FFCP PHASE1:Hg19::chr17:46627545..46627560,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:46627545..46627560,+ | |||
|description=CAGE_peak_at_chr17:46627545..46627560,+ | |description=CAGE_peak_at_chr17:46627545..46627560,+ | ||
|id=chr17:46627545..46627560,+ | |id=chr17:46627545..46627560,+ | ||
|ontology_enrichment_celltype=CL:0000183!9.31e-17!59;CL:0000055!8.87e-14!180;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000187!1.17e-13!54;CL:0002539!1.65e-13!10;CL:1000507!6.64e-13!12;CL:1000494!6.64e-13!12;CL:0000192!1.66e-12!42;CL:0000514!1.66e-12!42;CL:0000393!1.54e-11!60;CL:0000211!1.54e-11!60;CL:1000449!4.56e-11!16;CL:0002551!1.94e-10!6;CL:1000497!1.63e-09!18;CL:0002518!1.63e-09!18;CL:0000222!1.77e-09!119;CL:0002371!2.58e-08!591;CL:0000144!2.79e-08!625;CL:0000057!1.52e-07!75;CL:0002681!1.69e-07!13;CL:0002584!1.69e-07!13;CL:0000359!4.62e-07!32;CL:0002334!5.80e-07!12 | |ontology_enrichment_celltype=CL:0000183!9.31e-17!59;CL:0000055!8.87e-14!180;CL:0000680!1.15e-13!57;CL:0000056!1.15e-13!57;CL:0000355!1.15e-13!57;CL:0000187!1.17e-13!54;CL:0002539!1.65e-13!10;CL:1000507!6.64e-13!12;CL:1000494!6.64e-13!12;CL:0000192!1.66e-12!42;CL:0000514!1.66e-12!42;CL:0000393!1.54e-11!60;CL:0000211!1.54e-11!60;CL:1000449!4.56e-11!16;CL:0002551!1.94e-10!6;CL:1000497!1.63e-09!18;CL:0002518!1.63e-09!18;CL:0000222!1.77e-09!119;CL:0002371!2.58e-08!591;CL:0000144!2.79e-08!625;CL:0000057!1.52e-07!75;CL:0002681!1.69e-07!13;CL:0002584!1.69e-07!13;CL:0000359!4.62e-07!32;CL:0002334!5.80e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;1.11e-18;10!CL:1000494;1.11e-18;10!CL:0002539;1.54e-15;10!CL:1000449;3.68e-15;15!CL:0002551;2.63e-13;6!CL:1000497;3.58e-13;17!CL:0002518;3.58e-13;17!CL:0002559;4.44e-11;5!CL:0000632;7.79e-10;3!CL:0000192;1.17e-09;43!CL:0002504;1.97e-09;3!CL:1000279;1.97e-09;3!CL:1000280;1.97e-09;3!CL:0002681;5.27e-09;12!CL:0002584;5.27e-09;12!CL:0000187;3.13e-08;55!CL:0002554;4.63e-08;2!CL:0002561;7.86e-08;2!CL:0002600;2.21e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,1.11e-18,10;CL:1000494,1.11e-18,10;CL:0002539,1.19e-15,10;CL:1000449,3.92e-15,15;CL:0000192,2.78e-13,43;CL:0000514,2.78e-13,43;CL:1000497,3.79e-13,17;CL:0002518,3.79e-13,17;CL:0002551,3.88e-13,6;CL:0002559,4.34e-11,5;CL:0000187,5.81e-11,55;CL:0000680,3.38e-10,58;CL:0000056,3.38e-10,58;CL:0000355,3.38e-10,58;CL:0000632,7.57e-10,3;CL:0000222,8.68e-10,121;CL:0000393,1.65e-09,61;CL:0000211,1.65e-09,61;CL:0002504,1.88e-09,3;CL:1000279,1.88e-09,3;CL:1000280,1.88e-09,3;CL:0002681,5.21e-09,12;CL:0002584,5.21e-09,12;CL:0002554,4.63e-08,2;CL:0002561,8.69e-08,2;CL:0002600,2.36e-07,2;CL:0002195,7.90e-07,2;CL:0002571,7.90e-07,2;CL