FFCP PHASE1:Hg19::chr12:130388744..130388782,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:130388744..130388782,- | |||
|coexpression_cluster_id=C3253 | |||
|description=CAGE_peak_at_chr12:130388744..130388782,- | |description=CAGE_peak_at_chr12:130388744..130388782,- | ||
|id=chr12:130388744..130388782,- | |id=chr12:130388744..130388782,- | ||
|ontology_enrichment_celltype=CL:0000133!2.07e-15!59;CL:0000333!5.76e-13!41;CL:0000147!4.50e-12!14;CL:0002319!9.23e-12!25;CL:0000221!3.14e-11!71;CL:0000148!6.99e-11!10;CL:0000541!6.99e-11!10;CL:0000095!4.51e-09!17;CL:0000123!4.51e-09!17;CL:0000075!9.45e-09!27;CL:0000710!2.01e-08!20;CL:0002322!4.13e-08!5;CL:0000128!7.58e-08!7;CL:0000126!7.58e-08!7;CL:0000127!7.58e-08!7;CL:0002453!7.58e-08!7;CL:0000243!9.66e-08!15;CL:0000125!9.66e-08!15;CL:0000030!9.66e-08!15;CL:0000339!9.66e-08!15 | |ontology_enrichment_celltype=CL:0000133!2.07e-15!59;CL:0000333!5.76e-13!41;CL:0000147!4.50e-12!14;CL:0002319!9.23e-12!25;CL:0000221!3.14e-11!71;CL:0000148!6.99e-11!10;CL:0000541!6.99e-11!10;CL:0000095!4.51e-09!17;CL:0000123!4.51e-09!17;CL:0000075!9.45e-09!27;CL:0000710!2.01e-08!20;CL:0002322!4.13e-08!5;CL:0000128!7.58e-08!7;CL:0000126!7.58e-08!7;CL:0000127!7.58e-08!7;CL:0002453!7.58e-08!7;CL:0000243!9.66e-08!15;CL:0000125!9.66e-08!15;CL:0000030!9.66e-08!15;CL:0000339!9.66e-08!15 | ||
|ontology_enrichment_celltype_v019=CL:0000148;6.39e-18;10!CL:0000710;4.47e-15;20!CL:0000075;1.81e-14;27!CL:0002322;1.25e-12;5!CL:0000147;2.89e-12;14!CL:0000128;1.97e-09;7!CL:0000126;1.97e-09;7!CL:0000127;1.97e-09;7!CL:0002605;3.59e-09;3!CL:0002319;9.14e-09;25!CL:0000064;9.88e-09;3!CL:0000067;9.88e-09;3!CL:0005012;9.88e-09;3!CL:0002304;9.88e-09;3!CL:0002077;1.67e-07;34 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,8.59e-18,10;CL:0000541,8.59e-18,10;CL:0000710,5.39e-15,20;CL:0000133,5.45e-15,59;CL:0000075,2.18e-14,27;CL:0002322,9.99e-13,5;CL:0000147,3.55e-12,14;CL:0000221,2.81e-11,72;CL:0000333,1.87e-10,41;CL:0000128,2.08e-09,7;CL:0000126,2.08e-09,7;CL:0000127,2.08e-09,7;CL:0002453,2.08e-09,7;CL:0002605,3.69e-09,3;CL:0000064,9.78e-09,3;CL:0000067,9.78e-09,3;CL:0005012,9.78e-09,3;CL:0002304,9.78e-09,3;CL:0002319,1.05e-08,25;CL:0002077,1.16e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000133;1.51e-09;59 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.00e-54!94;UBERON:0001016!2.00e-54!94;UBERON:0005743!1.74e-52!86;UBERON:0003056!7.29e-51!61;UBERON:0001017!1.20e-50!82;UBERON:0003075!8.05e-50!86;UBERON:0007284!8.05e-50!86;UBERON:0002346!1.22e-46!90;UBERON:0001049!1.07e-45!57;UBERON:0005068!1.07e-45!57;UBERON:0006241!1.07e-45!57;UBERON:0007135!1.07e-45!57;UBERON:0002616!1.66e-43!59;UBERON:0002780!2.16e-43!41;UBERON:0001890!2.16e-43!41;