FFCP PHASE1:Hg19::chr17:38612787..38612806,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:38612787..38612806,+
|short_description=p@chr17:38612787..38612806,+
|description=CAGE_peak_at_chr17:38612787..38612806,+
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:38612787..38612806,+ | |||
|coexpression_cluster_id=C353 | |||
|description=CAGE_peak_at_chr17:38612787..38612806,+ | |||
|id=chr17:38612787..38612806,+ | |||
|ontology_enrichment_celltype=CL:0000055!5.75e-25!180;CL:0000057!1.74e-17!75;CL:0000183!8.31e-15!59;CL:0000680!1.10e-13!57;CL:0000056!1.10e-13!57;CL:0000355!1.10e-13!57;CL:0000222!3.28e-13!119;CL:0000187!1.69e-12!54;CL:0000192!3.05e-11!42;CL:0000514!3.05e-11!42;CL:0000393!3.61e-11!60;CL:0000211!3.61e-11!60;CL:0002371!6.24e-08!591;CL:0000499!2.73e-07!27;CL:0000359!3.23e-07!32;CL:0000048!6.45e-07!430;CL:0000327!8.01e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000499;1.75e-10;28!CL:0000327;4.06e-09;15!CL:0000134;3.25e-08;55!CL:0000723;1.37e-07;61!CL:0002320;2.96e-07;188!CL:0000048;3.76e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,1.69e-16,427;CL:0000723,9.97e-16,433;CL:0000034,9.69e-15,441;CL:0000057,1.12e-12,76;CL:0000680,3.64e-11,58;CL:0000056,3.64e-11,58;CL:0000355,3.64e-11,58;CL:0000499,1.96e-10,28;CL:0000187,2.62e-10,55;CL:0002320,2.65e-10,361;CL:0000327,5.14e-09,15;CL:0000192,1.13e-08,43;CL:0000514,1.13e-08,43;CL:0000393,1.93e-08,61;CL:0000211,1.93e-08,61;CL:0000134,1.22e-07,354;CL:0000136,4.42e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!4.81e-22!143;UBERON:0002100!1.26e-20!216;UBERON:0000914!2.94e-14!83;UBERON:0002329!2.94e-14!83;UBERON:0003077!2.94e-14!83;UBERON:0003059!2.94e-14!83;UBERON:0007282!2.94e-14!83;UBERON:0009618!2.94e-14!83;UBERON:0007285!2.94e-14!83;UBERON:0003914!1.20e-13!118;UBERON:0003104!2.34e-13!238;UBERON:0009142!2.34e-13!238;UBERON:0001134!8.55e-13!61;UBERON:0002036!8.55e-13!61;UBERON:0003082!8.55e-13!61;UBERON:0002385!1.22e-12!63;UBERON:0001015!1.22e-12!63;UBERON:0000383!1.22e-12!63;UBERON:0004290!2.60e-12!70;UBERON:0000490!6.06e-12!138;UBERON:0000486!7.75e-12!82;UBERON:0002049!5.66e-11!79;UBERON:0007798!5.66e-11!79;UBERON:0000475!6.28e-11!365;UBERON:0000481!1.91e-09!347;UBERON:0009569!3.33e-09!113;UBERON:0004872!4.31e-09!84;UBERON:0000926!6.94e-09!448;UBERON:0004120!6.94e-09!448;UBERON:0006603!6.94e-09!448;UBERON:0001009!8.86e-09!113;UBERON:0000468!9.57e-09!659;UBERON:0004535!1.53e-08!110;UBERON:0000055!1.11e-07!69;UBERON:0000477!1.31e-07!286;UBERON:0002417!1.65e-07!61;UBERON:0000916!1.65e-07!61;UBERON:0001981!8.88e-07!60;UBERON:0007500!8.88e-07!60;UBERON:0004537!8.88e-07!60;UBERON:0006965!8.88e-07!60 