FFCP PHASE1:Hg19::chr12:109219532..109219543,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:109219532..109219543,+ | |||
|description=CAGE_peak_at_chr12:109219532..109219543,+ | |description=CAGE_peak_at_chr12:109219532..109219543,+ | ||
|id=chr12:109219532..109219543,+ | |id=chr12:109219532..109219543,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.47e-23!42;CL:0000860!3.81e-21!45;CL:0000557!1.68e-18!71;CL:0000766!1.02e-17!76;CL:0002009!1.42e-17!65;CL:0000839!1.50e-17!70;CL:0002194!4.90e-17!63;CL:0000576!4.90e-17!63;CL:0000040!4.90e-17!63;CL:0000559!4.90e-17!63;CL:0000134!7.54e-16!358;CL:0002320!1.26e-15!365;CL:0000048!1.57e-15!430;CL:0000219!4.19e-15!390;CL:0000723!6.41e-15!436;CL:0000034!3.92e-14!444;CL:0000763!7.35e-11!112;CL:0000049!7.35e-11!112;CL:0002371!2.91e-10!591;CL:0002031!6.07e-10!124;CL:0000738!7.80e-09!140;CL:0000144!1.89e-08!625;CL:0002087!3.45e-08!119;CL:0000569!1.62e-07!4;CL:0000011!1.62e-07!4;CL:0000988!6.62e-07!182;CL:0002032!7.55e-07!165;CL:0000837!7.55e-07!165 | |ontology_enrichment_celltype=CL:0002057!2.47e-23!42;CL:0000860!3.81e-21!45;CL:0000557!1.68e-18!71;CL:0000766!1.02e-17!76;CL:0002009!1.42e-17!65;CL:0000839!1.50e-17!70;CL:0002194!4.90e-17!63;CL:0000576!4.90e-17!63;CL:0000040!4.90e-17!63;CL:0000559!4.90e-17!63;CL:0000134!7.54e-16!358;CL:0002320!1.26e-15!365;CL:0000048!1.57e-15!430;CL:0000219!4.19e-15!390;CL:0000723!6.41e-15!436;CL:0000034!3.92e-14!444;CL:0000763!7.35e-11!112;CL:0000049!7.35e-11!112;CL:0002371!2.91e-10!591;CL:0002031!6.07e-10!124;CL:0000738!7.80e-09!140;CL:0000144!1.89e-08!625;CL:0002087!3.45e-08!119;CL:0000569!1.62e-07!4;CL:0000011!1.62e-07!4;CL:0000988!6.62e-07!182;CL:0002032!7.55e-07!165;CL:0000837!7.55e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.75e-27;33!CL:0002057;8.75e-27;33!CL:0000473;8.49e-21;39!CL:0000234;8.49e-21;39!CL:0000576;2.96e-12;48!CL:0000766;2.69e-09;69!CL:0002601;3.39e-09;1!CL:0000569;5.73e-09;4 | |ontology_enrichment_celltype_v019=CL:0000860;8.75e-27;33!CL:0002057;8.75e-27;33!CL:0000473;8.49e-21;39!CL:0000234;8.49e-21;39!CL:0000576;2.96e-12;48!CL:0000766;2.69e-09;69!CL:0002601;3.39e-09;1!CL:0000569;5.73e-09;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.75e-22,48;CL:0000234,5.75e-22,48;CL:0000860,3.19e-21,42;CL:0002057,3.19e-21,42;CL:0002194,3.65e-17,59;CL:0000576,3.65e-17,59;CL:0000040,3.65e-17,59;CL:0000559,3.65e-17,59;CL:0002009,1.52e-16,61;CL:0000839,3.73e-15,66;CL:0000557,6.68e-15,67;CL:0000766,9.70e-14,72;CL:0002601,5.28e-09,1;CL:0000569,5.51e-09,4;CL:0000011,5.51e-09,4;CL:0000763,1.61e-08,108;CL:0000049,1.61e-08,108;CL:0002087,7.00e-08,115;CL:0002031,1.80e-07,120;CL:0000134,3.19e-07,354;CL:0000219,4.15e-07,386;CL:0002320,5.24e-07,361;CL:0000048,5.89e-07,427;CL:0000723,8.39e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-16;42!CL:0000011;5.73e-09;4 | |ontology_enrichment_development_v019=CL:0002057;1.48e-16;42!CL:0000011;5.73e-09;4 | ||
