FFCP PHASE1:Hg19::chr10:80732663..80732675,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:80732663..80732675,+ | |||
|coexpression_cluster_id=C728 | |||
|description=CAGE_peak_at_chr10:80732663..80732675,+ | |||
|id=chr10:80732663..80732675,+ | |||
|ontology_enrichment_celltype=CL:0000860!1.08e-54!45;CL:0000766!5.92e-54!76;CL:0002057!3.34e-53!42;CL:0000557!5.53e-53!71;CL:0000839!1.97e-51!70;CL:0002009!5.79e-45!65;CL:0002194!2.45e-44!63;CL:0000576!2.45e-44!63;CL:0000040!2.45e-44!63;CL:0000559!2.45e-44!63;CL:0000763!4.40e-37!112;CL:0000049!4.40e-37!112;CL:0000738!1.05e-26!140;CL:0002031!1.05e-24!124;CL:0000037!3.41e-21!172;CL:0000566!3.41e-21!172;CL:0002032!1.38e-20!165;CL:0000837!1.38e-20!165;CL:0002087!2.16e-20!119;CL:0000988!3.06e-19!182;CL:0002274!8.38e-12!5;CL:0000457!8.38e-12!5;CL:0002191!8.38e-12!5;CL:0000097!8.38e-12!5;CL:0000831!8.38e-12!5;CL:0002028!8.38e-12!5;CL:0000134!9.06e-12!358;CL:0002320!3.23e-11!365;CL:0000219!6.86e-11!390;CL:0000048!3.65e-10!430;CL:0000034!7.60e-10!444;CL:0000723!8.93e-10!436;CL:0000767!1.80e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.79e-100;33!CL:0002057;1.79e-100;33!CL:0000473;4.04e-73;39!CL:0000234;4.04e-73;39!CL:0000576;4.36e-51;48!CL:0000766;3.43e-41;69!CL:0000097;7.02e-20;5!CL:0000763;1.92e-18;100!CL:0002087;3.20e-14;104!CL:0000738;5.41e-12;136!CL:0000163;4.03e-11;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.83e-101,42;CL:0002057,8.83e-101,42;CL:0000473,2.14e-94,48;CL:0000234,2.14e-94,48;CL:0000839,7.22e-88,66;CL:0000557,1.69e-86,67;CL:0000766,1.82e-85,72;CL:0002194,1.67e-74,59;CL:0000576,1.67e-74,59;CL:0000040,1.67e-74,59;CL:0000559,1.67e-74,59;CL:0002009,6.16e-72,61;CL:0000763,1.73e-55,108;CL:0000049,1.73e-55,108;CL:0002031,2.79e-46,120;CL:0000738,4.79e-43,136;CL:0002087,4.86e-36,115;CL:0002032,1.46e-35,161;CL:0000837,1.46e-35,161;CL:0000037,7.30e-34,168;CL:0000988,7.14e-32,177;CL:0000097,6.53e-20,5;CL:0002028,6.53e-20,5;CL:0000134,3.64e-13,354;CL:0002320,8.48e-13,361;CL:0000219,1.66e-11,386;CL:0000163,3.88e-11,9;CL:0000048,6.38e-10,427;CL:0000723,1.06e-09,433;CL:0000034,2.02e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;1.06e-72;42!CL:0000049;3.76e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.29e-48!80;UBERON:0001474!1.75e-43!86;UBERON:0002390!6.20e-38!102;UBERON:0003061!6.20e-38!102;UBERON:0004765!8.52e-37!101;UBERON:0001434!8.52e-37!101;UBERON:0002405!1.83e-35!115;UBERON:0002193!5.74e-35!112;UBERON:0002204!3.16e-22!167;UBERON:0003081!4.60e-18!216;UBERON:0002384!1.81e-10!375;UBERON:0000926!3.14e-08!448;UBERON:0004120!3.14e-08!448;UBERON:0006603!3.14e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.95e-76,76;UBERON:0001474,6.47e-70,82;UBERON:0004765,2.65e-63,90;UBERON:0002405,4.11e-61,93;UBERON:0002390,9.31e-58,98;UBERON:0003061,9.31e-58,98;UBERON:0001434,1.65e-56,100;UBERON:0002193,5.74e-52,108;UBERON:0002204,8.25e-32,167;UBERON:0003081,3.20e-25,203;UBERON:0000926,2.80e-14,315;UBERON:0004120,2.80e-14,315;UBERON:0006603,2.80e-14,315;UBERON:0002384,2.68e-12,371 