UBERON:0006240!2.16e-43!41;UBERON:0000955!4.21e-43!69;UBERON:0006238!4.21e-43!69;UBERON:0003080!4.86e-42!42;UBERON:0001893!4.52e-41!34;UBERON:0002020!1.64e-40!34;UBERON:0003528!1.64e-40!34;UBERON:0002791!9.37e-40!33;UBERON:0001869!1.02e-39!32;UBERON:0000033!1.77e-37!123;UBERON:0004121!5.29e-36!169;UBERON:0000153!8.42e-36!129;UBERON:0007811!8.42e-36!129;UBERON:0000924!1.46e-34!173;UBERON:0006601!1.46e-34!173;UBERON:0000956!5.39e-32!25;UBERON:0000203!5.39e-32!25;UBERON:0001950!3.24e-28!20;UBERON:0002619!1.34e-27!22;UBERON:0007023!8.22e-14!115;UBERON:0001871!1.46e-11!7;UBERON:0002420!6.32e-11!9;UBERON:0007245!6.32e-11!9;UBERON:0010009!6.32e-11!9;UBERON:0010011!6.32e-11!9;UBERON:0000454!6.32e-11!9;UBERON:0001456!6.82e-11!21;UBERON:0002104!9.20e-11!21;UBERON:0000019!1.95e-10!19;UBERON:0000047!1.95e-10!19;UBERON:0004088!1.95e-10!19;UBERON:0003072!1.95e-10!19;UBERON:0003071!1.95e-10!19;UBERON:0004128!1.95e-10!19;UBERON:0000475!3.38e-10!365;UBERON:0002308!6.44e-10!9;UBERON:0000125!6.44e-10!9;UBERON:0000970!1.01e-09!20;UBERON:0000200!2.36e-09!6;UBERON:0001032!6.75e-09!24;UBERON:0004456!6.75e-09!24;UBERON:0000119!9.06e-09!312;UBERON:0002200!9.85e-09!11;UBERON:0006876!9.85e-09!11;UBERON:0000064!9.98e-09!219;UBERON:0007625!1.08e-08!11;UBERON:0002203!1.37e-08!6;UBERON:0001768!1.37e-08!6;UBERON:0009663!1.88e-08!7;UBERON:0001801!3.61e-08!14;UBERON:0001872!5.42e-08!5;UBERON:0000020!5.72e-08!23;UBERON:0000483!7.45e-08!309;UBERON:0002021!7.70e-08!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;9.91e-55;32!UBERON:0000956;4.30e-54;25!UBERON:0000203;4.30e-54;25!UBERON:0002791;2.74e-51;32!UBERON:0001893;5.68e-50;34!UBERON:0001950;3.74e-47;20!UBERON:0003528;8.00e-47;34!UBERON:0002020;8.00e-47;34!UBERON:0002619;1.58e-46;22!UBERON:0002780;2.85e-36;41!UBERON:0001890;2.85e-36;41!UBERON:0000073;6.86e-24;53!UBERON:0002616;6.86e-24;53!UBERON:0000955;1.63e-19;68!UBERON:0001017;5.67e-18;75!UBERON:0001871;2.66e-16;6!UBERON:0001016;7.34e-15;83!UBERON:0000200;7.82e-15;6!UBERON:0001872;1.84e-12;5!UBERON:0002021;2.13e-12;5!UBERON:0002203;4.10e-10;6!UBERON:0001768;4.10e-10;6!UBERON:0002200;4.10e-10;6!UBERON:0000369;1.46e-09;4!UBERON:0002435;1.46e-09;4!UBERON:0000204;1.46e-09;4!UBERON:0002420;6.85e-09;9!UBERON:0007245;6.85e-09;9!UBERON:0010009;6.85e-09;9!UBERON:0010011;6.85e-09;9!UBERON:0000454;6.85e-09;9!UBERON:0001778;9.88e-09;3!UBERON:0001775;9.88e-09;3!UBERON:0001870;2.17e-08;3!UBERON:0000349;6.95e-08;5!UBERON:0001801;1.27e-07;14!UBERON:0005383;2.74e-07;3!UBERON:0005382;2.74e-07;3!UBERON:0006876;2.85e-07;11!UBERON:0000922;9.09e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.33e-60,32;UBERON:0001893,4.86e-56,34;UBERON:0002791,9.59e-56,32;UBERON:0000956,5.27e-54,25;UBERON:0000203