FFCP PHASE1:Hg19::chr10:3930230..3930262,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:3930230..3930262,+ | |||
|coexpression_cluster_id=C151 | |||
|description=CAGE_peak_at_chr10:3930230..3930262,+ | |description=CAGE_peak_at_chr10:3930230..3930262,+ | ||
|id=chr10:3930230..3930262,+ | |id=chr10:3930230..3930262,+ | ||
|ontology_enrichment_celltype=CL:0002057!7.41e-37!42;CL:0000860!1.28e-33!45;CL:0000738!3.08e-32!140;CL:0002031!2.84e-27!124;CL:0000557!9.79e-26!71;CL:0000766!6.47e-25!76;CL:0002087!7.21e-25!119;CL:0002009!9.71e-24!65;CL:0000839!4.18e-23!70;CL:0000988!6.03e-23!182;CL:0000037!1.41e-22!172;CL:0000566!1.41e-22!172;CL:0002032!3.27e-22!165;CL:0000837!3.27e-22!165;CL:0002194!1.25e-21!63;CL:0000576!1.25e-21!63;CL:0000040!1.25e-21!63;CL:0000559!1.25e-21!63;CL:0000763!5.22e-18!112;CL:0000049!5.22e-18!112;CL:0000134!2.60e-10!358;CL:0002320!1.03e-09!365;CL:0000453!1.64e-08!5;CL:0002371!3.72e-08!591;CL:0000219!4.84e-08!390;CL:0000048!5.70e-08!430;CL:0000723!6.09e-08!436;CL:0000034!7.46e-08!444;CL:0000624!2.67e-07!6;CL:0000003!3.51e-07!722;CL:0000144!4.68e-07!625 | |ontology_enrichment_celltype=CL:0002057!7.41e-37!42;CL:0000860!1.28e-33!45;CL:0000738!3.08e-32!140;CL:0002031!2.84e-27!124;CL:0000557!9.79e-26!71;CL:0000766!6.47e-25!76;CL:0002087!7.21e-25!119;CL:0002009!9.71e-24!65;CL:0000839!4.18e-23!70;CL:0000988!6.03e-23!182;CL:0000037!1.41e-22!172;CL:0000566!1.41e-22!172;CL:0002032!3.27e-22!165;CL:0000837!3.27e-22!165;CL:0002194!1.25e-21!63;CL:0000576!1.25e-21!63;CL:0000040!1.25e-21!63;CL:0000559!1.25e-21!63;CL:0000763!5.22e-18!112;CL:0000049!5.22e-18!112;CL:0000134!2.60e-10!358;CL:0002320!1.03e-09!365;CL:0000453!1.64e-08!5;CL:0002371!3.72e-08!591;CL:0000219!4.84e-08!390;CL:0000048!5.70e-08!430;CL:0000723!6.09e-08!436;CL:0000034!7.46e-08!444;CL:0000624!2.67e-07!6;CL:0000003!3.51e-07!722;CL:0000144!4.68e-07!625 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.62e-42;33!CL:0002057;2.62e-42;33!CL:0000473;4.73e-29;39!CL:0000234;4.73e-29;39!CL:0000576;1.49e-23;48!CL:0000766;3.21e-22;69!CL:0000623;4.40e-15;3!CL:0002087;1.18e-14;104!CL:0000767;1.45e-13;3!CL:0000624;3.49e-12;6!CL:0000791;1.36e-11;18!CL:0000789;1.36e-11;18!CL:0002419;1.36e-11;18!CL:0000763;3.70e-10;100!CL:0000097;3.90e-09;5!CL:0000084;4.46e-08;25!CL:0000738;5.32e-08;136!CL:0002393;2.57e-07;6!CL:0002397;2.57e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.40e-47,42;CL:0002057,4.40e-47,42;CL:0000738,3.46e-45,136;CL:0000766,2.91e-42,72;CL:0002031,2.11e-41,120;CL:0000473,1.55e-40,48;CL:0000234,1.55e-40,48;CL:0000557,4.08e-39,67;CL:0002032,5.82e-37,161;CL:0000837,5.82e-37,161;CL:0000839,1.20e-36,66;CL:0000037,4.30e-35,168;CL:0002087,3.20e-33,115;CL:0002009,3.83e-33,61;CL:0000988,6.61e-33,177;CL:0002194,2.27e-31,59;CL:0000576,2.27e-31,59;CL:0000040,2.27e-31,59;CL:0000559,2.27e-31,59;CL:0000763,1.93e-30,108;CL:0000049,1.93e-30,108;CL:0000623,4.73e-15,3;CL:0000825,4.73e-15,3;CL:0000767,1.04e-13,3;CL:0000134,2.26e-12,354;CL:0000624,3.76e-12,6;CL:0002320,5.71e-12,361;CL:0000791,1.33e-11,18;CL:0000789,1.33e-11,18;CL:0002420,1.33e-11,18;CL:0002419,1.33e-11,18;CL:0000790,1.33e-11,18;CL:0000219,1.48e-10,386;CL:0000048,1.40e-09,427;CL:0000723,2.49e-09,433;CL:0000097,4.24e-09,5;CL:0002028,4.24e-09,5;CL:0000034,5.25e-09,441;CL:0000084,4.39e-08,25;CL:0000827,4.39e-08,25;CL:0000838,4.96e-07,52;CL:0000542,7.29e-07,53;CL:0000051,7.29e-07,53 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-32;42!CL:0000790;1.36e-11;18 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.08e-22!80;UBERON:0002390!1.47e-20!102;UBERON:0003061!1.47e-20!102;UBERON:0001474!3.09e-20!86;UBERON:0002193!1.30e-18!112;UBERON:0004765!2.08e-17!101;UBERON:0001434!2.08e-17!101;UBERON:0002405!1.26e-15!115;UBERON:0003081!6.27e-11!216;UBERON:0002384!6.63e-09!375;UBERON:0002204!4.47e-08!167 | |ontology_enrichment_uberon=UBERON:0002371!1.08e-22!80;UBERON:0002390!1.47e-20!102;UBERON:0003061!1.47e-20!102;UBERON:0001474!3.09e-20!86;UBERON:0002193!1.30e-18!112;UBERON:0004765!2.08e-17!101;UBERON:0001434!2.08e-17!101;UBERON:0002405!1.26e-15!115;UBERON:0003081!6.27e-11!216;UBERON:0002384!6.63e-09!375;UBERON:0002204!4.47e-08!