FFCP PHASE1:Hg19::chr10:104403399..104403446,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:104403399..104403446,+ to FFCP PHASE1:Hg19::chr10:104403399..104403446,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:104403399..104403446,+ | |||
|description=CAGE_peak_at_chr10:104403399..104403446,+ | |||
|id=chr10:104403399..104403446,+ | |||
|ontology_enrichment_celltype=CL:0000222!2.30e-19!119;CL:0000055!1.28e-15!180;CL:0000183!6.26e-15!59;CL:0000187!1.01e-12!54;CL:0000192!2.63e-12!42;CL:0000514!2.63e-12!42;CL:0000680!3.01e-12!57;CL:0000056!3.01e-12!57;CL:0000355!3.01e-12!57;CL:0000359!2.64e-11!32;CL:0000220!3.06e-11!246;CL:0002321!6.44e-11!248;CL:0000393!5.15e-10!60;CL:0000211!5.15e-10!60;CL:0000057!4.52e-09!75;CL:1000449!1.29e-08!16;CL:1000497!2.62e-08!18;CL:0002518!2.62e-08!18;CL:1000507!3.66e-07!12;CL:1000494!3.66e-07!12;CL:0002681!7.47e-07!13;CL:0002584!7.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0000359;1.18e-10;32!CL:0000192;3.48e-09;43!CL:1000449;7.44e-09;15!CL:1000497;1.67e-08;17!CL:0002518;1.67e-08;17!CL:0002681;4.52e-07;12!CL:0002584;4.52e-07;12!CL:0000187;5.93e-07;55!CL:1000507;6.23e-07;10!CL:1000494;6.23e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.27e-20,121;CL:0000187,1.09e-12,55;CL:0000192,3.05e-12,43;CL:0000514,3.05e-12,43;CL:0000680,3.17e-12,58;CL:0000056,3.17e-12,58;CL:0000355,3.17e-12,58;CL:0000359,2.64e-11,32;CL:0002321,2.95e-11,250;CL:0000393,5.13e-10,61;CL:0000211,5.13e-10,61;CL:0000057,3.27e-09,76;CL:1000449,7.82e-09,15;CL:1000497,1.78e-08,17;CL:0002518,1.78e-08,17;CL:0002681,4.72e-07,12;CL:0002584,4.72e-07,12;CL:1000507,6.15e-07,10;CL:1000494,6.15e-07,10 | |||
|ontology_enrichment_development_v019=CL:0000514;3.48e-09;43!CL:0000355;4.66e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001637;2.39e-09;42!UBERON:0003509;2.39e-09;42!UBERON:0004572;2.39e-09;42!UBERON:0004573;5.10e-09;33!UBERON:0004571;5.10e-09;33!UBERON:0006555;7.44e-09;15!UBERON:0004819;7.44e-09;15!UBERON:0001285;7.44e-09;15!UBERON:0007684;7.44e-09;15!UBERON:0003914;1.27e-08;74!UBERON:0000353;1.71e-08;15!UBERON:0007500;6.66e-08;56!UBERON:0001981;6.66e-08;56!UBERON:0004537;6.66e-08;56!UBERON:0000055;2.41e-07;65!UBERON:0001225;4.52e-07;12!UBERON:0008987;4.52e-07;12!UBERON:0004211;6.23e-07;10!UBERON:0009773;6.23e-07;10!UBERON:0001231;6.23e-07;10!UBERON:0004810;6.23e-07;10 | |||
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| ||
|short_description=p@chr10:104403399..104403446,+ | |||
}} | }} |
Latest revision as of 09:50, 23 July 2015
Short description: | p@chr10:104403399..104403446, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104403399..104403446, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.27e-20 | 121 |
muscle cell | 1.09e-12 | 55 |
smooth muscle cell | 3.05e-12 | 43 |
smooth muscle myoblast | 3.05e-12 | 43 |
muscle precursor cell | 3.17e-12 | 58 |
myoblast | 3.17e-12 | 58 |
multi-potent skeletal muscle stem cell | 3.17e-12 | 58 |
vascular associated smooth muscle cell | 2.64e-11 | 32 |
embryonic cell | 2.95e-11 | 250 |
electrically responsive cell | 5.13e-10 | 61 |
electrically active cell | 5.13e-10 | 61 |
fibroblast | 3.27e-09 | 76 |
epithelial cell of nephron | 7.82e-09 | 15 |
kidney cell | 1.78e-08 | 17 |
kidney epithelial cell | 1.78e-08 | 17 |
kidney cortical cell | 4.72e-07 | 12 |
renal cortical epithelial cell | 4.72e-07 | 12 |
kidney tubule cell | 6.15e-07 | 10 |
nephron tubule epithelial cell | 6.15e-07 | 10 |