,5.27e-54,25;UBERON:0003056,4.93e-53,61;UBERON:0003528,4.78e-52,34;UBERON:0002020,4.78e-52,34;UBERON:0002780,6.95e-52,41;UBERON:0001890,6.95e-52,41;UBERON:0003080,6.95e-52,41;UBERON:0006240,6.95e-52,41;UBERON:0001950,3.94e-47,20;UBERON:0002619,1.88e-46,22;UBERON:0001016,6.10e-46,89;UBERON:0003075,6.40e-46,82;UBERON:0007284,6.40e-46,82;UBERON:0001017,3.35e-45,81;UBERON:0000073,9.23e-44,53;UBERON:0002616,9.23e-44,53;UBERON:0001049,1.30e-43,56;UBERON:0005068,1.30e-43,56;UBERON:0006241,1.30e-43,56;UBERON:0007135,1.30e-43,56;UBERON:0002346,3.22e-43,86;UBERON:0000955,2.18e-40,68;UBERON:0006238,2.18e-40,68;UBERON:0010371,1.26e-33,104;UBERON:0004121,4.70e-28,171;UBERON:0000924,4.70e-28,171;UBERON:0006601,4.70e-28,171;UBERON:0010314,1.11e-26,132;UBERON:0001871,2.40e-16,6;UBERON:0000200,7.66e-15,6;UBERON:0011216,1.73e-13,223;UBERON:0001872,1.58e-12,5;UBERON:0002021,2.88e-12,5;UBERON:0007023,3.44e-10,114;UBERON:0002203,4.94e-10,6;UBERON:0001768,4.94e-10,6;UBERON:0002200,4.94e-10,6;UBERON:0000369,1.29e-09,4;UBERON:0002435,1.29e-09,4;UBERON:0000204,1.29e-09,4;UBERON:0010082,1.29e-09,4;UBERON:0002420,5.42e-09,9;UBERON:0007245,5.42e-09,9;UBERON:0010009,5.42e-09,9;UBERON:0010011,5.42e-09,9;UBERON:0000454,5.42e-09,9;UBERON:0001778,9.78e-09,3;UBERON:0001775,9.78e-09,3;UBERON:0001870,2.17e-08,3;UBERON:0000349,6.65e-08,5;UBERON:0001801,1.45e-07,14;UBERON:0001456,1.94e-07,22;UBERON:0005383,2.28e-07,3;UBERON:0005382,2.28e-07,3;UBERON:0006876,3.18e-07,11 | |||
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|short_description=p@chr12:130388744..130388782,- | |short_description=p@chr12:130388744..130388782,- | ||
}} | }} |
Latest revision as of 06:43, 24 July 2015
Short description: | p@chr12:130388744..130388782, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:130388744..130388782, - |
Coexpression cluster: | C3253_normal_pineal_insula_Mesothelial_Astrocyte_temporal_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 8.59e-18 | 10 |
melanoblast | 8.59e-18 | 10 |
neurecto-epithelial cell | 5.39e-15 | 20 |
neurectodermal cell | 5.45e-15 | 59 |
columnar/cuboidal epithelial cell | 2.18e-14 | 27 |
embryonic stem cell | 9.99e-13 | 5 |
pigment cell | 3.55e-12 | 14 |
ectodermal cell | 2.81e-11 | 72 |
migratory neural crest cell | 1.87e-10 | 41 |
oligodendrocyte | 2.08e-09 | 7 |
macroglial cell | 2.08e-09 | 7 |
astrocyte | 2.08e-09 | 7 |
oligodendrocyte precursor cell | 2.08e-09 | 7 |
astrocyte of the cerebral cortex | 3.69e-09 | 3 |
ciliated cell | 9.78e-09 | 3 |
ciliated epithelial cell | 9.78e-09 | 3 |
multi-ciliated epithelial cell | 9.78e-09 | 3 |
non-pigmented ciliary epithelial cell | 9.78e-09 | 3 |
neural cell | 1.05e-08 | 25 |
ecto-epithelial cell | 1.16e-07 | 34 |