FFCP PHASE1:Hg19::chr10:10504464..10504475,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:10504464..10504475,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr10:10504464..10504475,+ | |description=CAGE_peak_at_chr10:10504464..10504475,+ | ||
|id=chr10:10504464..10504475,+ | |id=chr10:10504464..10504475,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;1.65e-14;82!UBERON:0010122;9.74e-12;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.40e-90!41;UBERON:0001890!1.40e-90!41;UBERON:0006240!1.40e-90!41;UBERON:0003080!3.15e-88!42;UBERON:0001893!2.24e-82!34;UBERON:0001049!4.48e-81!57;UBERON:0005068!4.48e-81!57;UBERON:0006241!4.48e-81!57;UBERON:0007135!4.48e-81!57;UBERON:0002791!1.54e-79!33;UBERON:0002616!5.46e-78!59;UBERON:0001869!1.31e-77!32;UBERON:0002020!3.93e-77!34;UBERON:0003528!3.93e-77!34;UBERON:0000955!7.43e-75!69;UBERON:0006238!7.43e-75!69;UBERON:0001017!7.04e-71!82;UBERON:0005743!3.86e-70!86;UBERON:0000073!3.56e-68!94;UBERON:0001016!3.56e-68!94;UBERON:0003056!1.41e-64!61;UBERON:0002619!2.46e-61!22;UBERON:0003075!3.16e-61!86;UBERON:0007284!3.16e-61!86;UBERON:0002346!8.94e-61!90;UBERON:0000956!3.08e-58!25;UBERON:0000203!3.08e-58!25;UBERON:0001950!2.13e-55!20;UBERON:0000033!1.74e-45!123;UBERON:0007023!3.39e-43!115;UBERON:0000153!8.01e-43!129;UBERON:0007811!8.01e-43!129;UBERON:0000924!2.01e-36!173;UBERON:0006601!2.01e-36!173;UBERON:0004121!6.38e-36!169;UBERON:0002420!9.09e-26!9;UBERON:0007245!9.09e-26!9;UBERON:0010009!9.09e-26!9;UBERON:0010011!9.09e-26!9;UBERON:0000454!9.09e-26!9;UBERON:0000025!1.25e-20!194;UBERON:0009663!4.41e-20!7;UBERON:0002308!8.43e-20!9;UBERON:0000125!8.43e-20!9;UBERON:0001871!8.17e-19!7;UBERON:0000200!1.31e-18!6;UBERON:0000349!5.29e-16!5;UBERON:0001872!7.60e-16!5;UBERON:0002021!1.38e-15!5;UBERON:0004111!3.01e-15!241;UBERON:0000369!9.11e-13!4;UBERON:0002435!9.11e-13!4;UBERON:0000204!9.11e-13!4;UBERON:0010082!9.11e-13!4;UBERON:0000477!1.28e-12!286;UBERON:0000064!3.21e-12!219;UBERON:0000483!1.62e-11!309;UBERON:0000119!2.71e-11!312;UBERON:0000475!2.94e-11!365;UBERON:0002771!2.87e-10!3;UBERON:0001894!4.17e-10!7;UBERON:0006222!4.17e-10!7;UBERON:0005383!5.41e-10!3;UBERON:0005382!5.41e-10!3;UBERON:0002298!4.21e-08!8;UBERON:0000481!9.25e-08!347;UBERON:0001954!1.60e-07!2;UBERON:0003022!1.60e-07!2;UBERON:0002421!1.60e-07!2;UBERON:0002600!1.60e-07!2;UBERON:0000062!2.18e-07!511;UBERON:0001876!2.18e-07!2;UBERON:0001873!2.70e-07!2;UBERON:0010122!2.70e-07!2;UBERON:0001870!2.78e-07!2;UBERON:0004732!7.20e-07!13;UBERON:0001897!9.44e-07!2;UBERON:0001875!9.44e-07!2;UBERON:0006514!9.44e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;6.67e-109;22!UBERON:0001869;2.77e-108;32!UBERON:0002791;2.13e-101;32!UBERON:0001950;2.80e-98;20!UBERON:0001893;7.33e-98;34!UBERON:0000956;8.80e-96;25!UBERON:0000203;8.80e-96;25!UBERON:0003528;6.56e-94;34!UBERON:0002020;6.56e-94;34!UBERON:0002780;1.22e-77;41!UBERON:0001890;1.22e-77;41!UBERON:0000073;5.54e-45;53!UBERON:0002616;5.54e-45;53!UBERON:0000955;2.86e-38;68!UBERON:0001017;1.12e-34;75!UBERON:0000200;7.05e-32;6!UBERON:0002420;4.86e-28;9!UBERON:0007245;4.86e-28;9!UBERON:0010009;4.86e-28;9!UBERON:0010011;4.86e-28;9!UBERON:0000454;4.86e-28;9!UBERON:0001871;1.36e-27;6!UBERON:0000349;3.60e-27;5!UBERON:0001872;5.11e-27;5!UBERON:0002021;1.62e-26;5!UBERON:0001016;5.32e-26;83!UBERON:0000369;1.61e-21;4!UBERON:0002435;1.61e-21;4!UBERON:0000204;1.61e-21;4!UBERON:0009663;1.13e-18;7!UBERON:0001870;6.48e-17;3!UBERON:0005383;1.45e-16;3!UBERON:0005382;1.45e-16;3!UBERON:0000125;1.76e-14;9!UBERON:0002308;1.76e-14;9!UBERON:0007023;9.48e-13;114!UBERON:0001954;3.97e-12;2!UBERON:0003022;3.97e-12;2!UBERON:0002421;3.97e-12;2!UBERON:0002600;3.97e-12;2!UBERON:0002702;4.31e-12;2!UBERON:0002771;6.31e-12;2!UBERON:0001876;7.43e-12;2!UBERON:0001873;9.74e-12;2!UBERON:0011216;7.48e-11;132!UBERON:0010314;1.60e-08;132!UBERON:0002022;7.81e-07;1!UBERON:0003112;9.22e-07;1!UBERON:0011158;9.22e-07;1!UBERON:0003128;9.22e-07;1!UBERON:0001703;9.22e-07;1!UBERON:0002241;9.22e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,8.46e-122,32;UBERON:0001893,1.64e-114,34;UBERON:0002791,4.26e-113,32;UBERON:0002619,5.72e-109,22;UBERON:0002780,2.04e-108,41;UBERON:0001890,2.04e-108,41;UBERON:0003080,2.04e-108,41;UBERON:0006240,2.04e-108,41;UBERON:0003528,2.58e-106,34;UBERON:0002020,2.58e-106,34;UBERON:0001950,2.67e-98,20;UBERON:0000956,7.68e-96,25;UBERON:0000203,7.68e-96,25;UBERON:0000073,5.39e-83,53;UBERON:0002616,5.39e-83,53;UBERON:0001049,2.61e-78,56;UBERON:0005068,2.61e-78,56;UBERON:0006241,2.61e-78,56;UBERON:0007135,2.61e-78,56;UBERON:0000955,1.31e-76,68;UBERON:0006238,1.31e-76,68;UBERON:0003056,1.89e-76,61;UBERON:0001017,5.55e-72,81;UBERON:0001016,3.23e-68,89;UBERON:0003075,1.50e-55,82;UBERON:0007284,1.50e-55,82;UBERON:0002346,1.03e-52,86;UBERON:0010371,1.30e-42,104;UBERON:0007023,3.45e-38,114;UBERON:0010314,8.69e-35,132;UBERON:0004121,5.54e-33,171;UBERON:0000924,5.54e-33,171;UBERON:0006601,5.54e-33,171;UBERON:0000200,6.01e-32,6;UBERON:0002420,4.39e-28,9;UBERON:0007245,4.39e-28,9;UBERON:0010009,4.39e-28,9;UBERON:0010011,4.39e-28,9;UBERON:0000454,4.39e-28,9;UBERON:0001871,1.24e-27,6;UBERON:0000349,2.75e-27,5;UBERON:0011216,2.97e-27,223;UBERON:0001872,5.26e-27,5;UBERON:0002021,1.53e-26,5;UBERON:0000369,1.65e-21,4;UBERON:0002435,1.65e-21,4;UBERON:0000204,1.65e-21,4;UBERON:0010082,1.65e-21,4;UBERON:0000025,8.65e-19,192;UBERON:0009663,1.18e-18,7;UBERON:0001870,7.22e-17,3;UBERON:0005383,1.45e-16,3;UBERON:0005382,1.45e-16,3;UBERON:0000125,1.81e-14,9;UBERON:0002308,1.81e-14,9;UBERON:0004111,8.38e-14,240;UBERON:0001954,3.56e-12,2;UBERON:0003022,3.56e-12,2;UBERON:0002421,3.56e-12,2;UBERON:0002600,3.56e-12,2;UBERON:0002702,4.19e-12,2;UBERON:0002771,6.15e-12,2;UBERON:0001876,6.15e-12,2;UBERON:0001873,8.98e-12,2;UBERON:0010122,8.98e-12,2;UBERON:0000483,2.13e-10,306;UBERON:0000119,3.10e-10,309;UBERON:0002022,7.60e-07,1;UBERON:0003112,8.97e-07,1;UBERON:0011158,8.97e-07,1;UBERON:0003128,8.97e-07,1;UBERON:0001703,8.97e-07,1;UBERON:0002241,8.97e-07,1;UBERON:0004761,8.97e-07,1;UBERON:0009617,8.97e-07,1;UBERON:0000923,9.37e-07,560;UBERON:0010316,9.37e-07,560;UBERON:0005291,9.37e-07,560;UBERON:0006598,9.37e-07,560;UBERON:0010317,9.37e-07,560;UBERON:0002532,9.37e-07,560 