FFCP PHASE1:Hg19::chr15:39888595..39888609,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr15:39888595..39888609,+ | |||
|coexpression_cluster_id=C453 | |||
|description=CAGE_peak_at_chr15:39888595..39888609,+ | |description=CAGE_peak_at_chr15:39888595..39888609,+ | ||
|id=chr15:39888595..39888609,+ | |id=chr15:39888595..39888609,+ | ||
|ontology_enrichment_celltype=CL:0002139!6.26e-13!24;CL:0000222!3.18e-11!119;CL:0000115!9.80e-11!35;CL:0000055!5.55e-10!180;CL:0000071!1.08e-09!18;CL:0002546!1.08e-09!18;CL:0000057!1.68e-09!75;CL:0002078!1.16e-08!44;CL:0000213!4.72e-08!57;CL:0000215!4.72e-08!57;CL:0002371!5.29e-07!591 | |ontology_enrichment_celltype=CL:0002139!6.26e-13!24;CL:0000222!3.18e-11!119;CL:0000115!9.80e-11!35;CL:0000055!5.55e-10!180;CL:0000071!1.08e-09!18;CL:0002546!1.08e-09!18;CL:0000057!1.68e-09!75;CL:0002078!1.16e-08!44;CL:0000213!4.72e-08!57;CL:0000215!4.72e-08!57;CL:0002371!5.29e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0002139;3.68e-18;24!CL:0000071;1.05e-14;18!CL:0000115;1.23e-12;36!CL:0002544;3.43e-11;6!CL:1000413;1.89e-09;9!CL:0002078;5.18e-08;45!CL:0002334;3.93e-07;12!CL:0002580;4.38e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.78e-19,24;CL:0000115,9.74e-16,36;CL:0000071,2.96e-15,18;CL:0002546,2.96e-15,18;CL:0002078,5.28e-13,45;CL:0002544,1.31e-11,6;CL:1000413,6.74e-10,9;CL:0000213,7.90e-09,58;CL:0000215,7.90e-09,58;CL:0000057,2.54e-08,76;CL:0000222,1.16e-07,121;CL:0002334,4.10e-07,12;CL:0002580,4.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.05e-14;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000055!6.83e-14!69;UBERON:0002049!3.25e-13!79;UBERON:0007798!3.25e-13!79;UBERON:0001981!1.59e-12!60;UBERON:0007500!1.59e-12!60;UBERON:0004537!1.59e-12!60;UBERON:0006965!1.59e-12!60;UBERON:0004872!1.24e-11!84;UBERON:0000487!1.87e-10!22;UBERON:0001986!1.08e-09!18;UBERON:0004638!1.08e-09!18;UBERON:0004852!1.08e-09!18;UBERON:0006914!3.28e-09!25;UBERON:0004535!3.97e-08!110;UBERON:0001637!4.22e-08!42;UBERON:0003509!4.22e-08!42;UBERON:0004572!4.22e-08!42;UBERON:0001009!8.38e-08!113;UBERON:0000947!2.40e-07!21;UBERON:0010191!2.40e-07!21;UBERON:0003914!2.57e-07!118;UBERON:0000490!8.02e-07!138 | |||
|ontology_enrichment_uberon_v019=UBERON:0000487;1.22e-15;22!UBERON:0004638;1.05e-14;18!UBERON:0001986;1.05e-14;18!UBERON:0004852;1.05e-14;18!UBERON:0006914;2.83e-13;25!UBERON:0000947;9.15e-12;21!UBERON:0010191;9.15e-12;21!UBERON:0000490;1.36e-09;33!UBERON:0003915;1.89e-09;9!UBERON:0004700;1.89e-09;9!UBERON:0001917;1.89e-09;9!UBERON:0000055;2.13e-09;65!UBERON:0007500;2.50e-09;56!UBERON:0001981;2.50e-09;56!UBERON:0004537;2.50e-09;56!UBERON:0001637;3.93e-08;42!UBERON:0003509;3.93e-08;42!UBERON:0004572;3.93e-08;42!UBERON:0004573;2.01e-07;33!UBERON:0004571;2.01e-07;33!UBERON:0003914;2.22e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000055,2.07e-17,68;UBERON:0000487,4.19e-16,22;UBERON:0007500,2.68e-15,59;UBERON:0001981,2.68e-15,59;UBERON:0004537,2.68e-15,59;UBERON:0006965,2.68e-15,59;UBERON:0004638,2.96e-15,18;UBERON:0001986,2.96e-15,18;UBERON:0004852,2.96e-15,18;UBERON:0002049,4.71e-14,78;UBERON:0007798,4.71e-14,78;UBERON:0006914,1.13e-13,25;UBERON:0004872,1.34e-13,83;UBERON:0000947,4.00e-12,21;UBERON:0010191,4.00e-12,21;UBERON:0003914,5.16e-11,117;UBERON:0004535,9.69e-11,109;UBERON:0001009,3.26e-10,112;UBERON:0003915,6.74e-10,9;UBERON:0004700,6.74e-10,9;UBERON:0001917,6.74e-10,9;UBERON:0001637,1.54e-09,42;UBERON:0003509,1.54e-09,42;UBERON:0004572,1.54e-09,42;UBERON:0004573,1.02e-07,33;UBERON:0004571,1.02e-07,33;UBERON:0010260,9.49e-07,9 | |||
