FFCP PHASE1:Hg19::chr10:104393374..104393395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:104393374..104393395,+ | |||
|description=CAGE_peak_at_chr10:104393374..104393395,+ | |description=CAGE_peak_at_chr10:104393374..104393395,+ | ||
|id=chr10:104393374..104393395,+ | |id=chr10:104393374..104393395,+ | ||
|ontology_enrichment_celltype=CL:0002057!3.79e-21!42;CL:0000860!3.08e-19!45;CL:0002393!5.44e-19!9;CL:0002397!5.44e-19!9;CL:0000222!4.54e-15!119;CL:0000766!9.07e-15!76;CL:0002194!1.11e-13!63;CL:0000576!1.11e-13!63;CL:0000040!1.11e-13!63;CL:0000559!1.11e-13!63;CL:0002009!4.88e-13!65;CL:0000071!6.04e-13!18;CL:0002546!6.04e-13!18;CL:0000144!1.05e-11!625;CL:0000359!1.20e-11!32;CL:0000839!1.33e-11!70;CL:0000557!2.44e-11!71;CL:0002371!1.07e-10!591;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000048!3.95e-10!430;CL:0000213!4.71e-10!57;CL:0000215!4.71e-10!57;CL:0000080!5.16e-10!6;CL:0000723!1.04e-09!436;CL:0000548!3.38e-09!679;CL:0000004!3.38e-09!679;CL:0000255!3.38e-09!679;CL:0000034!3.58e-09!444;CL:0000192!4.78e-09!42;CL:0000514!4.78e-09!42;CL:0000012!4.86e-09!682;CL:0002139!5.92e-09!24;CL:0000115!8.29e-09!35;CL:0000187!9.87e-08!54;CL:0000003!1.20e-07!722;CL:0002543!1.37e-07!6;CL:0000875!1.41e-07!3;CL:0002396!1.41e-07!3;CL:0000183!1.48e-07!59;CL:1000413!1.56e-07!9;CL:0000988!1.76e-07!182;CL:0000738!2.23e-07!140;CL:0002087!3.99e-07!119;CL:0000680!4.42e-07!57;CL:0000056!4.42e-07!57;CL:0000355!4.42e-07!57 | |ontology_enrichment_celltype=CL:0002057!3.79e-21!42;CL:0000860!3.08e-19!45;CL:0002393!5.44e-19!9;CL:0002397!5.44e-19!9;CL:0000222!4.54e-15!119;CL:0000766!9.07e-15!76;CL:0002194!1.11e-13!63;CL:0000576!1.11e-13!63;CL:0000040!1.11e-13!63;CL:0000559!1.11e-13!63;CL:0002009!4.88e-13!65;CL:0000071!6.04e-13!18;CL:0002546!6.04e-13!18;CL:0000144!1.05e-11!625;CL:0000359!1.20e-11!32;CL:0000839!1.33e-11!70;CL:0000557!2.44e-11!71;CL:0002371!1.07e-10!591;CL:0000763!2.25e-10!112;CL:0000049!2.25e-10!112;CL:0000048!3.95e-10!430;CL:0000213!4.71e-10!57;CL:0000215!4.71e-10!57;CL:0000080!5.16e-10!6;CL:0000723!1.04e-09!436;CL:0000548!3.38e-09!679;CL:0000004!3.38e-09!679;CL:0000255!3.38e-09!679;CL:0000034!3.58e-09!444;CL:0000192!4.78e-09!42;CL:0000514!4.78e-09!42;CL:0000012!4.86e-09!682;CL:0002139!5.92e-09!24;CL:0000115!8.29e-09!35;CL:0000187!9.87e-08!54;CL:0000003!1.20e-07!722;CL:0002543!1.37e-07!6;CL:0000875!1.41e-07!3;CL:0002396!1.41e-07!3;CL:0000183!1.48e-07!59;CL:1000413!1.56e-07!9;CL:0000988!1.76e-07!182;CL:0000738!2.23e-07!140;CL:0002087!3.99e-07!119;CL:0000680!4.42e-07!57;CL:0000056!4.42e-07!57;CL:0000355!4.42e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002393;4.16e-38;6!CL:0002397;4.16e-38;6!CL:0000875;2.25e-28;3!CL:0002396;2.25e-28;3!CL:0000511;2.50e-10;1!CL:0002625;2.50e-10;1!CL:0000216;2.50e-10;1!CL:0000576;3.83e-08;48!CL:0000766;5.13e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,2.09e-64,9;CL:0002397,2.09e-64,9;CL:0000875,1.18e-28,3;CL:0002396,1.18e-28,3;CL:0000860,1.96e-16,42;CL:0002057,1.96e-16,42;CL:0000473,3.18e-14,48;CL:0000234,3.18e-14,48;CL:0000766,2.26e-13,72;CL:0002194,3.97e-11,59;CL:0000576,3.97e-11,59;CL:0000040,3.97e-11,59;CL:0000559,3.97e-11,59;CL:0002009,9.98e-11,61;CL:0000511,1.57e-10,1;CL:0002625,1.57e-10,1;CL:0000216,1.57e-10,1;CL:0000839,7.84e-10,66;CL:0000557,1.14e-09,67;CL:0000763,2.21e-08,108;CL:0000049,2.21e-08,108;CL:0000738,1.30e-07,136 | |||
