FFCP PHASE1:Hg19::chr10:104556220..104556247,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:104556220..104556247,- | |||
|coexpression_cluster_id=C92 | |||
|description=CAGE_peak_at_chr10:104556220..104556247,- | |||
|id=chr10:104556220..104556247,- | |||
|ontology_enrichment_celltype=CL:0002057!1.54e-59!42;CL:0000860!1.42e-54!45;CL:0000766!2.66e-54!76;CL:0000839!2.78e-48!70;CL:0000738!1.16e-47!140;CL:0000557!2.28e-47!71;CL:0000037!7.33e-45!172;CL:0000566!7.33e-45!172;CL:0000763!1.80e-44!112;CL:0000049!1.80e-44!112;CL:0002194!3.91e-44!63;CL:0000576!3.91e-44!63;CL:0000040!3.91e-44!63;CL:0000559!3.91e-44!63;CL:0002009!2.60e-42!65;CL:0000988!5.16e-41!182;CL:0002032!4.59e-40!165;CL:0000837!4.59e-40!165;CL:0002087!2.15e-37!119;CL:0002031!5.25e-36!124;CL:0000134!4.46e-16!358;CL:0002393!4.57e-16!9;CL:0002397!4.57e-16!9;CL:0002320!2.77e-15!365;CL:0000219!1.59e-12!390;CL:0000048!9.29e-10!430;CL:0000723!2.66e-09!436;CL:0000034!3.28e-09!444;CL:0002274!1.34e-07!5;CL:0000457!1.34e-07!5;CL:0002191!1.34e-07!5;CL:0000097!1.34e-07!5;CL:0000831!1.34e-07!5;CL:0002028!1.34e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.32e-70;33!CL:0002057;1.32e-70;33!CL:0000576;8.77e-62;48!CL:0000473;8.64e-51;39!CL:0000234;8.64e-51;39!CL:0000766;1.50e-47;69!CL:0002393;3.08e-22;6!CL:0002397;3.08e-22;6!CL:0000763;5.36e-20;100!CL:0002087;2.54e-15;104!CL:0000738;3.95e-13;136!CL:0000875;9.49e-13;3!CL:0002396;9.49e-13;3!CL:0000226;1.38e-11;3!CL:0000842;1.38e-11;3!CL:0000988;7.34e-10;177!CL:0000094;1.62e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.55e-107,42;CL:0002057,1.55e-107,42;CL:0000473,3.34e-98,48;CL:0000234,3.34e-98,48;CL:0000766,7.04e-93,72;CL:0000839,1.39e-83,66;CL:0000557,3.27e-82,67;CL:0002194,6.08e-81,59;CL:0000576,6.08e-81,59;CL:0000040,6.08e-81,59;CL:0000559,6.08e-81,59;CL:0002009,4.96e-78,61;CL:0000763,1.07e-61,108;CL:0000049,1.07e-61,108;CL:0000738,4.60e-57,136;CL:0000037,2.69e-46,168;CL:0002087,1.56e-44,115;CL:0000988,2.07e-43,177;CL:0002031,6.25e-42,120;CL:0002032,4.08e-38,161;CL:0000837,4.08e-38,161;CL:0002393,1.94e-33,9;CL:0002397,1.94e-33,9;CL:0000134,2.80e-17,354;CL:0002320,9.90e-17,361;CL:0000219,8.50e-15,386;CL:0000875,9.16e-13,3;CL:0002396,9.16e-13,3;CL:0000034,1.77e-12,441;CL:0000048,1.98e-12,427;CL:0000723,4.19e-12,433;CL:0000226,1.09e-11,3;CL:0000842,1.09e-11,3;CL:0000094,1.70e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-75;42!CL:0000049;1.25e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.91e-42!80;UBERON:0002390!2.54e-40!102;UBERON:0003061!2.54e-40!102;UBERON:0001474!2.07e-39!86;UBERON:0004765!2.59e-35!101;UBERON:0001434!2.59e-35!101;UBERON:0002193!4.80e-35!112;UBERON:0002405!1.57e-27!115;UBERON:0002204!2.78e-16!167;UBERON:0003081!2.54e-14!216;UBERON:0002384!3.29e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.82e-71,76;UBERON:0002390,7.82e-66,98;UBERON:0003061,7.82e-66,98;UBERON:0001474,1.35e-65,82;UBERON:0004765,5.70e-59,90;UBERON:0002193,7.46e-59,108;UBERON:0002405,8.89e-57,93;UBERON:0001434,3.63e-52,100;UBERON:0003081,3.81e-28,203;UBERON:0002204,1.79e-27,167;UBERON:0002384,5.55e-16,371;UBERON:0000926,1.78e-14,315;UBERON:0004120,1.78e-14,315;UBERON:0006603,1.78