FFCP PHASE1:Hg19::chr20:34361372..34361410,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:34361372..34361410,+ | |||
|coexpression_cluster_id=C692 | |||
|description=CAGE_peak_at_chr20:34361372..34361410,+ | |description=CAGE_peak_at_chr20:34361372..34361410,+ | ||
|id=chr20:34361372..34361410,+ | |id=chr20:34361372..34361410,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.74e-59!140;CL:0000037!2.89e-49!172;CL:0000566!2.89e-49!172;CL:0002031!2.90e-48!124;CL:0002057!2.05e-46!42;CL:0000988!3.68e-46!182;CL:0002087!6.92e-46!119;CL:0002032!4.53e-45!165;CL:0000837!4.53e-45!165;CL:0000860!2.26e-42!45;CL:0000766!2.72e-39!76;CL:0000557!7.23e-33!71;CL:0000839!6.64e-30!70;CL:0002009!1.28e-29!65;CL:0000763!2.61e-28!112;CL:0000049!2.61e-28!112;CL:0002194!2.45e-27!63;CL:0000576!2.45e-27!63;CL:0000040!2.45e-27!63;CL:0000559!2.45e-27!63;CL:0000838!3.04e-15!52;CL:0000542!8.65e-15!53;CL:0000051!8.65e-15!53;CL:0002393!2.49e-14!9;CL:0002397!2.49e-14!9;CL:0000134!1.71e-12!358;CL:0002320!8.83e-12!365;CL:0000219!1.35e-10!390;CL:0000094!3.91e-10!8;CL:0000791!1.16e-09!18;CL:0000789!1.16e-09!18;CL:0002420!1.16e-09!18;CL:0002419!1.16e-09!18;CL:0000790!1.16e-09!18;CL:0000624!1.76e-09!6;CL:0000034!9.55e-09!444;CL:0000084!2.39e-08!25;CL:0000827!2.39e-08!25;CL:0000048!4.72e-08!430;CL:0000723!5.44e-08!436;CL:0000081!6.38e-07!11 | |ontology_enrichment_celltype=CL:0000738!7.74e-59!140;CL:0000037!2.89e-49!172;CL:0000566!2.89e-49!172;CL:0002031!2.90e-48!124;CL:0002057!2.05e-46!42;CL:0000988!3.68e-46!182;CL:0002087!6.92e-46!119;CL:0002032!4.53e-45!165;CL:0000837!4.53e-45!165;CL:0000860!2.26e-42!45;CL:0000766!2.72e-39!76;CL:0000557!7.23e-33!71;CL:0000839!6.64e-30!70;CL:0002009!1.28e-29!65;CL:0000763!2.61e-28!112;CL:0000049!2.61e-28!112;CL:0002194!2.45e-27!63;CL:0000576!2.45e-27!63;CL:0000040!2.45e-27!63;CL:0000559!2.45e-27!63;CL:0000838!3.04e-15!52;CL:0000542!8.65e-15!53;CL:0000051!8.65e-15!53;CL:0002393!2.49e-14!9;CL:0002397!2.49e-14!9;CL:0000134!1.71e-12!358;CL:0002320!8.83e-12!365;CL:0000219!1.35e-10!390;CL:0000094!3.91e-10!8;CL:0000791!1.16e-09!18;CL:0000789!1.16e-09!18;CL:0002420!1.16e-09!18;CL:0002419!1.16e-09!18;CL:0000790!1.16e-09!18;CL:0000624!1.76e-09!6;CL:0000034!9.55e-09!444;CL:0000084!2.39e-08!25;CL:0000827!2.39e-08!25;CL:0000048!4.72e-08!430;CL:0000723!5.44e-08!436;CL:0000081!6.38e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000766;5.19e-29;69!CL:0000860;2.28e-26;33!CL:0002057;2.28e-26;33!CL:0000576;2.69e-25;48!CL:0000473;4.53e-21;39!CL:0000234;4.53e-21;39!CL:0000094;1.20e-19;8!CL:0002393;7.15e-19;6!CL:0002397;7.15e-19;6!CL:0002087;1.82e-14;104!CL:0000081;5.63e-14;11!CL:0000738;2.94e-13;136!CL:0000624;2.42e-12;6!CL:0000623;6.47e-11;3!CL:0000875;2.74e-10;3!CL:0002396;2.74e-10;3!CL:0000767;5.36e-10;3!CL:0000791;1.05e-09;18!CL:0000789;1.05e-09;18!CL:0002419;1.05e-09;18!CL:0000763;1.19e-09;100!CL:0000988;2.43e-09;177!CL:0000084;2.55e-08;25!CL:0000771;4.17e-08;2!CL:0001014;2.31e-07;2!CL:0001016;2.31e-07;2!CL:0000542;2.41e-07;53!CL:0000219;5.19e-07;193!CL:0000097;6.48e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,2.65e-65,136;CL:0000766,8.09e-53,72;CL:0002031,1.44e-50,120;CL:0000037,1.83e-50,168;CL:0000860,4.28e-50,42;CL:0002057,4.28e-50,42;CL:0002032,9.12e-49,161;CL:0000837,9.12e-49,161;CL:0000988,3.00e-47,177;CL:0002087,1.32e-45,115;CL:0000473,7.10e-43,48;CL:0000234,7.10e-43,48;CL:0000557,2.47e-41,67;CL:0002009,8.86e-37,61;CL:0000839,1.41e-36,66;CL:0000763,3.64e-36,108;CL:0000049,3.64e-36,108;CL:0002194,8.84e-33,59;CL:0000576,8.84e-33,59;CL:0000040,8.84e-33,59;CL:0000559,8.84e-33,59;CL:0002393,1.10e-27,9;CL:0002397,1.10e-27,9;CL:0000094,1.37e-19,8;CL:0000134,4.03e-17,354;CL:0002320,1.56e-16,361;CL:0000219,1.81e-14,386;CL:0000081,6.20e-14,11;CL:0000034,2.12e-13,441;CL:0000624,8.54e-13,6;CL:0000048,1.11e-12,427;CL:0000723,2.54e-12,433;CL:0000838,1.66e-11,52;CL:0000542,3.23e-11,53;CL:0000051,3.23e-11,53;CL:0000623,6.20e-11,3;CL:0000825,6.20e-11,3;CL:0000875,2.17e-10,3;CL:0002396,2.17e-10,3;CL:0000791,5.67e-10,18;CL:0000789,5.67e-10,18;CL:0002420,5.67e-10,18;CL:0002419,5.67e-10,18;CL:0000790,5.67e-10,18;CL:0000767,6.30e-10,3;CL:0000084,1.87e-08,25;CL:0000827,1.87e-08,25;CL:0000771,4.19e-08,2;CL:0001014,3.23e-07,2;CL:0001016,3.23e-07,2;CL:0000097,6.50e-07,5;CL:0002028,6.50e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;8.58e-38;42!CL:0000790;1.05e-09;18!CL:0000049;4.80e-09;108!CL:0000051;2.41e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.39e-33!102;UBERON:0003061!3.39e-33!102;UBERON:0002371!1.30e-31!80;UBERON:0002193!7.09e-31!112;UBERON:0001474!2.72e-28!86;UBERON:0004765!8.14e-23!101;UBERON:0001434!8.14e-23!101;UBERON:0002405!4.84e-22!115;UBERON:0002384!2.63e-11!375;UBERON:0002204!2.02e-10!167;UBERON:0003081!7.37e-10!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.83e-35,76;UBERON:0002390,1.17e-33,98;UBERON:0003061,1.17e-33,98;UBERON:0001474,2.92e-32,82;UBERON:0002193,1.11e-29,108;UBERON:0002405,1.88e-29,93;UBERON:0004765,1.19e-28,90;UBERON:0001434,5.95e-25,100;UBERON:0002384,9.82e-16,371;UBERON:0002204,1.36e-12,167;UBERON:0003081,2.24e-12,203 | |||
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|short_description=p@chr20:34361372..34361410,+ | |short_description=p@chr20:34361372..34361410,+ | ||
}} | }} |
Latest revision as of 13:29, 28 July 2015
Short description: | p@chr20:34361372..34361410, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:34361372..34361410, + |
Coexpression cluster: | C692_Mast_Eosinophils_Neutrophils_Basophils_immature_CD4_CD19 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.83e-35 | 76 |
hematopoietic system | 1.17e-33 | 98 |
blood island | 1.17e-33 | 98 |
bone element | 2.92e-32 | 82 |
hemolymphoid system | 1.11e-29 | 108 |
immune system | 1.88e-29 | 93 |
skeletal element | 1.19e-28 | 90 |
skeletal system | 5.95e-25 | 100 |
connective tissue | 9.82e-16 | 371 |
musculoskeletal system | 1.36e-12 | 167 |
lateral plate mesoderm | 2.24e-12 | 203 |