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,1.15148819429164,0.928896739896456,0,0,0,0,0,0,1.10799081706375,2.20598892217156,0.868043482863407,0,0,0,1.01778767145695,1.51150377475524,0.727752183563449,3.95129362739664,3.70051099219643,1.54853185447552,2.01384674625505,2.30544635876191,3.07426898855161,1.37898272294647,4.51839278508678,9.47985406160392,1.50593871634084,4.09359225086769,2.9214052977861,2.14258724659632,6.09765151444578,1.91801137739712,0.329851300186716,0.997318288108159,0.852449501065388,3.48251086354301,5.10646702222026,3.73693349397345,1.7587406567972,1.0429658368404,3.9093992046921,0,2.20966581592539,2.53169909952708,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0.198762407366705,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168584690078102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0.246217006087397,0.234004265139238,0,0,0,0,0,0,0,1.47798971368783,0.264145302039678,6.63449969730471,2.30591925467138,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869932992075073,0,0,0.372158369359667,0,0,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0.251932747854276,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0.167821586975843,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0,0,0,0.664653872707185,0,0.627865836814451,0,0,0,0,0,0,0,0,0.0967563312890851,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157566364614447,0,0,0.295282444544246,0,0,0,0,0,0,0.2249738915515,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0.612691153526923,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0,0,0,0.363697318405119,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:80732663..80732675,+ | |||
}} |
Latest revision as of 15:51, 23 July 2015
Short description: | p@chr10:80732663..80732675, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:80732663..80732675, + |
Coexpression cluster: | C728_Mast_CD14_Basophils_chorionic_immature_Monocytederived_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.83e-101 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.83e-101 | 42 |
defensive cell | 2.14e-94 | 48 |
phagocyte | 2.14e-94 | 48 |
myeloid lineage restricted progenitor cell | 7.22e-88 | 66 |
granulocyte monocyte progenitor cell | 1.69e-86 | 67 |
myeloid leukocyte | 1.82e-85 | 72 |
monopoietic cell | 1.67e-74 | 59 |
monocyte | 1.67e-74 | 59 |
monoblast | 1.67e-74 | 59 |
promonocyte | 1.67e-74 | 59 |
macrophage dendritic cell progenitor | 6.16e-72 | 61 |
myeloid cell | 1.73e-55 | 108 |
common myeloid progenitor | 1.73e-55 | 108 |
hematopoietic lineage restricted progenitor cell | 2.79e-46 | 120 |
leukocyte | 4.79e-43 | 136 |
nongranular leukocyte | 4.86e-36 | 115 |
hematopoietic oligopotent progenitor cell | 1.46e-35 | 161 |
hematopoietic multipotent progenitor cell | 1.46e-35 | 161 |
hematopoietic stem cell | 7.30e-34 | 168 |
hematopoietic cell | 7.14e-32 | 177 |
mast cell | 6.53e-20 | 5 |
basophil mast progenitor cell | 6.53e-20 | 5 |
mesenchymal cell | 3.64e-13 | 354 |
connective tissue cell | 8.48e-13 | 361 |
motile cell | 1.66e-11 | 386 |
endocrine cell | 3.88e-11 | 9 |
multi fate stem cell | 6.38e-10 | 427 |
somatic stem cell | 1.06e-09 | 433 |
stem cell | 2.02e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.95e-76 | 76 |
bone element | 6.47e-70 | 82 |
skeletal element | 2.65e-63 | 90 |
immune system | 4.11e-61 | 93 |
hematopoietic system | 9.31e-58 | 98 |
blood island | 9.31e-58 | 98 |
skeletal system | 1.65e-56 | 100 |
hemolymphoid system | 5.74e-52 | 108 |
musculoskeletal system | 8.25e-32 | 167 |
lateral plate mesoderm | 3.20e-25 | 203 |
mesoderm | 2.80e-14 | 315 |
mesoderm-derived structure | 2.80e-14 | 315 |
presumptive mesoderm | 2.80e-14 | 315 |
connective tissue | 2.68e-12 | 371 |