FFCP PHASE1:Hg19::chr10:17276681..17276732,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:17276681..17276732,+
|short_description=p@chr10:17276681..17276732,+
|description=CAGE_peak_at_chr10:17276681..17276732,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:17276681..17276732,+ | |||
|coexpression_cluster_id=C581 | |||
|description=CAGE_peak_at_chr10:17276681..17276732,+ | |||
|id=chr10:17276681..17276732,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.15e-30!180;CL:0002371!1.01e-26!591;CL:0000144!4.59e-23!625;CL:0000048!3.24e-21!430;CL:0000723!7.87e-20!436;CL:0000034!2.24e-18!444;CL:0000057!1.32e-17!75;CL:0000222!1.49e-15!119;CL:0002057!2.37e-13!42;CL:0000548!6.38e-13!679;CL:0000004!6.38e-13!679;CL:0000255!6.38e-13!679;CL:0000012!1.15e-12!682;CL:0000860!1.59e-11!45;CL:0002320!1.66e-11!365;CL:0000680!2.67e-11!57;CL:0000056!2.67e-11!57;CL:0000355!2.67e-11!57;CL:0000183!2.78e-11!59;CL:0002009!3.90e-11!65;CL:0000557!6.96e-11!71;CL:0002194!1.06e-10!63;CL:0000576!1.06e-10!63;CL:0000040!1.06e-10!63;CL:0000559!1.06e-10!63;CL:0000187!1.27e-10!54;CL:0000219!2.81e-10!390;CL:0000134!3.78e-10!358;CL:0000839!7.78e-10!70;CL:0000192!2.28e-09!42;CL:0000514!2.28e-09!42;CL:0000393!2.66e-09!60;CL:0000211!2.66e-09!60;CL:0000766!3.97e-09!76;CL:0002620!2.39e-08!23;CL:0000359!5.18e-08!32;CL:0000003!6.12e-08!722 | |||
|ontology_enrichment_celltype_v019=CL:0000860;7.42e-15;33!CL:0002057;7.42e-15;33!CL:0000473;1.63e-13;39!CL:0000234;1.63e-13;39!CL:0002620;1.33e-08;23!CL:0000057;6.20e-08;73!CL:0000359;7.80e-08;32!CL:0000192;1.27e-07;43!CL:0000576;5.34e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.56e-23,427;CL:0000723,4.01e-22,433;CL:0000034,2.56e-20,441;CL:0000057,1.84e-18,76;CL:0000222,1.81e-16,121;CL:0000473,4.97e-15,48;CL:0000234,4.97e-15,48;CL:0000860,1.76e-13,42;CL:0002057,1.76e-13,42;CL:0002009,5.18e-13,61;CL:0002320,8.08e-13,361;CL:0000557,9.25e-13,67;CL:0002194,1.50e-12,59;CL:0000576,1.50e-12,59;CL:0000040,1.50e-12,59;CL:0000559,1.50e-12,59;CL:0000680,5.04e-12,58;CL:0000056,5.04e-12,58;CL:0000355,5.04e-12,58;CL:0000839,1.05e-11,66;CL:0000219,1.14e-11,386;CL:0000134,2.37e-11,354;CL:0000187,2.54e-11,55;CL:0000766,1.68e-10,72;CL:0000192,4.94e-10,43;CL:0000514,4.94e-10,43;CL:0000393,1.23e-09,61;CL:0000211,1.23e-09,61;CL:0002620,1.43e-08,23;CL:0000359,3.18e-08,32 | |||
|ontology_enrichment_development_v019=CL:0002057;2.10e-10;42!CL:0000514;1.27e-07;43!CL:0000355;9.48e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.24e-25!167;UBERON:0003081!1.12e-20!216;UBERON:0000914!5.08e-16!83;UBERON:0002329!5.08e-16!83;UBERON:0003077!5.08e-16!83;UBERON:0003059!5.08e-16!83;UBERON:0007282!5.08e-16!83;UBERON:0009618!5.08e-16!83;UBERON:0007285!5.08e-16!83;UBERON:0002049!3.01e-15!79;UBERON:0007798!3.01e-15!79;UBERON:0004290!2.16e-14!70;UBERON:0000055!7.95e-14!69;UBERON:0004