FFCP PHASE1:Hg19::chr10:13920220..13920223,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:13920220..13920223,-
|short_description=p@chr10:13920220..13920223,-
|description=CAGE_peak_at_chr10:13920220..13920223,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:13920220..13920223,- | |||
|description=CAGE_peak_at_chr10:13920220..13920223,- | |||
|id=chr10:13920220..13920223,- | |||
|ontology_enrichment_celltype=CL:0002319!1.03e-07!25 | |||
|ontology_enrichment_celltype_v019=CL:0000047;1.38e-09;2!CL:0002593;1.38e-09;2!CL:0002573;8.38e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002593,1.33e-09,2;CL:0002573,8.62e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.90e-18;1!UBERON:0003056;5.97e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!3.28e-22!94;UBERON:0001016!3.28e-22!94;UBERON:0001017!9.04e-19!82;UBERON:0005743!3.90e-18!86;UBERON:0001049!1.23e-16!57;UBERON:0005068!1.23e-16!57;UBERON:0006241!1.23e-16!57;UBERON:0007135!1.23e-16!57;UBERON:0000955!2.02e-15!69;UBERON:0006238!2.02e-15!69;UBERON:0002020!5.48e-14!34;UBERON:0003528!5.48e-14!34;UBERON:0001893!6.63e-14!34;UBERON:0002616!1.17e-13!59;UBERON:0002780!1.39e-13!41;UBERON:0001890!1.39e-13!41;UBERON:0006240!1.39e-13!41;UBERON:0002791!2.12e-13!33;UBERON:0003080!4.90e-13!42;UBERON:0002346!5.79e-13!90;UBERON:0003075!9.66e-13!86;UBERON:0007284!9.66e-13!86;UBERON:0001869!3.11e-12!32;UBERON:0000924!3.34e-12!173;UBERON:0006601!3.34e-12!173;UBERON:0004121!6.77e-12!169;UBERON:0003056!5.74e-10!61;UBERON:0000153!6.46e-10!129;UBERON:0007811!6.46e-10!129;UBERON:0000025!9.22e-10!194;UBERON:0000033!2.19e-09!123;UBERON:0000119!4.05e-09!312;UBERON:0000483!8.56e-09!309;UBERON:0000956!9.52e-09!25;UBERON:0000203!9.52e-09!25;UBERON:0007023!2.28e-08!115;UBERON:0000468!4.20e-08!659;UBERON:0000467!1.01e-07!625;UBERON:0000480!1.23e-07!626;UBERON:0002420!1.46e-07!9;UBERON:0007245!1.46e-07!9;UBERON:0010009!1.46e-07!9;UBERON:0010011!1.46e-07!9;UBERON:0000454!1.46e-07!9;UBERON:0004111!2.44e-07!241;UBERON:0000477!2.71e-07!286;UBERON:0002308!3.34e-07!9;UBERON:0000125!3.34e-07!9;UBERON:0000922!3.96e-07!612;UBERON:0002619!4.06e-07!22;UBERON:0001950!4.16e-07!20;UBERON:0000923!8.42e-07!604;UBERON:0005291!8.42e-07!604;UBERON:0006598!8.42e-07!604;UBERON:0002532!8.42e-07!604 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.90e-18;1!UBERON:0001785;2.90e-18;1!UBERON:0002464;2.90e-18;1!UBERON:0004904;2.90e-18;1!UBERON:0001021;2.90e-18;1!UBERON:0001871;2.13e-10;6!UBERON:0003714;8.32e-10;2!UBERON:0005162;8.32e-10;2!UBERON:0000122;8.32e-10;2!UBERON:0001876;1.38e-09;2!UBERON:0002456;1.38e-09;2!UBERON:0000010;2.20e-08;8!UBERON:0001950;1.10e-07;20!UBERON:0002619;4.63e-07;22!UBERON:0001896;8.38e-07;3!UBERON:0005290;8.38e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,3.16e-18,1;UBERON:0001785,3.16e-18,1;UBERON:0002464,3.16e-18,1;UBERON:0004904,3.16e-18,1;UBERON:0001021,3.16e-18,1;UBERON:0003902,3.16e-18,1;UBERON:0005425,3.16e-18,1;UBERON:0001016,5.28e-11,89;UBERON:0001871,1.61e-10,6;UBERON:0003714,8.69e-10,2;UBERON:0005162,8.69e-10,2;UBERON:0000122,8.69e-10,2;UBERON:0001876,9.46e-10,2;UBERON:0002456,1.33e-09,2;UBERON:0000010,2.29e-08,8;UBERON:0001950,1.04e-07,20;UBERON:0002619,4.40e-07,22;UBERON:0001017,5.31e-07,81;UBERON:0001896,9.12e-07,3;UBERON:0005290,9.12e-07,3;UBERON:0010096,9.12e-07,3 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0.286235987131057,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.671746422719773,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.665188192387692,0.175669571386252,0.196468613246569,0,0,0,0,0,0,0,0,0.198762407366705,0,0.347140501607594,0.56530794192401,0,0.275118041940067,1.04497483268405,0.775250277507987,0.71153252537342,0,0.805658634218294,0,0.488124115096339,0.367663080345869,0,0.357198913136319,0.44905874525234,0.337834441449967,0,0,0.183201743930407,0,0,0.436094052142534,0,0.12663051166458,0.264818361626438,0.573673241497627,0,0,0,0,0,0.269421344139376,0.490385709340376,0,0,0,0.312160076830321,0,0.298897361103602,0.469737994575059,0.485618833104395,0,0,0.122834317311768,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0,0,0.179389635688862,0,0.211931901159562,0.300091096084402,0,0,0,0.337552664482532,0.292311015483596,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