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;6.12e-09;9!UBERON:0000042;6.12e-09;9!UBERON:0004905;2.88e-08;8!UBERON:0000982;2.88e-08;8!UBERON:0004770;2.88e-08;8!UBERON:0003688;5.91e-08;6!UBERON:0002358;5.91e-08;6!UBERON:0003684;5.91e-08;6!UBERON:0001178;5.91e-08;6!UBERON:0002384;7.07e-08;198!UBERON:0011135;2.52e-07;5!UBERON:0002216;2.52e-07;5!UBERON:0011134;2.52e-07;5!UBERON:0002209;2.52e-07;5!UBERON:0002213;2.52e-07;5!UBERON:0007844;2.52e-07;5!UBERON:0011138;2.52e-07;5!UBERON:0001130;2.52e-07;5!UBERON:0001066;2.52e-07;5!UBERON:0001468;2.52e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,8.95e-14,160;UBERON:0009142,8.95e-14,160;UBERON:0005256,1.63e-12,122;UBERON:0007503,1.85e-11,78;UBERON:0002384,1.33e-10,371;UBERON:0007524,7.85e-10,73;UBERON:0001134,7.88e-10,62;UBERON:0002036,7.88e-10,62;UBERON:0003082,7.88e-10,62;UBERON:0002329,1.93e-09,71;UBERON:0003059,1.93e-09,71;UBERON:0007282,1.93e-09,71;UBERON:0004290,1.93e-09,71;UBERON:0009618,1.93e-09,71;UBERON:0002385,3.11e-09,64;UBERON:0001015,3.11e-09,64;UBERON:0000383,3.11e-09,64;UBERON:0003077,3.57e-09,72;UBERON:0007285,3.57e-09,72;UBERON:0002100,6.51e-09,199;UBERON:0004905,2.87e-08,8;UBERON:0000982,2.87e-08,8;UBERON:0004770,2.87e-08,8;UBERON:0000486,3.20e-08,83;UBERON:0003688,7.15e-08,6;UBERON:0002358,7.15e-08,6;UBERON:0003684,7.15e-08,6;UBERON:0001178,7.15e-08,6;UBERON:0011135,2.51e-07,5;UBERON:0002216,2.51e-07,5;UBERON:0011134,2.51e-07,5;UBERON:0002209,2.51e-07,5;UBERON:0002213,2.51e-07,5;UBERON:0005856,2.51e-07,5;UBERON:0005866,2.51e-07,5;UBERON:0005863,2.51e-07,5;UBERON:0007844,2.51e-07,5;UBERON:0011138,2.51e-07,5;UBERON:0001130,2.51e-07,5;UBERON:0001066,2.51e-07,5;UBERON:0001468,2.51e-07,5 | |||
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| ||
|short_description=p@chr17:38612787..38612806,+ | |||
}} | }} |
Latest revision as of 16:27, 25 July 2015
Short description: | p@chr17:38612787..38612806, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:38612787..38612806, + |
Coexpression cluster: | C353_tenocyte_Nucleus_Chondrocyte_Anulus_Fibroblast_Synoviocyte_tridermal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 1.69e-16 | 427 |
somatic stem cell | 9.97e-16 | 433 |
stem cell | 9.69e-15 | 441 |
fibroblast | 1.12e-12 | 76 |
muscle precursor cell | 3.64e-11 | 58 |
myoblast | 3.64e-11 | 58 |
multi-potent skeletal muscle stem cell | 3.64e-11 | 58 |
stromal cell | 1.96e-10 | 28 |
muscle cell | 2.62e-10 | 55 |
connective tissue cell | 2.65e-10 | 361 |
extracellular matrix secreting cell | 5.14e-09 | 15 |
smooth muscle cell | 1.13e-08 | 43 |
smooth muscle myoblast | 1.13e-08 | 43 |
electrically responsive cell | 1.93e-08 | 61 |
electrically active cell | 1.93e-08 | 61 |
mesenchymal cell | 1.22e-07 | 354 |
fat cell | 4.42e-07 | 15 |