FFCP PHASE1:Hg19::chr19:10961109..10961114,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:10961109..10961114,+ | |||
|coexpression_cluster_id=C719 | |||
|description=CAGE_peak_at_chr19:10961109..10961114,+ | |||
|id=chr19:10961109..10961114,+ | |||
|ontology_enrichment_celltype=CL:0002057!8.42e-95!42;CL:0000860!9.30e-88!45;CL:0002194!1.86e-75!63;CL:0000576!1.86e-75!63;CL:0000040!1.86e-75!63;CL:0000559!1.86e-75!63;CL:0000766!5.31e-74!76;CL:0002009!8.18e-73!65;CL:0000839!7.43e-67!70;CL:0000557!9.19e-66!71;CL:0000763!2.35e-53!112;CL:0000049!2.35e-53!112;CL:0002087!9.47e-45!119;CL:0000738!4.91e-44!140;CL:0000037!2.41e-38!172;CL:0000566!2.41e-38!172;CL:0002032!4.67e-37!165;CL:0000837!4.67e-37!165;CL:0002031!1.27e-36!124;CL:0000988!1.67e-35!182;CL:0002393!2.09e-21!9;CL:0002397!2.09e-21!9;CL:0000134!1.61e-11!358;CL:0002320!4.73e-11!365;CL:0000875!1.84e-10!3;CL:0002396!1.84e-10!3;CL:0000219!4.84e-10!390;CL:0000767!4.50e-09!3;CL:0000048!4.85e-08!430;CL:0000723!9.38e-08!436;CL:0000034!2.19e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.38e-45;33!CL:0002057;6.38e-45;33!CL:0000576;1.29e-44;48!CL:0000473;2.06e-31;39!CL:0000234;2.06e-31;39!CL:0000875;3.71e-27;3!CL:0002396;3.71e-27;3!CL:0000766;2.40e-25;69!CL:0002393;2.21e-23;6!CL:0002397;2.21e-23;6!CL:0002087;2.75e-15;104!CL:0000763;5.34e-15;100!CL:0000738;9.65e-11;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.82e-87,42;CL:0002057,2.82e-87,42;CL:0000473,5.27e-76,48;CL:0000234,5.27e-76,48;CL:0002194,3.24e-60,59;CL:0000576,3.24e-60,59;CL:0000040,3.24e-60,59;CL:0000559,3.24e-60,59;CL:0002009,3.54e-58,61;CL:0000766,3.92e-54,72;CL:0000839,1.30e-53,66;CL:0000557,8.84e-53,67;CL:0002393,3.78e-47,9;CL:0002397,3.78e-47,9;CL:0000763,3.09e-35,108;CL:0000049,3.09e-35,108;CL:0002087,1.14e-29,115;CL:0002031,2.60e-28,120;CL:0000875,2.09e-27,3;CL:0002396,2.09e-27,3;CL:0000738,2.19e-27,136;CL:0002032,1.16e-22,161;CL:0000837,1.16e-22,161;CL:0000037,1.37e-21,168;CL:0000988,2.48e-20,177;CL:0000134,1.75e-08,354;CL:0002320,3.00e-08,361;CL:0000219,1.99e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.57e-57;42!CL:0000049;9.10e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.78e-57!80;UBERON:0002390!4.47e-57!102;UBERON:0003061!4.47e-57!102;UBERON:0002193!2.67e-53!112;UBERON:0001474!2.13e-52!86;UBERON:0004765!5.67e-43!101;UBERON:0001434!5.67e-43!101;UBERON:0002405!2.66e-40!115;UBERON:0002204!6.34e-23!167;UBERON:0003081!1.24e-21!216;UBERON:0002384!2.06e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.94e-46,76;UBERON:0001474,1.08e-42,82;UBERON:0002390,4.21e-39,98;UBERON:0003061,4.21e-39,98;UBERON:0004765,1.13e-38,90;UBERON:0002405,2.44e-37,93;UBERON:0002193,3.15e-35,108;UBERON:0001434,1.54e-34,100;UBERON:0002204,1.70e-19,167;UBERON:0003081,2.58e-17,203;UBERON:0000926,5.78e-10,315;UBERON:0004120,5.78e-10,315;UBERON:0006603,5.78e-10,315;UBERON:0002384,6.24e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.80490002723128,0.434021741431704,0.223915474239924,0,0,1.45398238779565,0.755751887377619,0.242584061187816,0.464858073811369,0,0.309706370895104,0.575384