FFCP PHASE1:Hg19::chr10:91099381..91099392,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr10:91099381..91099392,+
|short_description=p@chr10:91099381..91099392,+
|description=CAGE_peak_at_chr10:91099381..91099392,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:91099381..91099392,+ | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr10:91099381..91099392,+ | |||
|id=chr10:91099381..91099392,+ | |||
|ontology_enrichment_celltype=CL:0002057!4.26e-20!42;CL:0000860!2.45e-18!45;CL:0002194!2.03e-12!63;CL:0000576!2.03e-12!63;CL:0000040!2.03e-12!63;CL:0000559!2.03e-12!63;CL:0002009!7.41e-12!65;CL:0000766!1.24e-11!76;CL:0000839!1.35e-10!70;CL:0000557!2.29e-10!71 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.60e-48;33!CL:0002057;1.60e-48;33!CL:0000473;1.86e-35;39!CL:0000234;1.86e-35;39!CL:0000576;7.53e-27;48!CL:0002379;2.25e-14;1!CL:0000766;2.65e-13;69!CL:0000763;7.99e-11;100!CL:0002087;1.87e-08;104!CL:0002593;4.38e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.80e-44,42;CL:0002057,7.80e-44,42;CL:0000473,3.27e-38,48;CL:0000234,3.27e-38,48;CL:0002194,2.47e-30,59;CL:0000576,2.47e-30,59;CL:0000040,2.47e-30,59;CL:0000559,2.47e-30,59;CL:0002009,2.57e-29,61;CL:0000766,3.66e-29,72;CL:0000839,4.90e-27,66;CL:0000557,1.28e-26,67;CL:0000763,4.40e-19,108;CL:0000049,4.40e-19,108;CL:0002087,4.61e-15,115;CL:0000738,6.88e-15,136;CL:0002379,1.61e-14,1;CL:0002031,2.20e-14,120;CL:0002032,2.32e-12,161;CL:0000837,2.32e-12,161;CL:0000037,8.73e-12,168;CL:0000988,4.12e-11,177;CL:0002593,4.09e-08,2 | |||
|ontology_enrichment_development_v019=CL:0002057;6.44e-31;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3620;2.25e-14;1!DOID:3565;2.25e-14;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3620,1.61e-14,1;DOID:3565,1.61e-14,1 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.43e-08!80;UBERON:0001474!2.19e-08!86;UBERON:0004765!8.92e-08!101;UBERON:0001434!8.92e-08!101;UBERON:0002390!9.85e-08!102;UBERON:0003061!9.85e-08!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002456;4.38e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.31e-23,76;UBERON:0001474,1.40e-21,82;UBERON:0004765,1.43e-19,90;UBERON:0002405,6.65e-19,93;UBERON:0002390,6.99e-18,98;UBERON:0003061,6.99e-18,98;UBERON:0001434,1.68e-17,100;UBERON:0002193,4.06e-16,108;UBERON:0002204,7.06e-12,167;UBERON:0003081,1.66e-09,203;UBERON:0002456,4.09e-08,2 | |||
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| ||
|short_description=p@chr10:91099381..91099392,+ | |||
}} | }} |
Latest revision as of 16:37, 23 July 2015
Short description: | p@chr10:91099381..91099392, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:91099381..91099392, + |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.80e-44 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.80e-44 | 42 |
defensive cell | 3.27e-38 | 48 |
phagocyte | 3.27e-38 | 48 |
monopoietic cell | 2.47e-30 | 59 |
monocyte | 2.47e-30 | 59 |
monoblast | 2.47e-30 | 59 |
promonocyte | 2.47e-30 | 59 |
macrophage dendritic cell progenitor | 2.57e-29 | 61 |
myeloid leukocyte | 3.66e-29 | 72 |
myeloid lineage restricted progenitor cell | 4.90e-27 | 66 |
granulocyte monocyte progenitor cell | 1.28e-26 | 67 |
myeloid cell | 4.40e-19 | 108 |
common myeloid progenitor | 4.40e-19 | 108 |
nongranular leukocyte | 4.61e-15 | 115 |
leukocyte | 6.88e-15 | 136 |
meningothelial cell | 1.61e-14 | 1 |
hematopoietic lineage restricted progenitor cell | 2.20e-14 | 120 |
hematopoietic oligopotent progenitor cell | 2.32e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-12 | 161 |
hematopoietic stem cell | 8.73e-12 | 168 |
hematopoietic cell | 4.12e-11 | 177 |
smooth muscle cell of the internal thoracic artery | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.31e-23 | 76 |
bone element | 1.40e-21 | 82 |
skeletal element | 1.43e-19 | 90 |
immune system | 6.65e-19 | 93 |
hematopoietic system | 6.99e-18 | 98 |
blood island | 6.99e-18 | 98 |
skeletal system | 1.68e-17 | 100 |
hemolymphoid system | 4.06e-16 | 108 |
musculoskeletal system | 7.06e-12 | 167 |
lateral plate mesoderm | 1.66e-09 | 203 |
internal thoracic artery | 4.09e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
central nervous system cancer | 1.61e-14 | 1 |
meningioma | 1.61e-14 | 1 |