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.00e-34,76;UBERON:0002405,3.49e-31,93;UBERON:0001474,6.21e-31,82;UBERON:0004765,1.13e-27,90;UBERON:0002390,4.56e-27,98;UBERON:0003061,4.56e-27,98;UBERON:0002193,5.38e-26,108;UBERON:0001434,2.51e-24,100;UBERON:0002204,3.20e-12,167;UBERON:0003081,5.99e-12,203;UBERON:0002384,2.01e-11,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,1.57345710739562,2.68680578668049,1.85779347979291,0,0,0,0,0,0,2.21598163412751,3.40925560699241,3.90619567288533,0,0,0,0,0.377875943688809,0.970336244751265,0.697287110717054,0.411167888021826,1.85823822537062,2.01384674625505,1.7931249457037,4.7296445977717,5.17118521104928,7.10033151942209,8.12558919566051,0.188242339542605,0.545812300115692,1.34834090667051,4.28517449319264,5.45579346029359,12.7867425159808,0,0.398927315243264,1.70489900213078,1.45104619314292,3.40431134814684,4.35975574296902,0.502497330513487,0.521482918420201,1.73751075764093,3.63239701580021,3.68277635987565,4.1140110367315,0.422510572623884,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,1.96709770113833,5.10913991573914,4.11202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0,1.14966148080576,2.40539211837841,2.53019692019503,0,0,0,0.150575119077773,0,0,0,0,7.66105624253983,9.09296665663925,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,1.00416183829401,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,4.14656231081544,4.03535869567492,9.08945520669936,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,4.13764596424047,9.05635814409973,6.67383788654692,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0.751288044986092,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.779441235357554,1.19578356282027,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0.0821005894499457,0,1.57345710739562,2.68680578668049,1.85779347979291,0,0,0,0,0,0,2.21598163412751,3.40925560699241,3.90619567288533,0,0,0,0,0.377875943688809,0.970336244751265,0.697287110717054,0.411167888021826,1.85823822537062,2.01384674625505,1.7931249457037,4.7296445977717,5.17118521104928,7.10033151942209,8.12558919566051,0.188242339542605,0.545812300115692,1.34834090667051,4.28517449319264,5.45579346029359,12.7867425159808,0,0.398927315243264,1.70489900213078,1.45104619314292,3.40431134814684,4.35975574296902,0.502497330513487,0.521482918420201,1.73751075764093,3.63239701580021,3.68277635987565,4.1140110367315,0.422510572623884,0,0,0,0,0,0.285012743741249,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0.560508562981536,0,1.96709770113833,5.10913991573914,4.11202997999018,0,0,0,0,0.111410456885174,0.294605907474837,0.443067789167242,0.270803863765016,0,0.130059347559878,0,0.276350017785848,0.289803085735052,0,0.267540828089713,0,0,1.14966148080576,2.40539211837841,2.53019692019503,0,0,0,0.150575119077773,0,0,0,0,7.66105624253983,9.09296665663925,2.89648807765598,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0.347140501607594,0,0,0,0,0,0,1.00416183829401,0,0,0.24406205754817,0,0,0,0,0,1.53316637465883,0.949265659568129,0,0,0,0,0,0,0.529636723252875,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0.300091096084402,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.573609190778008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0.141775097242386,0.0895585227028483,0,0,0,0,4.14656231081544,4.03535869567492,9.08945520669936,0,0,0,0,0,0,0,0.112131084345361,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,4.13764596424047,9.05635814409973,6.67383788654692,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0,0.647142602455851,0.853820462427555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0,0,0.31481234683064,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0.284136146806413,0,0,0,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,0,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0.123563938946503,0,0,0,0,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0.415440338029185,0.449947783103001,1.5476039091159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0.15543720058278,0,0,0,0.155262956876259,0.414706207840855,0,0,0.751288044986092,0,0,0.363697318405119,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0.779441235357554,1.19578356282027,0.817826971279221,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,0,0,0,0,0,0,0,0.31020638566432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:3930230..3930262,+ | |short_description=p@chr10:3930230..3930262,+ | ||
}} | }} |
Latest revision as of 13:38, 23 July 2015
Short description: | p@chr10:3930230..3930262, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:3930230..3930262, + |
Coexpression cluster: | C151_CD14_Natural_Basophils_CD8_Eosinophils_CD4_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.00e-34 | 76 |
immune system | 3.49e-31 | 93 |
bone element | 6.21e-31 | 82 |
skeletal element | 1.13e-27 | 90 |
hematopoietic system | 4.56e-27 | 98 |
blood island | 4.56e-27 | 98 |
hemolymphoid system | 5.38e-26 | 108 |
skeletal system | 2.51e-24 | 100 |
musculoskeletal system | 3.20e-12 | 167 |
lateral plate mesoderm | 5.99e-12 | 203 |
connective tissue | 2.01e-11 | 371 |