e-14,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,2.36018566109342,0.383829398097213,2.01260960310899,0,0,0,0,0,0,1.66198622559563,2.20598892217156,1.73608696572681,0.223915474239924,0,1.03030227053675,1.74477886535478,3.02300754951048,5.82201746850759,2.55671940596253,3.70051099219643,7.43295290148249,1.7261543539329,0.768482119587302,2.12834006899727,2.75796544589295,0,8.12558919566051,4.32957380947991,6.5497476013883,5.39336362668203,3.97909060082173,2.24650318953266,11.5080682643827,0.329851300186716,1.79517291859469,2.13112375266347,1.45104619314292,2.26954089876456,2.4912889959823,1.25624332628372,0.521482918420201,3.47502151528187,0,1.10483290796269,4.1140110367315,14.1541041829001,11.9058407980424,12.9988360215193,3.25753030324836,0.750884464207532,2.73233497385036,12.8255734683562,7.9566670879636,8.95054353446706,0,0,0,0.426730222566507,0.400395987036012,0,0,0,0,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0.486634870302636,0,0,0,0,0,0,0,0,0,0.953962497221368,1.14398982156026,2.97166001063652,0,0,0,0,0.419499436209906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47798971368783,0.176096868026452,1.03664057770386,0.144119953416961,1.13618190083742,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0,0,0,0,0,0,0,0,0,0.788123040807709,0.431255149719035,0.385029108839245,0,0,0,0,0,1.49801404789436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.89475236572042,4.74571241800957,1.38745825144478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0.929015875628594,0,0,0,0.798317485731266,0,0,0,0,0,0.626719583092093,0,0,0.1605880751037,0.403599414382095,0.425846237690326,0.343505344755765,0,0.223676107892416,0,1.36771666781428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,1.06606955203727,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0.13223260174269,0,0,0.106787412567695,0,0,0,0,0.487170393523584,0,0,0.2506898940227,0.306345576763462,0,0,0,0,0,0,0.221858103073705,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.94634094001504,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0.496211178389294,1.58284119923659,0,0,0,0,0,0.0887023701626388,0.576169937778896,0,0.0679697329768317,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.981542335574726,0,0,0,0,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124149428591716,0,0,0,0,0.342233301085281,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p@chr10:104556220..104556247,- | |||
}} |
Latest revision as of 09:53, 23 July 2015
Short description: | p@chr10:104556220..104556247, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:104556220..104556247, - |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.82e-71 | 76 |
hematopoietic system | 7.82e-66 | 98 |
blood island | 7.82e-66 | 98 |
bone element | 1.35e-65 | 82 |
skeletal element | 5.70e-59 | 90 |
hemolymphoid system | 7.46e-59 | 108 |
immune system | 8.89e-57 | 93 |
skeletal system | 3.63e-52 | 100 |
lateral plate mesoderm | 3.81e-28 | 203 |
musculoskeletal system | 1.79e-27 | 167 |
connective tissue | 5.55e-16 | 371 |
mesoderm | 1.78e-14 | 315 |
mesoderm-derived structure | 1.78e-14 | 315 |
presumptive mesoderm | 1.78e-14 | 315 |