:0002602,7.90e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.17e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!3.16e-22!143;UBERON:0004290!1.32e-19!70;UBERON:0000914!3.16e-17!83;UBERON:0002329!3.16e-17!83;UBERON:0003077!3.16e-17!83;UBERON:0003059!3.16e-17!83;UBERON:0007282!3.16e-17!83;UBERON:0009618!3.16e-17!83;UBERON:0007285!3.16e-17!83;UBERON:0002100!2.29e-16!216;UBERON:0000486!3.62e-15!82;UBERON:0001135!7.37e-15!15;UBERON:0003104!9.84e-14!238;UBERON:0009142!9.84e-14!238;UBERON:0004237!1.65e-13!10;UBERON:0004695!1.65e-13!10;UBERON:0002111!1.65e-13!10;UBERON:0004178!1.65e-13!10;UBERON:0009773!6.64e-13!12;UBERON:0001231!6.64e-13!12;UBERON:0004810!6.64e-13!12;UBERON:0001134!2.96e-12!61;UBERON:0002036!2.96e-12!61;UBERON:0003082!2.96e-12!61;UBERON:0002067!5.70e-12!9;UBERON:0004016!5.70e-12!9;UBERON:0010083!5.70e-12!9;UBERON:0002385!1.27e-11!63;UBERON:0001015!1.27e-11!63;UBERON:0000383!1.27e-11!63;UBERON:0000080!2.97e-11!18;UBERON:0002120!2.97e-11!18;UBERON:0004875!2.97e-11!18;UBERON:0005721!2.97e-11!18;UBERON:0005754!2.97e-11!18;UBERON:0007297!2.97e-11!18;UBERON:0004211!4.56e-11!16;UBERON:0001285!4.56e-11!16;UBERON:0007684!4.56e-11!16;UBERON:0003220!4.56e-11!16;UBERON:0004208!4.56e-11!16;UBERON:0003887!1.14e-10!21;UBERON:0006555!3.03e-10!17;UBERON:0005103!3.03e-10!17;UBERON:0000083!3.03e-10!17;UBERON:0009201!3.03e-10!17;UBERON:0004819!3.03e-10!17;UBERON:0006553!3.03e-10!17;UBERON:0003074!3.03e-10!17;UBERON:0003060!3.03e-10!17;UBERON:0004876!8.31e-10!20;UBERON:0000058!3.34e-09!26;UBERON:0000475!4.29e-09!365;UBERON:0000481!4.82e-09!347;UBERON:0000353!1.18e-08!17;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0001225!1.69e-07!13;UBERON:0008987!1.69e-07!13;UBERON:0002417!3.39e-07!61;UBERON:0000916!3.39e-07!61;UBERON:0000490!4.26e-07!138;UBERON:0003914!5.53e-07!118;UBERON:0005172!6.39e-07!55;UBERON:0005173!6.39e-07!55 | |ontology_enrichment_uberon=UBERON:0005256!3.16e-22!143;UBERON:0004290!1.32e-19!70;UBERON:0000914!3.16e-17!83;UBERON:0002329!3.16e-17!83;UBERON:0003077!3.16e-17!83;UBERON:0003059!3.16e-17!83;UBERON:0007282!3.16e-17!83;UBERON:0009618!3.16e-17!83;UBERON:0007285!3.16e-17!83;UBERON:0002100!2.29e-16!216;UBERON:0000486!3.62e-15!82;UBERON:0001135!7.37e-15!15;UBERON:0003104!9.84e-14!238;UBERON:0009142!9.84e-14!238;UBERON:0004237!1.65e-13!10;UBERON:0004695!1.65e-13!10;UBERON:0002111!1.65e-13!10;UBERON:0004178!1.65e-13!10;UBERON:0009773!6.64e-13!12;UBERON:0001231!6.64e-13!12;UBERON:0004810!6.64e-13!12;UBERON:0001134!2.96e-12!61;UBERON:0002036!2.96e-12!61;UBERON:0003082!2.96e-12!61;UBERON:0002067!5.70e-12!9;UBERON:0004016!5.70e-12!9;UBERON:0010083!5.70e-12!9;UBERON:0002385!1.27