FFCP PHASE1:Hg19::chr17:8868385..8868412,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:8868385..8868412,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr17:8868385..8868412,+ | |description=CAGE_peak_at_chr17:8868385..8868412,+ | ||
|id=chr17:8868385..8868412,+ | |id=chr17:8868385..8868412,+ | ||
|ontology_enrichment_celltype=CL:0000738!2.85e-71!140;CL:0000766!1.64e-60!76;CL:0000037!6.79e-60!172;CL:0000566!6.79e-60!172;CL:0000988!5.00e-58!182;CL:0002031!8.87e-56!124;CL:0002032!7.64e-55!165;CL:0000837!7.64e-55!165;CL:0000557!4.17e-54!71;CL:0002087!1.14e-53!119;CL:0002009!2.42e-51!65;CL:0000839!1.65e-50!70;CL:0002194!4.27e-49!63;CL:0000576!4.27e-49!63;CL:0000040!4.27e-49!63;CL:0000559!4.27e-49!63;CL:0002057!6.03e-49!42;CL:0000763!1.51e-47!112;CL:0000049!1.51e-47!112;CL:0000860!1.86e-44!45;CL:0000134!1.06e-12!358;CL:0002320!7.50e-12!365;CL:0002393!4.01e-11!9;CL:0002397!4.01e-11!9;CL:0000451!5.44e-11!10;CL:0000094!1.41e-10!8;CL:0000990!3.14e-09!8;CL:0000219!5.87e-09!390;CL:0000081!1.08e-08!11;CL:0000838!3.14e-08!52;CL:0000542!6.24e-08!53;CL:0000051!6.24e-08!53;CL:0000840!6.03e-07!5;CL:0001029!6.03e-07!5 | |ontology_enrichment_celltype=CL:0000738!2.85e-71!140;CL:0000766!1.64e-60!76;CL:0000037!6.79e-60!172;CL:0000566!6.79e-60!172;CL:0000988!5.00e-58!182;CL:0002031!8.87e-56!124;CL:0002032!7.64e-55!165;CL:0000837!7.64e-55!165;CL:0000557!4.17e-54!71;CL:0002087!1.14e-53!119;CL:0002009!2.42e-51!65;CL:0000839!1.65e-50!70;CL:0002194!4.27e-49!63;CL:0000576!4.27e-49!63;CL:0000040!4.27e-49!63;CL:0000559!4.27e-49!63;CL:0002057!6.03e-49!42;CL:0000763!1.51e-47!112;CL:0000049!1.51e-47!112;CL:0000860!1.86e-44!45;CL:0000134!1.06e-12!358;CL:0002320!7.50e-12!365;CL:0002393!4.01e-11!9;CL:0002397!4.01e-11!9;CL:0000451!5.44e-11!10;CL:0000094!1.41e-10!8;CL:0000990!3.14e-09!8;CL:0000219!5.87e-09!390;CL:0000081!1.08e-08!11;CL:0000838!3.14e-08!52;CL:0000542!6.24e-08!53;CL:0000051!6.24e-08!53;CL:0000840!6.03e-07!5;CL:0001029!6.03e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.33e-54;33!CL:0002057;7.33e-54;33!CL:0000473;1.47e-51;39!CL:0000234;1.47e-51;39!CL:0000576;1.22e-46;48!CL:0000766;1.94e-40;69!CL:0002087;7.13e-22;104!CL:0000738;2.41e-21;136!CL:0000763;1.28e-19;100!CL:0000094;2.00e-15;8!CL:0000988;1.83e-14;177!CL:0000451;2.62e-13;10!CL:0000081;4.21e-13;11!CL:0002393;6.97e-12;6!CL:0002397;6.97e-12;6!CL:0000990;1.12e-10;8!CL:0000219;3.35e-10;193!CL:0000840;1.01e-09;5!CL:0000235;1.91e-09;6!CL:0000775;8.18e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.77e-101,136;CL:0000766,2.23e-99,72;CL:0000557,3.00e-89,67;CL:0002009,1.86e-87,61;CL:0002194,6.67e-84,59;CL:0000576,6.67e-84,59;CL:0000040,6.67e-84,59;CL:0000559,6.67e-84,59;CL:0000473,6.57e-83,48;CL:0000234,6.57e-83,48;CL:0000037,8.56e-83,168;CL:0000839,2.53e-81,66;CL:0000988,4.75e-79