|ontology_enrichment_development_v019=CL:0002057;6.51e-11;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.95e-28!216;UBERON:0004535!7.54e-22!110;UBERON:0001009!6.37e-21!113;UBERON:0004872!2.51e-19!84;UBERON:0001981!5.02e-19!60;UBERON:0007500!5.02e-19!60;UBERON:0004537!5.02e-19!60;UBERON:0006965!5.02e-19!60;UBERON:0001637!1.89e-18!42;UBERON:0003509!1.89e-18!42;UBERON:0004572!1.89e-18!42;UBERON:0000055!8.00e-17!69;UBERON:0002049!7.26e-16!79;UBERON:0007798!7.26e-16!79;UBERON:0003914!2.17e-15!118;UBERON:0002204!5.76e-13!167;UBERON:0001986!6.04e-13!18;UBERON:0004638!6.04e-13!18;UBERON:0004852!6.04e-13!18;UBERON:0004573!6.28e-13!33;UBERON:0004571!6.28e-13!33;UBERON:0000487!4.34e-12!22;UBERON:0002390!5.82e-12!102;UBERON:0003061!5.82e-12!102;UBERON:0002193!5.49e-11!112;UBERON:0006914!3.13e-10!25;UBERON:0002371!3.56e-10!80;UBERON:0000926!1.17e-09!448;UBERON:0004120!1.17e-09!448;UBERON:0006603!1.17e-09!448;UBERON:0001474!5.59e-09!86;UBERON:0000490!8.61e-08!138;UBERON:0003915!1.56e-07!9;UBERON:0004700!1.56e-07!9;UBERON:0001917!1.56e-07!9;UBERON:0004765!2.74e-07!101;UBERON:0001434!2.74e-07!101;UBERON:0002405!6.36e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.50e-10;1!UBERON:0001343;2.50e-10;1!UBERON:0004910;2.50e-10;1!UBERON:0004813;2.50e-10;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.26e-11,203;UBERON:0001136,1.57e-10,1;UBERON:0001343,1.57e-10,1;UBERON:0004910,1.57e-10,1;UBERON:0005154,1.57e-10,1;UBERON:0005295,1.57e-10,1;UBERON:0004813,1.57e-10,1;UBERON:0005297,1.57e-10,1;UBERON:0005294,1.57e-10,1;UBERON:0010141,1.57e-10,1;UBERON:0005891,1.57e-10,1;UBERON:0002371,2.17e-08,76;UBERON:0002390,9.78e-08,98;UBERON:0003061,9.78e-08,98;UBERON:0001474,1.09e-07,82;UBERON:0000926,2.14e-07,315;UBERON:0004120,2.14e-07,315;UBERON:0006603,2.14e-07,315;UBERON:0004765,6.66e-07,90;UBERON:0002193,6.90e-07,108 | |||
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|short_description=p@chr10:104393374..104393395,+ | |short_description=p@chr10:104393374..104393395,+ | ||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104393374..104393395, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104393374..104393395, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 2.09e-64 | 9 |
CD14-positive, CD16-positive monocyte | 2.09e-64 | 9 |
non-classical monocyte | 1.18e-28 | 3 |
CD14-low, CD16-positive monocyte | 1.18e-28 | 3 |
classical monocyte | 1.96e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.96e-16 | 42 |
defensive cell | 3.18e-14 | 48 |
phagocyte | 3.18e-14 | 48 |
myeloid leukocyte | 2.26e-13 | 72 |
monopoietic cell | 3.97e-11 | 59 |
monocyte | 3.97e-11 | 59 |
monoblast | 3.97e-11 | 59 |
promonocyte | 3.97e-11 | 59 |
macrophage dendritic cell progenitor | 9.98e-11 | 61 |
androgen binding protein secreting cell | 1.57e-10 | 1 |
seminiferous tubule epithelial cell | 1.57e-10 | 1 |
Sertoli cell | 1.57e-10 | 1 |
myeloid lineage restricted progenitor cell | 7.84e-10 | 66 |
granulocyte monocyte progenitor cell | 1.14e-09 | 67 |
myeloid cell | 2.21e-08 | 108 |
common myeloid progenitor | 2.21e-08 | 108 |
leukocyte | 1.30e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.26e-11 | 203 |
mesothelium | 1.57e-10 | 1 |
seminiferous tubule of testis | 1.57e-10 | 1 |
epithelium of male gonad | 1.57e-10 | 1 |
epithelial cord | 1.57e-10 | 1 |
sex cord | 1.57e-10 | 1 |
seminiferous tubule epithelium | 1.57e-10 | 1 |
testis sex cord | 1.57e-10 | 1 |
genital ridge | 1.57e-10 | 1 |
primitive sex cord of indifferent gonad | 1.57e-10 | 1 |
coelomic epithelium | 1.57e-10 | 1 |
bone marrow | 2.17e-08 | 76 |
hematopoietic system | 9.78e-08 | 98 |
blood island | 9.78e-08 | 98 |
bone element | 1.09e-07 | 82 |
mesoderm | 2.14e-07 | 315 |
mesoderm-derived structure | 2.14e-07 | 315 |
presumptive mesoderm | 2.14e-07 | 315 |
skeletal element | 6.66e-07 | 90 |
hemolymphoid system | 6.90e-07 | 108 |