0.1466765716419,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0.773288812777695,0.167516265334349,0,0,0,0,0,0,0,0,0.178428988797162,0,0.117141414992713,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0,0,0,0.270946437543853,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0.183138929636687,0.495056999523528,0,0,0,0,0,0.15350367472613,0.413509717453592,0,0.145016693914229,0.0852266274161009,0,0,0,0.127612712494584,0,0.464845549297286,0,0,0.308033580176089,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0.54907405947211,0.117812402345686,0,0,0,0,1.21856744815642,0,0,0.141405431953713,0,0,0.66343897524122,0.438450885253763,0.578775534266688,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0.111443384277478,0,0,0,0,1.9882952955326,0.562677665642051,0.556543525114529,0,0,0.996239941255349,0,0,0.102268682502155,0,0,0.0898683511473268,0,0,0,0,0,2.90799823828566,0,0,0,0,0,0,0,0,0.689486746482929,0,0.347249989866585,0.885741385813839,0.482385754501632,0,0.221158519862449,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0.123563938946503,0,0.876214728748802,0.802577647298789,0,0,0,0,0,0,1.22429104652196,0.31593289814244,0,0,0,0.661983911750998,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0,0.411125773940253,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0.288950589901519,0,0.547621515567972,0,0.429765441419957,0,0.279282401272254,0.687481272035051,0,0,0,0,0.134366944973453,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0.137539436597234,0,0,0,0.607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0.681552087141687,0,0,0,0.387848869084652,0.52893040697076,0,0,0,0.314408610199332,0,0,0,0,0,0.544017803369474,1.5041393641362,0.306345576763462,0.983617892129413,0,0,0.122026264901963,0.250381861413,1.14681839138014,0,0.683060432355218,0.276697269872462,0,0.454947352624943,0,0,0,0.144921028610825,0,0,0,0,0.251567901752575,0,0.228840068396924,0,0.310874401165561,0.295710299979268,0.477890301491107,0.449803112163605,0.155262956876259,0.829412415681711,0,0,0,0,0,0.363697318405119,0.214821114084977,0.928067519756987,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353378291891762,0,0,0,0,0.303859956177382,0.553033744606923,0,0,0,0,0,0,0,0,0,0,0.184105950251841,0,0,0.127894371303652,0.107824811396682,0.157265941855896,0.109209638192014,0,0.212574920101683,0.247871528518004,0,0.318004350653419,0,0,0,0,0.385375350578757,0,0.957803154342908,0,0.504143392443436,0,0.807378228159255,2.85538840518309,0,0,0,0,0,0.690359926060101,0,0,0.20170506870352,0,0,0,0,0.202612753855184,0,0.413373593002368,0.126831620387814,1.09394961803644,0,0,0,0,0,0.336283722218824,0,0,0.177404740325278,0.230467975111559,0.342976018874837,0.203909198930495,0.526182188502793,0,0,0,0.314231179832004,0,0.913158720509496,0.647782773655864,0,0.428859265059938,0.47404083519818,0,0,0,0,0,0,0,0.828324005113957,1.19298766662821,0,0,0,0,0,0,0,0.647428837187895,0,0,0.971421986118279,0,0,0,0,0,0.301925687133347,0.0771741581079447,0,0,0,0,0.196308467114945,0.297046400327086,0.4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| ||
|short_description=p@chr10:13920220..13920223,- | |||
}} | }} |
Latest revision as of 11:57, 23 July 2015
Short description: | p@chr10:13920220..13920223, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:13920220..13920223, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the internal thoracic artery | 1.33e-09 | 2 |
Schwann cell | 8.62e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 3.16e-18 | 1 |
cranial nerve | 3.16e-18 | 1 |
nerve trunk | 3.16e-18 | 1 |
nerve connecting eye with brain | 3.16e-18 | 1 |
nerve | 3.16e-18 | 1 |
retinal neural layer | 3.16e-18 | 1 |
presumptive neural retina | 3.16e-18 | 1 |
nervous system | 5.28e-11 | 89 |
temporal lobe | 1.61e-10 | 6 |
neural tissue | 8.69e-10 | 2 |
multi cell component structure | 8.69e-10 | 2 |
neuron projection bundle | 8.69e-10 | 2 |
amygdala | 9.46e-10 | 2 |
internal thoracic artery | 1.33e-09 | 2 |
peripheral nervous system | 2.29e-08 | 8 |
neocortex | 1.04e-07 | 20 |
regional part of cerebral cortex | 4.40e-07 | 22 |
central nervous system | 5.31e-07 | 81 |
medulla oblongata | 9.12e-07 | 3 |
myelencephalon | 9.12e-07 | 3 |
future myelencephalon | 9.12e-07 | 3 |