,177;CL:0002087,5.19e-78,115;CL:0002031,7.40e-78,120;CL:0002032,4.79e-75,161;CL:0000837,4.79e-75,161;CL:0000860,1.17e-74,42;CL:0002057,1.17e-74,42;CL:0000763,1.56e-72,108;CL:0000049,1.56e-72,108;CL:0000134,1.39e-26,354;CL:0002320,1.44e-25,361;CL:0000219,5.29e-22,386;CL:0000034,1.06e-17,441;CL:0000048,1.15e-17,427;CL:0000723,4.53e-17,433;CL:0002393,2.97e-16,9;CL:0002397,2.97e-16,9;CL:0000094,2.05e-15,8;CL:0000451,1.78e-13,10;CL:0000081,4.71e-13,11;CL:0000990,8.33e-11,8;CL:0000840,7.59e-10,5;CL:0001029,7.59e-10,5;CL:0000235,2.15e-09,6;CL:0000838,2.52e-07,52;CL:0000542,4.23e-07,53;CL:0000051,4.23e-07,53;CL:0000775,8.35e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;2.77e-53;42!CL:0000049;2.73e-19;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.73e-64!102;UBERON:0003061!5.73e-64!102;UBERON:0002193!8.75e-57!112;UBERON:0002371!4.99e-47!80;UBERON:0001474!4.71e-42!86;UBERON:0002405!1.52e-36!115;UBERON:0004765!2.80e-32!101;UBERON:0001434!2.80e-32!101;UBERON:0003081!1.62e-18!216;UBERON:0000178!1.90e-13!15;UBERON:0000179!1.90e-13!15;UBERON:0000463!1.90e-13!15;UBERON:0002204!1.09e-12!167;UBERON:0002384!3.69e-11!375;UBERON:0007023!2.38e-08!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.72e-13;15!UBERON:0000179;1.72e-13;15!UBERON:0000463;1.72e-13;15!UBERON:0002390;5.15e-10;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.43e-95,98;UBERON:0003061,9.43e-95,98;UBERON:0002193,6.30e-84,108;UBERON:0002371,4.02e-79,76;UBERON:0001474,5.80e-72,82;UBERON:0002405,7.08e-70,93;UBERON:0004765,6.77e-64,90;UBERON:0001434,1.27e-55,100;UBERON:0003081,3.03e-34,203;UBERON:0002204,7.17e-26,167;UBERON:0002384,5.70e-25,371;UBERON:0000926,1.52e-14,315;UBERON:0004120,1.52e-14,315;UBERON:0006603,1.52e-14,315;UBERON:0000178,2.18e-13,15;UBERON:0000179,2.18e-13,15;UBERON:0000463,2.18e-13,15 | |||
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| ||
|short_description=p@chr17:8868385..8868412,+ | |short_description=p@chr17:8868385..8868412,+ | ||
}} | }} |
Latest revision as of 23:27, 25 July 2015
Short description: | p@chr17:8868385..8868412, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:8868385..8868412, + |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.43e-95 | 98 |
blood island | 9.43e-95 | 98 |
hemolymphoid system | 6.30e-84 | 108 |
bone marrow | 4.02e-79 | 76 |
bone element | 5.80e-72 | 82 |
immune system | 7.08e-70 | 93 |
skeletal element | 6.77e-64 | 90 |
skeletal system | 1.27e-55 | 100 |
lateral plate mesoderm | 3.03e-34 | 203 |
musculoskeletal system | 7.17e-26 | 167 |
connective tissue | 5.70e-25 | 371 |
mesoderm | 1.52e-14 | 315 |
mesoderm-derived structure | 1.52e-14 | 315 |
presumptive mesoderm | 1.52e-14 | 315 |
blood | 2.18e-13 | 15 |
haemolymphatic fluid | 2.18e-13 | 15 |
organism substance | 2.18e-13 | 15 |