|ontology_enrichment_disease=DOID:2394!1.75e-07!14 | |ontology_enrichment_disease=DOID:2394!1.75e-07!14 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.34e-19!80;UBERON:0001474!3.87e-18!86;UBERON:0002390!8.39e-16!102;UBERON:0003061!8.39e-16!102;UBERON:0004765!1.41e-15!101;UBERON:0001434!1.41e-15!101;UBERON:0002384!1.64e-14!375;UBERON:0002193!2.97e-14!112;UBERON:0002204!1.71e-12!167;UBERON:0002405!2.62e-11!115;UBERON:0003081!1.31e-09!216 | |ontology_enrichment_uberon=UBERON:0002371!4.34e-19!80;UBERON:0001474!3.87e-18!86;UBERON:0002390!8.39e-16!102;UBERON:0003061!8.39e-16!102;UBERON:0004765!1.41e-15!101;UBERON:0001434!1.41e-15!101;UBERON:0002384!1.64e-14!375;UBERON:0002193!2.97e-14!112;UBERON:0002204!1.71e-12!167;UBERON:0002405!2.62e-11!115;UBERON:0003081!1.31e-09!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.13e-18,76;UBERON:0001474,1.84e-16,82;UBERON:0004765,8.56e-15,90;UBERON:0002405,3.05e-14,93;UBERON:0002390,2.14e-13,98;UBERON:0003061,2.14e-13,98;UBERON:0001434,4.42e-13,100;UBERON:0002193,6.17e-12,108;UBERON:0002204,2.41e-09,167;UBERON:0003081,2.44e-08,203;UBERON:0000926,1.28e-07,315;UBERON:0004120,1.28e-07,315;UBERON:0006603,1.28e-07,315 | |||
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| ||
|short_description=p@chr12:109219532..109219543,+ | |short_description=p@chr12:109219532..109219543,+ | ||
}} | }} |
Latest revision as of 04:40, 24 July 2015
Short description: | p@chr12:109219532..109219543, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:109219532..109219543, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.75e-22 | 48 |
phagocyte | 5.75e-22 | 48 |
classical monocyte | 3.19e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.19e-21 | 42 |
monopoietic cell | 3.65e-17 | 59 |
monocyte | 3.65e-17 | 59 |
monoblast | 3.65e-17 | 59 |
promonocyte | 3.65e-17 | 59 |
macrophage dendritic cell progenitor | 1.52e-16 | 61 |
myeloid lineage restricted progenitor cell | 3.73e-15 | 66 |
granulocyte monocyte progenitor cell | 6.68e-15 | 67 |
myeloid leukocyte | 9.70e-14 | 72 |
uterine smooth muscle cell | 5.28e-09 | 1 |
cardiac mesenchymal cell | 5.51e-09 | 4 |
migratory trunk neural crest cell | 5.51e-09 | 4 |
myeloid cell | 1.61e-08 | 108 |
common myeloid progenitor | 1.61e-08 | 108 |
nongranular leukocyte | 7.00e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 1.80e-07 | 120 |
mesenchymal cell | 3.19e-07 | 354 |
motile cell | 4.15e-07 | 386 |
connective tissue cell | 5.24e-07 | 361 |
multi fate stem cell | 5.89e-07 | 427 |
somatic stem cell | 8.39e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.13e-18 | 76 |
bone element | 1.84e-16 | 82 |
skeletal element | 8.56e-15 | 90 |
immune system | 3.05e-14 | 93 |
hematopoietic system | 2.14e-13 | 98 |
blood island | 2.14e-13 | 98 |
skeletal system | 4.42e-13 | 100 |
hemolymphoid system | 6.17e-12 | 108 |
musculoskeletal system | 2.41e-09 | 167 |
lateral plate mesoderm | 2.44e-08 | 203 |
mesoderm | 1.28e-07 | 315 |
mesoderm-derived structure | 1.28e-07 | 315 |
presumptive mesoderm | 1.28e-07 | 315 |