784644301,1.7931249457037,1.89185783910868,0.344745680736619,1.29096936716765,0,0.941211697713023,0.545812300115692,0.898893937780338,1.22433556948361,1.28371610830437,3.83602275479425,0,0.199463657621632,0.852449501065388,2.03146467040009,0.56738522469114,0.622822248995575,1.7587406567972,1.0429658368404,2.38907729175628,1.81619850790011,0.736555271975129,1.58231193720442,4.01385043992689,1.91343869968539,1.67726916406701,1.79725809834392,0.600707571366025,0.803627933485401,1.99508920618874,4.57508357557907,3.65328307529268,0,0,0,0,0,0,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.862856803274467,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0,0,0,0,0.540031437238115,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201799707191048,0.425846237690326,0,0,0,0,0.390776190804081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.7896618469388,0,0,0.0927680981618513,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0.392616934229891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:10961109..10961114,+ | |||
}} |
Latest revision as of 03:17, 26 July 2015
Short description: | p@chr19:10961109..10961114, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:10961109..10961114, + |
Coexpression cluster: | C719_Neutrophils_CD14CD16_CD14_blood_Eosinophils_Peripheral_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.82e-87 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.82e-87 | 42 |
defensive cell | 5.27e-76 | 48 |
phagocyte | 5.27e-76 | 48 |
monopoietic cell | 3.24e-60 | 59 |
monocyte | 3.24e-60 | 59 |
monoblast | 3.24e-60 | 59 |
promonocyte | 3.24e-60 | 59 |
macrophage dendritic cell progenitor | 3.54e-58 | 61 |
myeloid leukocyte | 3.92e-54 | 72 |
myeloid lineage restricted progenitor cell | 1.30e-53 | 66 |
granulocyte monocyte progenitor cell | 8.84e-53 | 67 |
intermediate monocyte | 3.78e-47 | 9 |
CD14-positive, CD16-positive monocyte | 3.78e-47 | 9 |
myeloid cell | 3.09e-35 | 108 |
common myeloid progenitor | 3.09e-35 | 108 |
nongranular leukocyte | 1.14e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 2.60e-28 | 120 |
non-classical monocyte | 2.09e-27 | 3 |
CD14-low, CD16-positive monocyte | 2.09e-27 | 3 |
leukocyte | 2.19e-27 | 136 |
hematopoietic oligopotent progenitor cell | 1.16e-22 | 161 |
hematopoietic multipotent progenitor cell | 1.16e-22 | 161 |
hematopoietic stem cell | 1.37e-21 | 168 |
hematopoietic cell | 2.48e-20 | 177 |
mesenchymal cell | 1.75e-08 | 354 |
connective tissue cell | 3.00e-08 | 361 |
motile cell | 1.99e-07 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.94e-46 | 76 |
bone element | 1.08e-42 | 82 |
hematopoietic system | 4.21e-39 | 98 |
blood island | 4.21e-39 | 98 |
skeletal element | 1.13e-38 | 90 |
immune system | 2.44e-37 | 93 |
hemolymphoid system | 3.15e-35 | 108 |
skeletal system | 1.54e-34 | 100 |
musculoskeletal system | 1.70e-19 | 167 |
lateral plate mesoderm | 2.58e-17 | 203 |
mesoderm | 5.78e-10 | 315 |
mesoderm-derived structure | 5.78e-10 | 315 |
presumptive mesoderm | 5.78e-10 | 315 |
connective tissue | 6.24e-08 | 371 |