FFCP PHASE1:Hg19::chr10:118927879..118927891,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:118927879..118927891,+ | |||
|coexpression_cluster_id=C152 | |coexpression_cluster_id=C152 | ||
|description=CAGE_peak_at_chr10:118927879..118927891,+ | |description=CAGE_peak_at_chr10:118927879..118927891,+ | ||
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|ontology_enrichment_celltype=CL:0002596!1.05e-07!2;CL:1000415!2.12e-07!2 | |ontology_enrichment_celltype=CL:0002596!1.05e-07!2;CL:1000415!2.12e-07!2 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | |ontology_enrichment_development_v019=UBERON:0005425;2.55e-98;1!UBERON:0003056;5.96e-34;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | |ontology_enrichment_disease_v019=DOID:171;2.73e-11;10 | ||
|ontology_enrichment_disease_v019_2=DOID:171,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002110!2.95e-17!3;UBERON:0006242!2.95e-17!3;UBERON:0000941!3.50e-14!1;UBERON:0004904!3.50e-14!1;UBERON:0002464!3.50e-14!1;UBERON:0001021!3.50e-14!1;UBERON:0001785!3.50e-14!1;UBERON:0002294!6.29e-08!7;UBERON:0001173!6.29e-08!7;UBERON:0004912!6.29e-08!7;UBERON:0003714!9.87e-08!2;UBERON:0005162!9.87e-08!2;UBERON:0000122!9.87e-08!2;UBERON:0005396!1.05e-07!2 | |ontology_enrichment_uberon=UBERON:0002110!2.95e-17!3;UBERON:0006242!2.95e-17!3;UBERON:0000941!3.50e-14!1;UBERON:0004904!3.50e-14!1;UBERON:0002464!3.50e-14!1;UBERON:0001021!3.50e-14!1;UBERON:0001785!3.50e-14!1;UBERON:0002294!6.29e-08!7;UBERON:0001173!6.29e-08!7;UBERON:0004912!6.29e-08!7;UBERON:0003714!9.87e-08!2;UBERON:0005162!9.87e-08!2;UBERON:0000122!9.87e-08!2;UBERON:0005396!1.05e-07!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13 | |ontology_enrichment_uberon_v019=UBERON:0000941;2.55e-98;1!UBERON:0001785;2.55e-98;1!UBERON:0002464;2.55e-98;1!UBERON:0004904;2.55e-98;1!UBERON:0001021;2.55e-98;1!UBERON:0003714;4.52e-50;2!UBERON:0005162;4.52e-50;2!UBERON:0000122;4.52e-50;2!UBERON:0002346;5.56e-26;4!UBERON:0000923;5.56e-26;4!UBERON:0010316;5.56e-26;4!UBERON:0005291;5.56e-26;4!UBERON:0002050;4.21e-21;5!UBERON:0005423;4.21e-21;5!UBERON:0000010;2.45e-12;8!UBERON:0004732;5.70e-09;13 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.55e-98,1;UBERON:0001785,2.55e-98,1;UBERON:0002464,2.55e-98,1;UBERON:0004904,2.55e-98,1;UBERON:0001021,2.55e-98,1;UBERON:0003902,2.55e-98,1;UBERON:0005425,2.55e-98,1;UBERON:0003714,4.52e-50,2;UBERON:0005162,4.52e-50,2;UBERON:0000122,4.52e-50,2;UBERON:0001781,7.14e-26,4;UBERON:0000966,9.07e-18,6;UBERON:0005388,9.07e-18,6;UBERON:0001802,9.07e-18,6;UBERON:0000010,2.45e-12,8;UBERON:0004732,5.70e-09,13 | |||
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|short_description=p@chr10:118927879..118927891,+ | |short_description=p@chr10:118927879..118927891,+ | ||
}} | }} |
Latest revision as of 10:50, 23 July 2015
Short description: | p@chr10:118927879..118927891, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:118927879..118927891, + |
Coexpression cluster: | C152_peripheral_neuroectodermal_neuroepithelioma_neuroblastoma_testicular_carcinoid_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.55e-98 | 1 |
cranial nerve | 2.55e-98 | 1 |
nerve trunk | 2.55e-98 | 1 |
nerve connecting eye with brain | 2.55e-98 | 1 |
nerve | 2.55e-98 | 1 |
retinal neural layer | 2.55e-98 | 1 |
presumptive neural retina | 2.55e-98 | 1 |
neural tissue | 4.52e-50 | 2 |
multi cell component structure | 4.52e-50 | 2 |
neuron projection bundle | 4.52e-50 | 2 |
layer of retina | 7.14e-26 | 4 |
retina | 9.07e-18 | 6 |
photoreceptor array | 9.07e-18 | 6 |
posterior segment of eyeball | 9.07e-18 | 6 |
peripheral nervous system | 2.45e-12 | 8 |
segmental subdivision of nervous system | 5.70e-09 | 13 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.73e-11 | 10 |