FFCP PHASE1:Hg19::chr10:13908291..13908320,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:13908291..13908320,- to FFCP PHASE1:Hg19::chr10:13908291..13908320,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:13908291..13908320,- | |||
|coexpression_cluster_id=C428 | |||
|description=CAGE_peak_at_chr10:13908291..13908320,- | |||
|id=chr10:13908291..13908320,- | |||
|ontology_enrichment_celltype=CL:0000115!1.27e-22!35;CL:0002139!5.18e-21!24;CL:0002078!2.00e-18!44;CL:0000071!1.87e-17!18;CL:0002546!1.87e-17!18;CL:0000213!1.62e-15!57;CL:0000215!1.62e-15!57;CL:0000222!9.90e-13!119;CL:1000413!7.98e-11!9;CL:0000066!2.72e-09!254;CL:0002543!7.43e-08!6;CL:0002544!8.69e-08!6;CL:0000220!5.43e-07!246;CL:0002321!8.94e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002139;6.89e-49;24!CL:0000115;2.59e-46;36!CL:0000071;3.71e-46;18!CL:0002078;5.19e-27;45!CL:1000413;4.22e-24;9!CL:0000213;1.16e-23;58!CL:0000215;1.16e-23;58!CL:0002543;5.39e-21;6!CL:0002544;5.68e-15;6!CL:0002618;1.65e-11;3!CL:0000076;3.06e-10;63!CL:0002545;4.00e-08;2!CL:0002262;2.00e-07;2!CL:1000398;2.00e-07;2!CL:0002188;3.81e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.58e-55,36;CL:0002139,3.88e-49,24;CL:0000071,1.92e-46,18;CL:0002546,1.92e-46,18;CL:0002078,2.12e-46,45;CL:0000213,3.78e-40,58;CL:0000215,3.78e-40,58;CL:1000413,2.15e-24,9;CL:0002543,5.27e-21,6;CL:0000222,4.08e-18,121;CL:0002544,3.88e-15,6;CL:0000076,5.21e-15,63;CL:0002618,2.44e-11,3;CL:0000066,2.81e-11,253;CL:0002545,3.88e-08,2;CL:0002262,1.48e-07,2;CL:1000398,1.48e-07,2;CL:0002188,3.49e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002546;3.71e-46;18!CL:0000222;5.85e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.05e-20!79;UBERON:0007798!1.05e-20!79;UBERON:0001986!1.87e-17!18;UBERON:0004638!1.87e-17!18;UBERON:0004852!1.87e-17!18;UBERON:0000055!3.90e-17!69;UBERON:0001009!9.38e-17!113;UBERON:0003914!1.54e-15!118;UBERON:0001981!2.59e-15!60;UBERON:0007500!2.59e-15!60;UBERON:0004537!2.59e-15!60;UBERON:0006965!2.59e-15!60;UBERON:0004535!3.93e-15!110;UBERON:0000477!4.32e-15!286;UBERON:0000487!8.63e-15!22;UBERON:0004872!7.18e-14!84;UBERON:0000119!1.17e-13!312;UBERON:0000483!3.63e-13!309;UBERON:0000490!5.57e-13!138;UBERON:0006914!3.66e-12!25;UBERON:0003915!7.98e-11!9;UBERON:0004700!7.98e-11!9;UBERON:0001917!7.98e-11!9;UBERON:0004111!4.11e-10!241;UBERON:0000481!1.28e-09!347;UBERON:0000467!3.38e-09!625;UBERON:0000480!4.20e-09!626;UBERON:0000468!1.53e-08!659;UBERON:0003104!2.38e-08!238;UBERON:0009142!2.38e-08!238;UBERON:0000025!4.79e-08!194;UBERON:0001638!8.39e-08!9;UBERON:0003920!8.39e-08!9;UBERON:0004582!8.39e-08!9;UBERON:0001048!1.19e-07!168;UBERON:0005256!4.27e-07!143;UBERON:0002100!6.02e-07!216;UBERON:0001637!7.46e-07!42;UBERON:0003509!7.46e-07!42;UBERON:0004572!7.46e-07!42 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.71e-46;18!UBERON:0001986;3.71e-46;18!UBERON:0004852;3.71e-46;18!UBERON:0000487;5.22e-37;22!UBERON:0006914;4.53e-32;25!UBERON:0003915;4.22e-24;9!UBERON:0004700;4.22e-24;9!UBERON:0001917;4.22e-24;9!UBERON:0000490;3.13e-21;33!UBERON:0001638;2.59e-18;9!UBERON:0003920;2.59e-18;9!UBERON:0004582;2.59e-18;9!UBERON:0000055;1.22e-12;65!UBERON:0007500;1.26e-12;56!UBERON:0001981;1.26e-12;56!UBERON:0004537;1.26e-12;56!UBERON:0003914;1.42e-08;74!UBERON:0002049;1.82e-08;75!UBERON:0007798;1.82e-08;75!UBERON:0005800;4.00e-08;2!UBERON:0001515;4.00e-08;2!UBERON:0001009;1.81e-07;112!UBERON:0001281;2.00e-07;2!UBERON:0003497;2.00e-07;2!UBERON:0003909;