FFCP PHASE1:Hg19::chr18:43418864..43418874,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr18:43418864..43418874,-
|short_description=p@chr18:43418864..43418874,-
|description=CAGE_peak_at_chr18:43418864..43418874,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr18:43418864..43418874,- | |||
|coexpression_cluster_id=C467 | |||
|description=CAGE_peak_at_chr18:43418864..43418874,- | |||
|id=chr18:43418864..43418874,- | |||
|ontology_enrichment_celltype=CL:0002194!3.63e-24!63;CL:0000576!3.63e-24!63;CL:0000040!3.63e-24!63;CL:0000559!3.63e-24!63;CL:0002009!1.10e-23!65;CL:0000839!1.88e-22!70;CL:0000557!5.59e-22!71;CL:0000766!7.08e-19!76;CL:0002057!2.33e-18!42;CL:0000860!2.17e-17!45;CL:0000763!2.59e-13!112;CL:0000049!2.59e-13!112;CL:0002320!1.88e-11!365;CL:0000048!6.30e-11!430;CL:0000723!3.38e-10!436;CL:0000034!5.02e-10!444;CL:0000134!5.57e-10!358;CL:0002371!1.80e-08!591;CL:0002031!8.04e-08!124;CL:0000144!9.60e-08!625;CL:0002087!1.50e-07!119;CL:0000219!1.55e-07!390;CL:0000548!2.48e-07!679;CL:0000004!2.48e-07!679;CL:0000255!2.48e-07!679;CL:0000012!3.19e-07!682 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.33e-26;39!CL:0000234;2.33e-26;39!CL:0000235;8.18e-21;6!CL:0000860;5.49e-19;33!CL:0002057;5.49e-19;33!CL:0000576;2.40e-15;48!CL:0000766;2.98e-11;69!CL:0002619;7.64e-11;3!CL:0002363;4.15e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.20e-41,59;CL:0000576,2.20e-41,59;CL:0000040,2.20e-41,59;CL:0000559,2.20e-41,59;CL:0002009,8.80e-40,61;CL:0000839,3.39e-36,66;CL:0000557,1.53e-35,67;CL:0000473,6.27e-33,48;CL:0000234,6.27e-33,48;CL:0000766,1.52e-32,72;CL:0000235,8.75e-21,6;CL:0000763,1.15e-20,108;CL:0000049,1.15e-20,108;CL:0000860,4.92e-20,42;CL:0002057,4.92e-20,42;CL:0002087,1.67e-17,115;CL:0002031,1.86e-16,120;CL:0000738,1.23e-13,136;CL:0002032,2.59e-11,161;CL:0000837,2.59e-11,161;CL:0002619,3.29e-11,3;CL:0000037,1.57e-10,168;CL:0000988,1.61e-10,177;CL:0002320,3.08e-10,361;CL:0000134,2.89e-09,354;CL:0000048,1.27e-08,427;CL:0000723,2.44e-08,433;CL:0000034,5.68e-08,441;CL:0000219,1.66e-07,386;CL:0002363,5.21e-07,2;CL:0000008,5.21e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-14;42!CL:0000049;2.37e-08;108!CL:0000008;4.15e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.05e-21!80;UBERON:0002405!2.75e-20!115;UBERON:0001474!7.72e-20!86;UBERON:0004765!5.98e-19!101;UBERON:0001434!5.98e-19!101;UBERON:0002193!6.34e-18!112;UBERON:0002390!4.75e-17!102;UBERON:0003061!4.75e-17!102;UBERON:0002204!5.38e-14!167;UBERON:0002384!3.46e-11!375;UBERON:0000926!9.86e-09!448;UBERON:0004120!9.86e-09!448;UBERON:0006603!9.86e-09!448;UBERON:0003081!2.04e-08!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003566;4.15e-07;2!UBERON:0001777;4.15e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.99e-30,76;UBERON:0001474,9.28e-30,82;UBERON:0004765,2.70e-28,90;UBERON:0001434,1.20e-24,100;UBERON:0002390,1.40e-23,98;UBERON:0003061,1.40e-23,98;UBERON:0002405,1.85e-23,93;UBERON:0002193,1.16e-20,108;UBERON:0002204,1.36e-15,167;UBERON:0003081,4.56e-14,203;UBERON:0000926,2.96e-10,315;UBERON:0004120,2.96e-10,315;UBERON:0006603,2.96e-10,315;UBERON:0002384,1.18e-09,371;UBERON:0003566,5.21e-07,2;UBERON:0001777,5.21e-07,2 | |||
|phase1_expression=1.45342703416445,0.214100523890983,0.281908808191942,1.0007329835313,1.78784437770915,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0.618831764800233,0.662794751455832,1.34465029290355,1.20538905604795,0.730310090387373,0,0.246242116153576,0,0,0.572471974262113,0,0,0,0.0821005894499457,0,0,0,0.77408061658038,0.919421224478927,0,0,0,0,0,0,0,0.217010870715852,7.61312612415743,1.94336199611388,3.8636335145128,0.726991193897824,1.51150377475524,0.242584061187816,1.85943229524548,0.822335776043652,1.23882548358041,0.863077176966451,0.768482119587302,1.41889337933151,0.689491361473237,1.29096936716765,2.70852973188684,0.752969358170419,1.63743690034707,3.14612878223118,1.22433556948361,0,2.55734850319616,0.659702600373432,1.19678194572979,0.852449501065388,0.580418477257168,2.26954089876456,1.24564449799115,1.25624332628372,1.5644487552606,0.868755378820466,0.605399502633369,0.736555271975129,1.26584954976354,0.633765858935825,0.850417199860174,1.67726916406701,0.44931452458598,0.450530678524519,0,0.855038231223746,0.99458338599545,1.64397738388171,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.263384084775077,0,0,0,0.334372990781356,0,0,0,0.222820913770347,0.294605907474837,0.443067789167242,0,0.128091319725675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.722878304769133,1.00267582127178,0.434539556882471,0,0.486634870302636