FFCP PHASE1:Hg19::chr10:31629540..31629582,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:31629540..31629582,+ | |||
|coexpression_cluster_id=C2056 | |||
|description=CAGE_peak_at_chr10:31629540..31629582,+ | |description=CAGE_peak_at_chr10:31629540..31629582,+ | ||
|id=chr10:31629540..31629582,+ | |id=chr10:31629540..31629582,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000623;7.70e-12;3!CL:0000791;5.40e-07;18!CL:0000789;5.40e-07;18!CL:0002419;5.40e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000623,3.61e-12,3;CL:0000825,3.61e-12,3;CL:0000838,7.35e-08,52;CL:0000542,1.16e-07,53;CL:0000051,1.16e-07,53;CL:0000791,6.46e-07,18;CL:0000789,6.46e-07,18;CL:0002420,6.46e-07,18;CL:0002419,6.46e-07,18;CL:0000790,6.46e-07,18 | |||
|ontology_enrichment_development_v019=CL:0000790;5.40e-07;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!6.07e-17!57;UBERON:0005068!6.07e-17!57;UBERON:0006241!6.07e-17!57;UBERON:0007135!6.07e-17!57;UBERON:0002616!1.59e-15!59;UBERON:0000955!1.66e-14!69;UBERON:0006238!1.66e-14!69;UBERON:0002780!1.74e-13!41;UBERON:0001890!1.74e-13!41;UBERON:0006240!1.74e-13!41;UBERON:0007023!6.51e-13!115;UBERON:0003080!7.19e-13!42;UBERON:0001017!2.26e-12!82;UBERON:0000073!2.37e-12!94;UBERON:0001016!2.37e-12!94;UBERON:0002346!6.07e-12!90;UBERON:0005743!1.73e-11!86;UBERON:0003075!2.47e-11!86;UBERON:0007284!2.47e-11!86;UBERON:0002020!2.87e-11!34;UBERON:0003528!2.87e-11!34;UBERON:0001869!7.33e-10!32;UBERON:0001893!1.01e-09!34;UBERON:0002791!1.77e-09!33;UBERON:0000956!6.07e-09!25;UBERON:0000203!6.07e-09!25;UBERON:0003056!2.02e-08!61;UBERON:0000153!7.90e-08!129;UBERON:0007811!7.90e-08!129;UBERON:0002619!1.01e-07!22;UBERON:0000033!7.60e-07!123 | |ontology_enrichment_uberon=UBERON:0001049!6.07e-17!57;UBERON:0005068!6.07e-17!57;UBERON:0006241!6.07e-17!57;UBERON:0007135!6.07e-17!57;UBERON:0002616!1.59e-15!59;UBERON:0000955!1.66e-14!69;UBERON:0006238!1.66e-14!69;UBERON:0002780!1.74e-13!41;UBERON:0001890!1.74e-13!41;UBERON:0006240!1.74e-13!41;UBERON:0007023!6.51e-13!115;UBERON:0003080!7.19e-13!42;UBERON:0001017!2.26e-12!82;UBERON:0000073!2.37e-12!94;UBERON:0001016!2.37e-12!94;UBERON:0002346!6.07e-12!90;UBERON:0005743!1.73e-11!86;UBERON:0003075!2.47e-11!86;UBERON:0007284!2.47e-11!86;UBERON:0002020!2.87e-11!34;UBERON:0003528!2.87e-11!34;UBERON:0001869!7.33e-10!32;UBERON:0001893!1.01e-09!34;UBERON:0002791!1.77e-09!33;UBERON:0000956!6.07e-09!25;UBERON:0000203!6.07e-09!25;UBERON:0003056!2.02e-08!61;UBERON:0000153!7.90e-08!129;UBERON:0007811!7.90e-08!129;UBERON:0002619!1.01e-07!22;UBERON:0000033!7.60e-07!123 