e-11!63;UBERON:0001015!1.27e-11!63;UBERON:0000383!1.27e-11!63;UBERON:0000080!2.97e-11!18;UBERON:0002120!2.97e-11!18;UBERON:0004875!2.97e-11!18;UBERON:0005721!2.97e-11!18;UBERON:0005754!2.97e-11!18;UBERON:0007297!2.97e-11!18;UBERON:0004211!4.56e-11!16;UBERON:0001285!4.56e-11!16;UBERON:0007684!4.56e-11!16;UBERON:0003220!4.56e-11!16;UBERON:0004208!4.56e-11!16;UBERON:0003887!1.14e-10!21;UBERON:0006555!3.03e-10!17;UBERON:0005103!3.03e-10!17;UBERON:0000083!3.03e-10!17;UBERON:0009201!3.03e-10!17;UBERON:0004819!3.03e-10!17;UBERON:0006553!3.03e-10!17;UBERON:0003074!3.03e-10!17;UBERON:0003060!3.03e-10!17;UBERON:0004876!8.31e-10!20;UBERON:0000058!3.34e-09!26;UBERON:0000475!4.29e-09!365;UBERON:0000481!4.82e-09!347;UBERON:0000353!1.18e-08!17;UBERON:0002113!1.67e-07!27;UBERON:0003918!1.67e-07!27;UBERON:0005095!1.67e-07!27;UBERON:0007687!1.67e-07!27;UBERON:0001225!1.69e-07!13;UBERON:0008987!1.69e-07!13;UBERON:0002417!3.39e-07!61;UBERON:0000916!3.39e-07!61;UBERON:0000490!4.26e-07!138;UBERON:0003914!5.53e-07!118;UBERON:0005172!6.39e-07!55;UBERON:0005173!6.39e-07!55 | ||
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| ||
|short_description=p@chr17:46627545..46627560,+ | |short_description=p@chr17:46627545..46627560,+ | ||
}} | }} |
Latest revision as of 18:07, 25 July 2015
Short description: | p@chr17:46627545..46627560, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:46627545..46627560, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 1.11e-18 | 10 |
nephron tubule epithelial cell | 1.11e-18 | 10 |
aortic smooth muscle cell | 1.19e-15 | 10 |
epithelial cell of nephron | 3.92e-15 | 15 |
smooth muscle cell | 2.78e-13 | 43 |
smooth muscle myoblast | 2.78e-13 | 43 |
kidney cell | 3.79e-13 | 17 |
kidney epithelial cell | 3.79e-13 | 17 |
fibroblast of dermis | 3.88e-13 | 6 |
hair follicle cell | 4.34e-11 | 5 |
muscle cell | 5.81e-11 | 55 |
muscle precursor cell | 3.38e-10 | 58 |
myoblast | 3.38e-10 | 58 |
multi-potent skeletal muscle stem cell | 3.38e-10 | 58 |
hepatic stellate cell | 7.57e-10 | 3 |
mesodermal cell | 8.68e-10 | 121 |
electrically responsive cell | 1.65e-09 | 61 |
electrically active cell | 1.65e-09 | 61 |
enteric smooth muscle cell | 1.88e-09 | 3 |
smooth muscle cell of large intestine | 1.88e-09 | 3 |
smooth muscle cell of colon | 1.88e-09 | 3 |
kidney cortical cell | 5.21e-09 | 12 |
renal cortical epithelial cell | 5.21e-09 | 12 |
fibroblast of lymphatic vessel | 4.63e-08 | 2 |
outer root sheath cell | 8.69e-08 | 2 |
smooth muscle cell of trachea | 2.36e-07 | 2 |
hepatic stem cell | 7.90e-07 | 2 |
hepatic mesenchymal stem cell | 7.90e-07 | 2 |
annulus pulposus cell | 7.90e-07 | 2 |