,0,0,0.087834785693126,0,0,0,1.62273696827342,2.26368658489047,1.06366368415092,0,0,0,0,0,0,0,0.419499436209906,0.550236083880135,0,0.258416759169329,0.35576626268671,0.33472061276467,0.402829317109147,0,0.24406205754817,0,0,0.446498641420399,0,0.225222960966644,0,0,0,0,0,0,0,0.25326102332916,0,0.573673241497627,1.06400514659507,0,0,0.24666754841716,0.311211035399766,0,0.163461903113459,0.454072282934794,0,0.234321431833797,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0.161872944368132,0,0.61246251376468,0.368502951935304,0.103325781175765,0,0.247266929278557,0.910161361938026,0,0.168336113954066,0,0,0,0,0.45071417671979,0,0,0.85422955527427,0.211931901159562,0,0.309157587715317,0,0.558350568994769,0.168776332241266,0.389748020644795,0,0,0.484938170456436,0,0.10075209822764,0.169560592310488,0.966304265816484,0.272746120590835,0,0.121973706129595,0,0.232387885739037,0,0.252320850875628,0,1.56449532329816,0,0,0.928735856063958,1.44375896333917,0.236613600079688,0.505754070234305,0,0.330881918197182,0,0.237270619111097,0,0.784885860501384,1.15424147083917,0,1.40241773803446,0.8231480226628,0,0,0,0,0,0.368965315629341,0.171567810298526,0,0,0,0.185176890317059,1.62904152655162,1.03993478527958,0,0,0.117408694235822,0.144366447761074,0.462985512576611,0,0,0,3.69325509131096,3.51006397708857,2.37809859661965,0.93733833986777,0.16798212819886,0.141775097242386,0,0.290633938513962,0,0.492663237895943,0.176096868026452,0,0.288239906833923,0,0.190493682876507,0.763976851116555,0,0,0.308482478109971,0,0,0,0,0.1466765716419,0.387815147273333,7.15312891703765,0,0.26593811658487,1.04007436911366,0.514414748524284,0,0,0.285955987316295,1.08524321078289,0,0,1.42156779497018,0,0.602878754119172,0,0,8.51366464488333,9.5428847372104,2.10833939483032,0.239624855491583,0,0,0.289562613335158,0,0,0.560425719967636,0,0,0,0,0,0,0,0,0,0,0,0.736148950314839,0.500170521059677,1.08506009479894,0,0.713715955188647,0.946214490203608,0.234282829985426,1.20378439891088,0,0,0,0.184369168541703,0.260650843404249,1.76221041716467,0,0,0.647142602455851,0,2.12189300012382,0,0,0.248107807818777,0,0.841980283299221,0.896974044789907,0,0.482561763430822,0,0.154209693802656,0,0.0821271560138091,0,0.232420756919918,0.725156697549733,0,0,0.803701137152247,0.728364672026868,0.524497659837696,0.451199612907412,0.15403067420883,0,1.46139224653261,0.211103257785751,0,0,0,0,0.541892875087706,0,0.254876273045038,0,0,0.219259876645935,0,0.512900250232778,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0.15350367472613,0,0.214840489736547,0.145016693914229,0.0852266274161009,0.0890320356467374,0,0.192190067365106,0,0,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0,0,0,0.571890581771475,0.767693373934002,0.42793898803392,0,0,0.359744915166629,0.274537029736055,0.589062011728432,0.202182481573316,0,0,0.975267478179181,0,1.05650146756755,0.272999822815972,0.282810863907425,0,0,0,0,1.15755106853338,0.655894752046633,0.405820753925408,0.92947049429925,0,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0,0.379473173765715,1.74967360122491,0.192444225451024,0,0,0.188287601553558,0.43050537267123,3.36942951335251,0,0.229723400206959,0,0,0,0.714695326373367,0.411362273086194,1.29694662238543,0,0.79312517629427,0.213648142254946,0.962479855263359,0,0,0,0,0,0.199579371432817,0.191505370132367,0.211673582723883,1.29848776109822,0,0,0,0,0.169291777801603,0,0,0.425846237690326,0.687010689511529,0,0.223676107892416,0.500547425135725,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0,0.222617410045812,0.8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| ||
|short_description=p@chr18:43418864..43418874,- | |||
}} | }} |
Latest revision as of 00:59, 26 July 2015
Short description: | p@chr18:43418864..43418874, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr18:43418864..43418874, - |
Coexpression cluster: | C467_CD14_Monocytederived_Mesenchymal_Macrophage_Dendritic_mucinous_liver |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.99e-30 | 76 |
bone element | 9.28e-30 | 82 |
skeletal element | 2.70e-28 | 90 |
skeletal system | 1.20e-24 | 100 |
hematopoietic system | 1.40e-23 | 98 |
blood island | 1.40e-23 | 98 |
immune system | 1.85e-23 | 93 |
hemolymphoid system | 1.16e-20 | 108 |
musculoskeletal system | 1.36e-15 | 167 |
lateral plate mesoderm | 4.56e-14 | 203 |
mesoderm | 2.96e-10 | 315 |
mesoderm-derived structure | 2.96e-10 | 315 |
presumptive mesoderm | 2.96e-10 | 315 |
connective tissue | 1.18e-09 | 371 |
head connective tissue | 5.21e-07 | 2 |
substantia propria of cornea | 5.21e-07 | 2 |