FFCP PHASE1:Hg19::chr10:100206067..100206107,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:100206067..100206107,+ to FFCP PHASE1:Hg19::chr10:100206067..100206107,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:100206067..100206107,+ | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_at_chr10:100206067..100206107,+ | |||
|id=chr10:100206067..100206107,+ | |||
|ontology_enrichment_celltype=CL:0002057!3.22e-18!42;CL:0002009!4.85e-18!65;CL:0002194!5.88e-17!63;CL:0000576!5.88e-17!63;CL:0000040!5.88e-17!63;CL:0000559!5.88e-17!63;CL:0000557!1.76e-16!71;CL:0000839!2.56e-16!70;CL:0000763!1.50e-15!112;CL:0000049!1.50e-15!112;CL:0000860!1.80e-15!45;CL:0000766!2.03e-15!76;CL:0002032!5.45e-07!165;CL:0000837!5.45e-07!165 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.41e-23;33!CL:0002057;8.41e-23;33!CL:0000473;2.34e-18;39!CL:0000234;2.34e-18;39!CL:0000576;1.09e-13;48!CL:0000766;2.90e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,9.88e-23,61;CL:0002194,2.35e-21,59;CL:0000576,2.35e-21,59;CL:0000040,2.35e-21,59;CL:0000559,2.35e-21,59;CL:0000860,5.53e-21,42;CL:0002057,5.53e-21,42;CL:0000473,1.10e-20,48;CL:0000234,1.10e-20,48;CL:0000557,2.16e-20,67;CL:0000766,1.05e-19,72;CL:0000839,2.45e-19,66;CL:0000763,9.20e-17,108;CL:0000049,9.20e-17,108;CL:0002031,7.30e-08,120;CL:0002032,1.06e-07,161;CL:0000837,1.06e-07,161;CL:0000738,5.79e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;5.52e-16;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.64e-13!80;UBERON:0001474!4.48e-11!86;UBERON:0004765!1.21e-10!101;UBERON:0001434!1.21e-10!101;UBERON:0002405!1.80e-10!115;UBERON:0001049!7.31e-09!57;UBERON:0005068!7.31e-09!57;UBERON:0006241!7.31e-09!57;UBERON:0007135!7.31e-09!57;UBERON:0003081!1.54e-08!216;UBERON:0002204!1.79e-08!167;UBERON:0002390!2.12e-08!102;UBERON:0003061!2.12e-08!102;UBERON:0001869!2.87e-08!32;UBERON:0002193!3.19e-08!112;UBERON:0002020!4.23e-08!34;UBERON:0003528!4.23e-08!34;UBERON:0002616!5.41e-08!59;UBERON:0002780!1.67e-07!41;UBERON:0001890!1.67e-07!41;UBERON:0006240!1.67e-07!41;UBERON:0001893!2.97e-07!34;UBERON:0002619!4.78e-07!22;UBERON:0002791!6.17e-07!33;UBERON:0003080!6.89e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.73e-08;22!UBERON:0001869;5.36e-08;32!UBERON:0003528;6.61e-08;34!UBERON:0002020;6.61e-08;34!UBERON:0001950;1.56e-07;20!UBERON:0002791;3.44e-07;32!UBERON:0001893;6.67e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.41e-17,76;UBERON:0001474,3.94e-15,82;UBERON:0002405,1.07e-14,93;UBERON:0004765,8.95e-14,90;UBERON:0001434,5.18e-13,100;UBERON:0000073,1.49e-11,53;UBERON:0002616,1.49e-11,53;UBERON:0003081,1.98e-11,203;UBERON:0001049,2.10e-11,56;UBERON:0005068,2.10e-11,56;UBERON:0006241,2.10e-11,56;UBERON:0007135,2.10e-11,56;UBERON:0002390,1.00e-10,98;UBERON:0003061,1.00e-10,98;UBERON:0002193,2.83e-10,108;UBERON:0001869,1.15e-09,32;UBERON:0003528,1.34e-09,34;UBERON:0002020,1.34e-09,34;UBERON:0002619,3.49e-09,22;UBERON:0002204,5.28e-09,167;UBERON:0002791,1.12e-08,32;UBERON:0002780,1.26e-08,41;UBERON:0001890,1.26e-08,41;UBERON:0003080,1.26e-08,41;UBERON:0006240,1.26e-08,41;UBERON:0001893,1.58e-08,34;UBERON:0001950,2.80e-08,20;UBERON:0000955,6.83e-08,68;UBERON:0006238,6.83e-08,68;UBERON:0000956,3.19e-07,25;UBERON:0000203,3.19e-07,25;UBERON:0003075,6.53e-07,82;UBERON:0007284,6.53e-07,82;UBERON:0001017,7.12e-07,81 | |||
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| ||
|short_description=p@chr10:100206067..100206107,+ | |||
}} | }} |
Latest revision as of 09:22, 23 July 2015
Short description: | p@chr10:100206067..100206107, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:100206067..100206107, + |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 9.88e-23 | 61 |
monopoietic cell | 2.35e-21 | 59 |
monocyte | 2.35e-21 | 59 |
monoblast | 2.35e-21 | 59 |
promonocyte | 2.35e-21 | 59 |
classical monocyte | 5.53e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.53e-21 | 42 |
defensive cell | 1.10e-20 | 48 |
phagocyte | 1.10e-20 | 48 |
granulocyte monocyte progenitor cell | 2.16e-20 | 67 |
myeloid leukocyte | 1.05e-19 | 72 |
myeloid lineage restricted progenitor cell | 2.45e-19 | 66 |
myeloid cell | 9.20e-17 | 108 |
common myeloid progenitor | 9.20e-17 | 108 |
hematopoietic lineage restricted progenitor cell | 7.30e-08 | 120 |
hematopoietic oligopotent progenitor cell | 1.06e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.06e-07 | 161 |
leukocyte | 5.79e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.41e-17 | 76 |
bone element | 3.94e-15 | 82 |
immune system | 1.07e-14 | 93 |
skeletal element | 8.95e-14 | 90 |
skeletal system | 5.18e-13 | 100 |
regional part of nervous system | 1.49e-11 | 53 |
regional part of brain | 1.49e-11 | 53 |
lateral plate mesoderm | 1.98e-11 | 203 |
neural tube | 2.10e-11 | 56 |
neural rod | 2.10e-11 | 56 |
future spinal cord | 2.10e-11 | 56 |
neural keel | 2.10e-11 | 56 |
hematopoietic system | 1.00e-10 | 98 |
blood island | 1.00e-10 | 98 |
hemolymphoid system | 2.83e-10 | 108 |
cerebral hemisphere | 1.15e-09 | 32 |
brain grey matter | 1.34e-09 | 34 |
gray matter | 1.34e-09 | 34 |
regional part of cerebral cortex | 3.49e-09 | 22 |
musculoskeletal system | 5.28e-09 | 167 |
regional part of telencephalon | 1.12e-08 | 32 |
regional part of forebrain | 1.26e-08 | 41 |
forebrain | 1.26e-08 | 41 |
anterior neural tube | 1.26e-08 | 41 |
future forebrain | 1.26e-08 | 41 |
telencephalon | 1.58e-08 | 34 |
neocortex | 2.80e-08 | 20 |
brain | 6.83e-08 | 68 |
future brain | 6.83e-08 | 68 |
cerebral cortex | 3.19e-07 | 25 |
pallium | 3.19e-07 | 25 |
neural plate | 6.53e-07 | 82 |
presumptive neural plate | 6.53e-07 | 82 |
central nervous system | 7.12e-07 | 81 |