2.00e-07;2!UBERON:0005090;2.00e-07;2!UBERON:0001630;2.00e-07;2!UBERON:0003835;2.00e-07;2!UBERON:0004535;2.69e-07;109!UBERON:0002066;4.73e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.92e-46,18;UBERON:0001986,1.92e-46,18;UBERON:0004852,1.92e-46,18;UBERON:0000487,3.06e-37,22;UBERON:0006914,2.85e-32,25;UBERON:0003915,2.15e-24,9;UBERON:0004700,2.15e-24,9;UBERON:0001917,2.15e-24,9;UBERON:0000055,1.62e-23,68;UBERON:0002049,1.48e-21,78;UBERON:0007798,1.48e-21,78;UBERON:0007500,1.60e-20,59;UBERON:0001981,1.60e-20,59;UBERON:0004537,1.60e-20,59;UBERON:0006965,1.60e-20,59;UBERON:0001638,2.98e-18,9;UBERON:0003920,2.98e-18,9;UBERON:0004582,2.98e-18,9;UBERON:0001009,4.15e-17,112;UBERON:0004535,2.66e-16,109;UBERON:0004872,4.83e-16,83;UBERON:0003914,1.27e-14,117;UBERON:0000490,7.24e-10,148;UBERON:0005800,3.88e-08,2;UBERON:0001515,3.88e-08,2;UBERON:0001281,1.48e-07,2;UBERON:0003497,1.48e-07,2;UBERON:0003909,1.48e-07,2;UBERON:0003835,1.48e-07,2;UBERON:0004111,1.58e-07,240;UBERON:0005090,1.70e-07,2;UBERON:0001630,1.70e-07,2;UBERON:0000926,3.84e-07,315;UBERON:0004120,3.84e-07,315;UBERON:0006603,3.84e-07,315;UBERON:0003081,4.50e-07,203;UBERON:0000025,4.57e-07,192;UBERON:0002066,5.94e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0.123766352960047,0,0,0,0,0.487932798790507,0.123121058076788,0.204000691244253,0,0,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0.283604451492204,0.443458794925128,0.175669571386252,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,6.55915944310127,0.860234595106124,2.77712401286075,2.82653970962005,2.09749718104953,1.6507082516404,2.92592953151535,10.0782536076038,6.04802646567407,13.0541038978221,1.20848795132744,0,1.46437234528902,2.57364156242108,2.43042584364528,3.21479021822687,2.02076435363553,2.36484109014977,4.5994991239765,1.89853131913626,2.38162267109529,0,0,0,0,0.12663051166458,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0.74000264525148,0,1.34710672069688,1.47115712802113,0.151357427644931,0,0.234321431833797,0,1.1409436430889,0.149448680551801,0.117434498643765,0.809364721840658,0.421352420106746,0.816616685019573,0.122834317311768,0.516628905878827,0,0,0,0,0.168336113954066,0.125118519871964,0.554128230968366,0,0,0,0.113432183160021,0.358779271377724,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0.207322110030741,0.252320850875628,0,0,0,0,0,0,0,0.168584690078102,0.241011029883482,0,0.217879444092406,0.237270619111097,0.134831308160164,0.196221465125346,0,1.4763109092493,1.40241773803446,0,0,0,0,0.590789906681404,0,0.122988438543114,0.514703430895577,0,0,0,0.0925884451585296,0,0,0,0.231860809950154,0.117408694235822,0.433099343283221,0,0.761016608938393,0,0,0,0,0,0,0.16798212819886,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448524337381443,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.434343920002738,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.462629081407967,0.177561725313127,0,0,0.116210378459959,0.241718899183244,0.200506470303285,0,0.114814448164607,0,0,0,0.231046011313244,0,0,0.211103257785751,3.4120015221269,2.72149928442425,0.215915916102139,3.08454505380579,0,0,0.764628819135115,0,0,0,0,0.512900250232778,0,0,0.618246069886334,0,0,0,0,0,0.096670718292122,0,0,0.275673144969061,0,0,0.0852266274161009,0,0,0,0.510450849978337,0,0,0.31481234683064,0,0.308033580176089,0,0,0.37064843820784,0.286249773483982,0,0.632758849437452,0,0.255897791311334,0.42793898803392,0,0,0.719489830333259,0,0.235624804691