14 | 203 |
connective tissue | 2.28e-09 | 371 |
mesoderm | 4.48e-09 | 315 |
mesoderm-derived structure | 4.48e-09 | 315 |
presumptive mesoderm | 4.48e-09 | 315 |