FFCP PHASE1:Hg19::chr1:185125341..185125373,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:185125341..185125373,+ | |||
|coexpression_cluster_id=C179 | |||
|description=CAGE_peak_at_chr1:185125341..185125373,+ | |||
|id=chr1:185125341..185125373,+ | |||
|ontology_enrichment_celltype=CL:0000738!5.87e-75!140;CL:0000037!8.20e-65!172;CL:0000566!8.20e-65!172;CL:0000988!9.07e-61!182;CL:0002032!1.98e-60!165;CL:0000837!1.98e-60!165;CL:0002087!4.68e-57!119;CL:0002031!7.91e-56!124;CL:0002057!2.91e-51!42;CL:0000860!8.81e-49!45;CL:0000766!8.55e-48!76;CL:0000763!4.79e-40!112;CL:0000049!4.79e-40!112;CL:0000557!3.66e-39!71;CL:0002009!2.80e-38!65;CL:0000839!6.70e-36!70;CL:0002194!9.32e-36!63;CL:0000576!9.32e-36!63;CL:0000040!9.32e-36!63;CL:0000559!9.32e-36!63;CL:0000134!3.74e-21!358;CL:0002320!4.08e-20!365;CL:0000542!3.19e-17!53;CL:0000051!3.19e-17!53;CL:0000219!4.90e-17!390;CL:0000838!1.66e-16!52;CL:0000034!1.84e-13!444;CL:0002393!1.91e-13!9;CL:0002397!1.91e-13!9;CL:0000048!3.13e-13!430;CL:0000094!1.05e-12!8;CL:0000723!1.28e-12!436;CL:0000081!1.74e-10!11;CL:0000236!1.87e-10!14;CL:0000945!4.68e-10!24;CL:0000826!4.68e-10!24;CL:0000791!8.62e-09!18;CL:0000789!8.62e-09!18;CL:0002420!8.62e-09!18;CL:0002419!8.62e-09!18;CL:0000790!8.62e-09!18;CL:0000624!2.19e-08!6;CL:0000453!6.47e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.40e-60;33!CL:0002057;9.40e-60;33!CL:0000576;9.91e-46;48!CL:0000473;6.05e-41;39!CL:0000234;6.05e-41;39!CL:0000766;2.04e-37;69!CL:0002087;1.20e-24;104!CL:0000094;1.18e-20;8!CL:0000738;1.38e-19;136!CL:0000236;2.89e-16;13!CL:0000763;3.52e-16;100!CL:0002393;1.64e-15;6!CL:0002397;1.64e-15;6!CL:0000081;1.52e-14;11!CL:0000988;1.58e-13;177!CL:0000542;1.13e-10;53!CL:0000219;3.79e-10;193!CL:0000791;3.65e-09;18!CL:0000789;3.65e-09;18!CL:0002419;3.65e-09;18!CL:0000775;5.76e-09;3!CL:0000767;1.70e-08;3!CL:0000623;2.31e-08;3!CL:0000875;4.44e-08;3!CL:0002396;4.44e-08;3!CL:0000226;5.64e-08;3!CL:0000842;5.64e-08;3!CL:0000945;7.95e-08;24!CL:0000624;8.99e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.84e-98,136;CL:0000860,4.48e-87,42;CL:0002057,4.48e-87,42;CL:0000037,1.58e-78,168;CL:0000766,1.66e-78,72;CL:0002031,3.26e-77,120;CL:0002087,1.10e-75,115;CL:0000473,1.23e-74,48;CL:0000234,1.23e-74,48;CL:0000988,1.32e-73,177;CL:0002032,2.93e-73,161;CL:0000837,2.93e-73,161;CL:0000557,7.26e-64,67;CL:0002009,1.40e-61,61;CL:0000839,1.77e-58,66;CL:0002194,3.07e-57,59;CL:0000576,3.07e-57,59;CL:0000040,3.07e-57,59;CL:0000559,3.07e-57,59;CL:0000763,1.85e-54,108;CL:0000049,1.85e-54,108;CL:0000134,1.93e-27,354;CL:0002320,1.54e-26,361;CL:0000219,2.26e-23,386;CL:0002393,6.55e-22,9;CL:0002397,6.55e-22,9;CL:0000094,1.21e-20,8;CL:0000034,5.24e-20,441;CL:0000048,1.69e-19,427;CL:0000723,5.80e-19,433;CL:0000838,2.58e-16,52;CL:0000542,6.82e-16,53;CL:0000051,6.82e-16,53;CL:0000236,5.88e-15,14;CL:0000081,1.55e-14,11;CL:0000791,3.91e-09,18;CL:0000789,3.91e-09,18;CL:0002420,3.91e-09,18;CL:0002419,3.91e-09,18;CL:0000790,3.91e-09,18;CL:0000775,5.69e-09,3;CL:0000767,1.76e-08,3;CL:0000623,2.31e-08,3;CL:0000825,2.31e-08,3;CL:0000875,4.44e-08,3;CL:0002396,4.44e-08,3;CL:0000226,5.92e-08,3;CL:0000842,5.92e-08,3;CL:0000945,7.82e-08,24;CL:0000826,7.82e-08,24;CL:0000624,9.79e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002057;1.21e-61;42!CL:0000049;1.49e-14;108!CL:0000051;1.13e-10;53!CL:0000790;3.65e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.53e-42!102;UBERON:0003061!8.53e-42!102;UBERON:0002193!1.19e-38!112;UBERON:0002371!2.26e-37!80;UBERON:0001474!1.84e-33!86;UBERON:0002405!1.18e-27!115;UBERON:0004765!8.90e-26!101;UBERON:0001434!8.90e-26!101;UBERON:0002384!2.88e-19!375;UBERON:0003081!1.05e-11!216;UBERON:0002204!3.36e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.68e-57,76;UBERON:0001474,2.35e-52,82;UBERON:0002390,2.16e-50,98;UBERON:0003061,2.16e-50,98;UBERON:0002405,1.14e-46,93;UBERON:0004765,1.49e-46,90;UBERON:0002193,1.93e-44,108;UBERON:0001434,1.33e-40,100;UBERON:0002384,2.59e-25,371;UBERON:0002204,3.52e-19,167;UBERON:0003081,3.03e-17,203 