373,1.01091240786658,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0.405820753925408,0.6196469961995,0,0,0.196498082026242,0.35667105148125,0,0,0,0.379473173765715,1.39973888097993,0.288666338176536,0,0,0.659006605437454,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0.427296284509893,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.54175355742871,0,0,0.852408440419239,0,0,0,0,0,0.556543525114529,0,0,0,0,0,0,0,0.311039587661807,0.988551862620595,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0,0,2.17499872630438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,0,0,0,0,0,1.89898258075224,0,0,0,0,0.176915129006678,0,0,0,0,0,1.60515529459758,0,0,0.19566461893209,0,0,0,0,0.189559738885464,0,0,0.664653872707185,0.330991955875499,0.313932918407225,0,0,2.4961441142365,0,0,0.0870592065804026,0.698906672968121,1.0319161948297,0,0,0,0,0,0,2.74083849293502,3.37814839895082,0.189932387867636,0,0.320635281006135,0,0,0,0,0,1.00838358591705,1.98804056904692,0,0.271808412147228,0.523014231561666,0.101998217636322,0,0,0,0,0,0,0.279282401272254,0.458320848023367,4.30723814746088,0.998395002494955,1.71690419254628,0.223171457441873,0.739018197353989,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0,0,0,0,0,0.236417121897595,0.0524545881349981,1.79520572082991,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0.427149650270779,0.157204305099666,0,0,0,0,0,0,3.0082787282724,0.612691153526923,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.214821114084977,0,0,0.400027764663154,0,0,1.26184898228651,1.15571898244382,0,0,0,0,0,0,0,0,0.530067437837643,0.38582807654183,1.18259708457151,0,0,1.21543982470953,0,0,0,0,0,0.737318726261158,4.22624246717254,0,0,0,1.70254786070051,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0,0,0,0,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14640342257068,0.147856086217045,0,0,0,0,0,0,0.992422356778588,0,0,0,0,0,0,0.709618961301111,0,1.37190407549935,0.0679697329768317,0,1.18193840883968,0.222462803784138,0.313972371402056,0,0.280272163313789,0,0,0.47775168788705,0.285906176706625,0,0,0,0,0,0,0,0,0.591660003652827,0.426067023795788,0,0,0,0,0,0,0,1.29485767437579,1.12929087541872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169927114687817,0,0.0644578879735772,0,0,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| ||
|short_description=p@chr10:13908291..13908320,- | |||
}} | }} |
Latest revision as of 11:57, 23 July 2015
Short description: | p@chr10:13908291..13908320, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13908291..13908320, - |
Coexpression cluster: | C428_Endothelial_Renal_Lymphatic_Hepatic_adipose_heart_breast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.58e-55 | 36 |
endothelial cell of vascular tree | 3.88e-49 | 24 |
blood vessel endothelial cell | 1.92e-46 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.92e-46 | 18 |
meso-epithelial cell | 2.12e-46 | 45 |
lining cell | 3.78e-40 | 58 |
barrier cell | 3.78e-40 | 58 |
endothelial cell of artery | 2.15e-24 | 9 |
vein endothelial cell | 5.27e-21 | 6 |
mesodermal cell | 4.08e-18 | 121 |
aortic endothelial cell | 3.88e-15 | 6 |
squamous epithelial cell | 5.21e-15 | 63 |
endothelial cell of umbilical vein | 2.44e-11 | 3 |
epithelial cell | 2.81e-11 | 253 |
thoracic aorta endothelial cell | 3.88e-08 | 2 |
endothelial cell of sinusoid | 1.48e-07 | 2 |
endothelial cell of hepatic sinusoid | 1.48e-07 | 2 |
glomerular endothelial cell | 3.49e-07 | 5 |