|phase1_expression=3.45188920614058,1.92690471501885,0.986680828671798,2.00146596706261,0,2.61701557230111,7.59899634504932,0,0,0.491467873003018,0,0.655324116390517,0.791300934685361,0,0.331397375727916,2.01697543935533,0.602694528023977,1.46062018077475,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0.464448369948228,0,0,0.369754010166788,0,0,0,0,2.00544447470142,0.217010870715852,0.447830948479849,0,0,0.290796477559129,0.377875943688809,0,1.16214518452842,0.411167888021826,0,0.863077176966451,0,0.236482229888585,0.689491361473237,0,0,0.376484679085209,0,0.224723484445085,1.83650335422542,0.320929027076094,0,0,0,0,1.16083695451434,0,0,3.26623264833766,0,0,3.02699751316684,0.368277635987565,0,0,0,0.209658645508376,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02290049474824,0,1.00267582127178,1.01392563272577,0.795285947051099,1.94653948121054,0,0.443458794925128,0.087834785693126,0,0,0,0,0,0,0,0,0,1.98762407366705,1.72046919021225,3.47140501607594,3.39184765154406,0.838998872419812,0,1.8809546988313,0.516833518338658,0.35576626268671,1.67360306382335,0.402829317109147,3.04108842287405,2.4406205754817,2.57364156242108,2.43042584364528,1.51809538082936,1.79623498100936,3.15312145353302,1.53316637465883,0,0.549605231791222,0,0,0.872188104285069,12.424298792383,1.13967460498122,1.72131935057184,1.43418310374407,0,0,1.06748995729705,1.72667283892012,0,0.134710672069688,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.149448680551801,0,0,0,0.408308342509787,0,0.103325781175765,2.37600571456411,7.66527480763526,0,0,0.168336113954066,0.125118519871964,0,1.31693286264251,4.29082914118628,6.15976041517047,0.226864366320042,1.79389635688862,1.49490172172997,0.635795703478686,0.600182192168805,0.515262646192195,1.28820270022815,1.11670113798954,1.85653965465393,0.779496041289589,0.504867548488229,1.28869858099219,0.161646056818812,0.710019185033229,0.503760491138201,0.169560592310488,0.193260853163297,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,3.21620469096443,0,0.464367928031979,1.44375896333917,0.118306800039844,0,0,0.110293972732394,0.217879444092406,0.237270619111097,0.269662616320329,0,0,0,1.40241773803446,0,0,0,0,0,0,0,0,0.548751427043128,0,0.301586917234893,0.0925884451585296,0,0,0,0,0,1.44366447761074,2.77791307545966,2.85381228351897,0,0.858486162094873,0,0,0,0,0.839910640994298,0.567100388969546,1.07470227243418,1.45316969256981,0.383382679165211,0,0,0,0,0,0,0,0,0,0.205654985406647,0,0,0,0,0.07333828582095,0.129271715757778,0,0,0.797814349754612,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0.239624855491583,0,0,0.579125226670317,1.02738161275192,0.716243852959582,0.112085143993527,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,3.53550464602372,4.10386674233472,3.94256037584837,6.2084949946138,0.902838299183157,2.27407504055985,0,1.32845119707087,0.737476674166813,0.521301686808497,0,0,0,0,0.213455115606889,0.606255142892519,0,0.30239029332968,3.47350930946288,11.2027240500286,2.24528075546459,1.53766979106841,2.55853624533352,3.53878626515936,0,0.771048469013278,1.06537035187876,0.164254312027618,0.519254429183621,0.348631135379878,0,0.40101294060657,0,0.114814448164607,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.340187410553031,2.15915916102139,1.54227252690289,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0.183138929636687,0,0,0.650060246036521,4.