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,10.9356241254293,3.93874365949436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.22643435588443,9.98068990005971,0,0,0,0,0,0,0,0,0,7.97167247232455,3.85908603601305,0,0,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,1.87411556580271,0,0,0,0,0,11.0186194186976,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,3.22885059374981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,11.9284453471395,5.99294986890933,0,0,0,0,0,6.43945300575061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,8.86068179966986,8.54183854313742,6.00916467391199,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97730370146231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,4.30335808146279,2.8339315265117,5.10828348982884,4.92279274177812,25.4592413183935,2.55881834117606,5.65164759711479,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91717990786689,8.59185908475232,5.1671699125296,3.61470118105269,22.9729419787652,0,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0.203909198930495,3.485956998831,0,0,0.078493092850514,3.29942738823604,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,4.1474809016458,17.4540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.589405839739707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,1.67516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,10.9356241254293,3.93874365949436,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93866549219044,2.22643435588443,9.98068990005971,0,0,0,0,0,0,0,0,0,7.97167247232455,3.85908603601305,0,0,0,3.07139556015562,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,1.87411556580271,0,0,0,0,0,11.0186194186976,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,3.22885059374981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,0.547621515567972,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,11.9284453471395,5.99294986890933,0,0,0,0,0,6.43945300575061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471162288750703,8.86068179966986,8.54183854313742,6.00916467391199,0,0.110929051536852,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97730370146231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0.247871528518004,0,0,0,0,0,0,4.30335808146279,2.8339315265117,5.10828348982884,4.92279274177812,25.4592413183935,2.55881834117606,5.65164759711479,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,3.91717990786689,8.59185908475232,5.1671699125296,3.61470118105269,22.9729419787652,0,0.496211178389294,0,0,0,0,0.606965604236632,0.455324382702595,0,0,0,0.203909198930495,3.485956998831,0,0,0.078493092850514,3.29942738823604,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,4.1474809016458,17.4540276136151,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,1.03432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:10504464..10504475,+ | |short_description=p@chr10:10504464..10504475,+ | ||
}} | }} |
Latest revision as of 09:57, 23 July 2015
Short description: | p@chr10:10504464..10504475, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:10504464..10504475, + |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data