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;9.44e-11;22!UBERON:0001950;1.79e-09;20!UBERON:0000956;2.54e-09;25!UBERON:0000203;2.54e-09;25!UBERON:0000073;1.75e-08;53!UBERON:0002616;1.75e-08;53!UBERON:0003528;2.00e-08;34!UBERON:0002020;2.00e-08;34!UBERON:0005090;2.97e-08;2!UBERON:0001630;2.97e-08;2!UBERON:0002702;8.89e-08;2!UBERON:0002791;9.72e-08;32!UBERON:0002780;1.02e-07;41!UBERON:0001890;1.02e-07;41!UBERON:0001869;1.08e-07;32!UBERON:0001893;7.28e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.20e-12,53;UBERON:0002616,1.20e-12,53;UBERON:0001049,8.73e-12,56;UBERON:0005068,8.73e-12,56;UBERON:0006241,8.73e-12,56;UBERON:0007135,8.73e-12,56;UBERON:0002619,7.50e-11,22;UBERON:0000955,3.15e-10,68;UBERON:0006238,3.15e-10,68;UBERON:0003528,9.36e-10,34;UBERON:0002020,9.36e-10,34;UBERON:0001950,1.57e-09,20;UBERON:0000956,2.08e-09,25;UBERON:0000203,2.08e-09,25;UBERON:0002780,2.25e-09,41;UBERON:0001890,2.25e-09,41;UBERON:0003080,2.25e-09,41;UBERON:0006240,2.25e-09,41;UBERON:0002791,1.10e-08,32;UBERON:0001869,1.10e-08,32;UBERON:0005090,2.68e-08,2;UBERON:0001630,2.68e-08,2;UBERON:0002702,3.70e-08,2;UBERON:0001893,4.45e-08,34;UBERON:0001017,4.96e-08,81;UBERON:0007023,2.02e-07,114;UBERON:0003075,5.52e-07,82;UBERON:0007284,5.52e-07,82;UBERON:0001016,6.89e-07,89 | |||
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|short_description=p@chr10:31629540..31629582,+ | |short_description=p@chr10:31629540..31629582,+ | ||
}} | }} |
Latest revision as of 13:13, 23 July 2015
Short description: | p@chr10:31629540..31629582, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:31629540..31629582, + |
Coexpression cluster: | C2056_CD4_CD8_CD19_Natural_Neutrophils_diaphragm_cerebellum |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
natural killer cell | 3.61e-12 | 3 |
pro-NK cell | 3.61e-12 | 3 |
lymphoid lineage restricted progenitor cell | 7.35e-08 | 52 |
lymphocyte | 1.16e-07 | 53 |
common lymphoid progenitor | 1.16e-07 | 53 |
mature alpha-beta T cell | 6.46e-07 | 18 |
alpha-beta T cell | 6.46e-07 | 18 |
immature T cell | 6.46e-07 | 18 |
mature T cell | 6.46e-07 | 18 |
immature alpha-beta T cell | 6.46e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 1.20e-12 | 53 |
regional part of brain | 1.20e-12 | 53 |
neural tube | 8.73e-12 | 56 |
neural rod | 8.73e-12 | 56 |
future spinal cord | 8.73e-12 | 56 |
neural keel | 8.73e-12 | 56 |
regional part of cerebral cortex | 7.50e-11 | 22 |
brain | 3.15e-10 | 68 |
future brain | 3.15e-10 | 68 |
brain grey matter | 9.36e-10 | 34 |
gray matter | 9.36e-10 | 34 |
neocortex | 1.57e-09 | 20 |
cerebral cortex | 2.08e-09 | 25 |
pallium | 2.08e-09 | 25 |
regional part of forebrain | 2.25e-09 | 41 |
forebrain | 2.25e-09 | 41 |
anterior neural tube | 2.25e-09 | 41 |
future forebrain | 2.25e-09 | 41 |
regional part of telencephalon | 1.10e-08 | 32 |
cerebral hemisphere | 1.10e-08 | 32 |
muscle structure | 2.68e-08 | 2 |
muscle organ | 2.68e-08 | 2 |
middle frontal gyrus | 3.70e-08 | 2 |
telencephalon | 4.45e-08 | 34 |
central nervous system | 4.96e-08 | 81 |
adult organism | 2.02e-07 | 114 |
neural plate | 5.52e-07 | 82 |
presumptive neural plate | 5.52e-07 | 82 |
nervous system | 6.89e-07 | 89 |