82051789532479,0,0,0,0.275673144969061,0,0.145016693914229,0,0.178064071293475,0.330569830721956,2.11409074101617,1.02090169995667,0.50578890427775,0,0.94443704049192,0.6970372701606,0,0,2.60979897622522,0.37064843820784,0.572499546967965,0,0.316379424718726,0.190630193923825,0.255897791311334,0.42793898803392,0,0,0.899362287916574,0.274537029736055,0.471249609382746,0.202182481573316,1.58510321173008,0.421258456238981,0,0.487426979262569,0,0.136499911407986,0.707027159768564,0,0,0,0,0,0,0.608731130888112,2.16876448669825,1.40847801266121,0.143411352204052,0.196498082026242,1.426684205925,0.354761064070598,0.422215270595328,0,0,0.349934720244983,0.673554789078584,0,0,0.0941438007767792,1.29151611801369,0,1.33029046061003,1.1486170010348,0,0,0,0,0,0,0,0,0.106824071127473,3.84991942105343,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.62618933211459,2.07875276582847,7.6790175524808,0,0.140669416410513,0,0,0,0,0.552567831062295,0,0.102268682502155,0,1.24415835064723,3.23526064130377,0,0,0.493217028184668,0,3.33410970433911,0,0,0,0.260427761085233,0.0874599999961957,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.153900517007594,0.797594390929008,0,0,0,0.31900115973192,2.01514705484097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0.394584402849391,0,0.61214552326098,0.63186579628488,0,0,0,0,0,0,0.284609546029793,0.277349346026277,0,0.195984794828755,0.174118413160805,0,0,0,0,0,0.193978032976839,0,0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| ||
|short_description=p@chr15:39888595..39888609,+ | |short_description=p@chr15:39888595..39888609,+ | ||
}} | }} |
Latest revision as of 01:22, 25 July 2015
Short description: | p@chr15:39888595..39888609, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr15:39888595..39888609, + |
Coexpression cluster: | C453_hepatic_Ewing_neurofibroma_spindle_tridermal_Olfactory_bone |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.78e-19 | 24 |
endothelial cell | 9.74e-16 | 36 |
blood vessel endothelial cell | 2.96e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.96e-15 | 18 |
meso-epithelial cell | 5.28e-13 | 45 |
aortic endothelial cell | 1.31e-11 | 6 |
endothelial cell of artery | 6.74e-10 | 9 |
lining cell | 7.90e-09 | 58 |
barrier cell | 7.90e-09 | 58 |
fibroblast | 2.54e-08 | 76 |
mesodermal cell | 1.16e-07 | 121 |
preadipocyte | 4.10e-07 | 12 |
preadipocyte of the breast | 4.39e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
vessel | 2.07e-17 | 68 |
simple squamous epithelium | 4.19e-16 | 22 |
epithelial tube open at both ends | 2.68e-15 | 59 |
blood vessel | 2.68e-15 | 59 |
blood vasculature | 2.68e-15 | 59 |
vascular cord | 2.68e-15 | 59 |
blood vessel endothelium | 2.96e-15 | 18 |
endothelium | 2.96e-15 | 18 |
cardiovascular system endothelium | 2.96e-15 | 18 |
vasculature | 4.71e-14 | 78 |
vascular system | 4.71e-14 | 78 |
squamous epithelium | 1.13e-13 | 25 |
splanchnic layer of lateral plate mesoderm | 1.34e-13 | 83 |
aorta | 4.00e-12 | 21 |
aortic system | 4.00e-12 | 21 |
epithelial tube | 5.16e-11 | 117 |
cardiovascular system | 9.69e-11 | 109 |
circulatory system | 3.26e-10 | 112 |
endothelial tube | 6.74e-10 | 9 |
arterial system endothelium | 6.74e-10 | 9 |
endothelium of artery | 6.74e-10 | 9 |
artery | 1.54e-09 | 42 |
arterial blood vessel | 1.54e-09 | 42 |
arterial system | 1.54e-09 | 42 |
systemic artery | 1.02e-07 | 33 |
systemic arterial system | 1.02e-07 | 33 |
umbilical blood vessel | 9.49e-07 | 9 |