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.164201178899891,0,13.3743854128627,8.06041736004147,11.4563931253896,0,0,0,0,0,4.11040615068786,22.1598163412751,31.084389357872,29.29646754664,0,0.32389366601898,0,1.59938062657521,1.13362783106643,1.69808842831471,3.71886459049095,3.70051099219643,2.78735733805593,6.32923263108731,3.33008918487831,5.91205574721463,4.48169384957604,1.93645405075148,1.35426486594342,2.44715041405386,2.72906150057846,2.9214052977861,4.89734227793444,4.17207735198922,8.95071976118658,1.9791078011203,2.59302754908121,3.40979800426155,6.67481248845743,3.40431134814684,3.11411124497787,3.26623264833766,2.08593167368081,4.77815458351257,7.87019353423379,5.15588690382591,8.86094684834476,5.91514801673437,17.8587611970637,10.6925909209272,6.29040334420373,8.25972910628285,8.19700492155109,5.41524213108372,7.9566670879636,9.1332076882317,0,2.18455444504853,4.44754626931777,9.38806489646316,1.20118796110804,2.29900975981793,1.98313461835459,1.90810750907073,235.654169211312,102.766508139914,129.208351106327,3.96513985737078,6.1655941927969,0.263384084775077,10.622327586147,13.3623659334716,10.2800749499755,0,0.651844533267181,0.473447805734733,0,0.445641827540694,0.883817722424512,0.221533894583621,0.812411591295047,0.128091319725675,1.95089021339817,0.493313713811028,0.276350017785848,0,0.593146252648242,0,0,0,1.14966148080576,1.03088233644789,3.03623630423403,0,0,0,1.6563263098555,0.255973222308837,2.49861453104692,0,0,10.0803371612366,6.95344509037119,9.12393744461634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.0216629847199,58.1670396222488,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,4.35389042635621,3.45887888200707,6.56460653817176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257207374262142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.09310736726938,10.7813787429759,10.1390998661001,0,0,0,0,0,40.4463792931478,29.9161459204025,62.9911580422774,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.99627275756373,28.0428461064202,3.09509917629989,0.303127571446259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0.764637207142375,0.569647187174163,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0.371606350251437,0,0,0,0,0,0.423347165447766,0,0,0.228234679033192,0,0,0,0.1605880751037,0,0,0,0,0,0.166849141711909,0,0,0,0.270455678475983,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0.398495976502139,0,0,0,0.246169610922139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0.134802265961354,0,0,0.364909578431332,0,0,0,0,0,0.189559738885464,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0.160753148465019,0,0,14.398329059296,27.0830684095282,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0.121792598380896,0,0.544017803369474,0,0.612691153526923,0.655745261419609,0,0,0,0.1251909307065,0,0,0.124192805882767,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0.664324201566815,1.4720885483026,0,0,0,0,0,0.344429959321631,0.567515953566836,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0.158013611732727,0.116241425368125,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.111855431797792,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257831551894309,0.299823467774787,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,1.65833887891756,0,0,0,0,0,0,0.0636471582781649,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:185125341..185125373,+ | |||
}} |
Latest revision as of 01:24, 28 July 2015
Short description: | p@chr1:185125341..185125373, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:185125341..185125373, + |
Coexpression cluster: | C179_CD19_Peripheral_lymphoma_blood_lymph_spleen_tonsil |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.68e-57 | 76 |
bone element | 2.35e-52 | 82 |
hematopoietic system | 2.16e-50 | 98 |
blood island | 2.16e-50 | 98 |
immune system | 1.14e-46 | 93 |
skeletal element | 1.49e-46 | 90 |
hemolymphoid system | 1.93e-44 | 108 |
skeletal system | 1.33e-40 | 100 |
connective tissue | 2.59e-25 | 371 |
musculoskeletal system | 3.52e-19 | 167 |
lateral plate mesoderm | 3.03e-17 | 203 |