FFCP PHASE1:Hg19::chr11:117860734..117860750,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:117860734..117860750,+ | |||
|coexpression_cluster_id=C1560 | |coexpression_cluster_id=C1560 | ||
|description=CAGE_peak_at_chr11:117860734..117860750,+ | |description=CAGE_peak_at_chr11:117860734..117860750,+ | ||
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|ontology_enrichment_celltype=CL:0002009!8.60e-60!65;CL:0000766!1.73e-59!76;CL:0002194!2.48e-59!63;CL:0000576!2.48e-59!63;CL:0000040!2.48e-59!63;CL:0000559!2.48e-59!63;CL:0000557!1.52e-53!71;CL:0002057!4.34e-52!42;CL:0000839!5.16e-52!70;CL:0000860!7.51e-48!45;CL:0000763!2.34e-40!112;CL:0000049!2.34e-40!112;CL:0000738!1.49e-37!140;CL:0002087!2.63e-33!119;CL:0002031!1.38e-28!124;CL:0000037!2.29e-27!172;CL:0000566!2.29e-27!172;CL:0002032!1.13e-25!165;CL:0000837!1.13e-25!165;CL:0000988!6.23e-25!182;CL:0002393!1.17e-14!9;CL:0002397!1.17e-14!9;CL:0002619!6.17e-08!3;CL:0000990!7.52e-08!8;CL:0000875!1.37e-07!3;CL:0002396!1.37e-07!3;CL:0000767!7.17e-07!3 | |ontology_enrichment_celltype=CL:0002009!8.60e-60!65;CL:0000766!1.73e-59!76;CL:0002194!2.48e-59!63;CL:0000576!2.48e-59!63;CL:0000040!2.48e-59!63;CL:0000559!2.48e-59!63;CL:0000557!1.52e-53!71;CL:0002057!4.34e-52!42;CL:0000839!5.16e-52!70;CL:0000860!7.51e-48!45;CL:0000763!2.34e-40!112;CL:0000049!2.34e-40!112;CL:0000738!1.49e-37!140;CL:0002087!2.63e-33!119;CL:0002031!1.38e-28!124;CL:0000037!2.29e-27!172;CL:0000566!2.29e-27!172;CL:0002032!1.13e-25!165;CL:0000837!1.13e-25!165;CL:0000988!6.23e-25!182;CL:0002393!1.17e-14!9;CL:0002397!1.17e-14!9;CL:0002619!6.17e-08!3;CL:0000990!7.52e-08!8;CL:0000875!1.37e-07!3;CL:0002396!1.37e-07!3;CL:0000767!7.17e-07!3 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002194,4.94e-58,59;CL:0000576,4.94e-58,59;CL:0000040,4.94e-58,59;CL:0000559,4.94e-58,59;CL:0002009,4.66e-56,61;CL:0000766,6.81e-52,72;CL:0000839,1.23e-51,66;CL:0000557,7.85e-51,67;CL:0000473,4.82e-36,48;CL:0000234,4.82e-36,48;CL:0000763,1.15e-33,108;CL:0000049,1.15e-33,108;CL:0002087,1.90e-28,115;CL:0002031,3.91e-27,120;CL:0002619,1.47e-26,3;CL:0000738,4.27e-26,136;CL:0000875,3.36e-25,3;CL:0002396,3.36e-25,3;CL:0000235,7.97e-23,6;CL:0002393,1.30e-22,9;CL:0002397,1.30e-22,9;CL:0000860,8.29e-22,42;CL:0002057,8.29e-22,42;CL:0002032,1.54e-21,161;CL:0000837,1.54e-21,161;CL:0000037,1.67e-20,168;CL:0000988,2.73e-19,177;CL:0000840,1.28e-13,5;CL:0001029,1.28e-13,5;CL:0000990,3.01e-09,8;CL:0000134,7.35e-08,354;CL:0000451,1.20e-07,10;CL:0002320,1.23e-07,361;CL:0000219,7.67e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.25e-15;42!CL:0000049;8.42e-13;108 | |ontology_enrichment_development_v019=CL:0002057;1.25e-15;42!CL:0000049;8.42e-13;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!6.32e-46!80;UBERON:0002390!1.03e-45!102;UBERON:0003061!1.03e-45!102;UBERON:0002193!7.64e-42!112;UBERON:0001474!9.92e-42!86;UBERON:0002405!1.87e-35!115;UBERON:0004765!1.98e-33!101;UBERON:0001434!1.98e-33!101;UBERON:0003081!2.04e-18!216;UBERON:0002204!1.40e-17!167;UBERON:0007023!6.85e-08!115;UBERON:0000926!6.04e-07!448;UBERON:0004120!6.04e-07!448;UBERON:0006603!6.04e-07!448 | |ontology_enrichment_uberon=UBERON:0002371!6.32e-46!80;UBERON:0002390!1.03e-45!102;UBERON:0003061!1.03e-45!102;UBERON:0002193!7.64e-42!112;UBERON:0001474!9.92e-42!86;UBERON:0002405!1.87e-35!115;UBERON:0004765!1.98e-33!101;UBERON:0001434!1.98e-33!101;UBERON:0003081!2.04e-18!216;UBERON:0002204!1.40e-17!167;UBERON:0007023!6.85e-08!115;UBERON:0000926!6.04e-07!448;UBERON:0004120!6.04e-07!448;UBERON:0006603!6.04e-07!448 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.77e-12;3!UBERON:0004177;1.89e-07;5!UBERON:0005057;1.89e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0002106;7.77e-12;3!UBERON:0004177;1.89e-07;5!UBERON:0005057;1.89e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.63e-44,76;UBERON:0002405,1.89e-43,93;UBERON:0002390,4.35e-41,98;UBERON:0003061,4.35e-41,98;UBERON:0001474,4.60e-41,82;UBERON:0004765,3.62e-37,90;UBERON:0002193,5.19e-37,108;UBERON:0001434,3.66e-33,100;UBERON:0002204,1.35e-18,167;UBERON:0003081,3.64e-18,203;UBERON:0002106,9.18e-12,3;UBERON:0004854,9.18e-12,3;UBERON:0009034,9.18e-12,3;UBERON:0002095,9.18e-12,3;UBERON:0004782,9.18e-12,3;UBERON:0003281,9.18e-12,3;UBERON:0009664,9.18e-12,3;UBERON:0002296,9.18e-12,3;UBERON:0005602,9.18e-12,3;UBERON:0001179,9.18e-12,3;UBERON:0006293,9.18e-12,3;UBERON:0000926,1.95e-10,315;UBERON:0004120,1.95e-10,315;UBERON:0006603,1.95e-10,315;UBERON:0002384,2.50e-07,371 | |||
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|short_description=p@chr11:117860734..117860750,+ | |short_description=p@chr11:117860734..117860750,+ | ||
}} | }} |
Latest revision as of 18:41, 23 July 2015
Short description: | p@chr11:117860734..117860750, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:117860734..117860750, + |
Coexpression cluster: | C1560_CD14_Dendritic_Macrophage_dura_Monocytederived_lymph_left |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.63e-44 | 76 |
immune system | 1.89e-43 | 93 |
hematopoietic system | 4.35e-41 | 98 |
blood island | 4.35e-41 | 98 |
bone element | 4.60e-41 | 82 |
skeletal element | 3.62e-37 | 90 |
hemolymphoid system | 5.19e-37 | 108 |
skeletal system | 3.66e-33 | 100 |
musculoskeletal system | 1.35e-18 | 167 |
lateral plate mesoderm | 3.64e-18 | 203 |
spleen | 9.18e-12 | 3 |
gastrointestinal system mesentery | 9.18e-12 | 3 |
stomach region | 9.18e-12 | 3 |
mesentery | 9.18e-12 | 3 |
gastrointestinal system serosa | 9.18e-12 | 3 |
mesentery of stomach | 9.18e-12 | 3 |
gut mesentery | 9.18e-12 | 3 |
dorsal mesentery | 9.18e-12 | 3 |
dorsal mesogastrium | 9.18e-12 | 3 |
peritoneal cavity | 9.18e-12 | 3 |
spleen primordium | 9.18e-12 | 3 |
mesoderm | 1.95e-10 | 315 |
mesoderm-derived structure | 1.95e-10 | 315 |
presumptive mesoderm | 1.95e-10 | 315 |
connective tissue | 2.50e-07 | 371 |