535!2.32e-13!110;UBERON:0000926!6.19e-13!448;UBERON:0004120!6.19e-13!448;UBERON:0006603!6.19e-13!448;UBERON:0004765!6.58e-13!101;UBERON:0001434!6.58e-13!101;UBERON:0001009!1.86e-12!113;UBERON:0000486!3.55e-12!82;UBERON:0001981!4.33e-12!60;UBERON:0007500!4.33e-12!60;UBERON:0004537!4.33e-12!60;UBERON:0006965!4.33e-12!60;UBERON:0001637!9.70e-12!42;UBERON:0003509!9.70e-12!42;UBERON:0004572!9.70e-12!42;UBERON:0002384!1.03e-11!375;UBERON:0002371!1.19e-11!80;UBERON:0004872!3.13e-11!84;UBERON:0001474!4.56e-11!86;UBERON:0001134!7.52e-11!61;UBERON:0002036!7.52e-11!61;UBERON:0003082!7.52e-11!61;UBERON:0002385!4.57e-10!63;UBERON:0001015!4.57e-10!63;UBERON:0000383!4.57e-10!63;UBERON:0004573!1.74e-09!33;UBERON:0004571!1.74e-09!33;UBERON:0002193!1.51e-08!112;UBERON:0002199!1.75e-07!45;UBERON:0002416!1.75e-07!45;UBERON:0002390!2.39e-07!102;UBERON:0003061!2.39e-07!102;UBERON:0005256!3.81e-07!143 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;5.82e-09;42!UBERON:0003509;5.82e-09;42!UBERON:0004572;5.82e-09;42!UBERON:0004573;7.54e-09;33!UBERON:0004571;7.54e-09;33!UBERON:0007500;1.38e-07;56!UBERON:0001981;1.38e-07;56!UBERON:0004537;1.38e-07;56!UBERON:0000055;2.33e-07;65!UBERON:0002049;2.48e-07;75!UBERON:0007798;2.48e-07;75 | |||
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| ||
|short_description=p@chr10:17276681..17276732,+ | |||
}} | }} |
Latest revision as of 12:16, 23 July 2015
Short description: | p@chr10:17276681..17276732, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:17276681..17276732, + |
Coexpression cluster: | C581_Fibroblast_Keratocytes_Lens_CD14_Mesenchymal_Hepatic_Hair |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.56e-23 | 427 |
somatic stem cell | 4.01e-22 | 433 |
stem cell | 2.56e-20 | 441 |
fibroblast | 1.84e-18 | 76 |
mesodermal cell | 1.81e-16 | 121 |
defensive cell | 4.97e-15 | 48 |
phagocyte | 4.97e-15 | 48 |
classical monocyte | 1.76e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.76e-13 | 42 |
macrophage dendritic cell progenitor | 5.18e-13 | 61 |
connective tissue cell | 8.08e-13 | 361 |
granulocyte monocyte progenitor cell | 9.25e-13 | 67 |
monopoietic cell | 1.50e-12 | 59 |
monocyte | 1.50e-12 | 59 |
monoblast | 1.50e-12 | 59 |
promonocyte | 1.50e-12 | 59 |
muscle precursor cell | 5.04e-12 | 58 |
myoblast | 5.04e-12 | 58 |
multi-potent skeletal muscle stem cell | 5.04e-12 | 58 |
myeloid lineage restricted progenitor cell | 1.05e-11 | 66 |
motile cell | 1.14e-11 | 386 |
mesenchymal cell | 2.37e-11 | 354 |
muscle cell | 2.54e-11 | 55 |
myeloid leukocyte | 1.68e-10 | 72 |
smooth muscle cell | 4.94e-10 | 43 |
smooth muscle myoblast | 4.94e-10 | 43 |
electrically responsive cell | 1.23e-09 | 61 |
electrically active cell | 1.23e-09 | 61 |
skin fibroblast | 1.43e-08 | 23 |
vascular associated smooth muscle cell | 3.18e-08 | 32 |