FFCP PHASE1:Hg19::chr3:46412794..46412814,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:46412794..46412814,- | |||
|coexpression_cluster_id=C392 | |coexpression_cluster_id=C392 | ||
|description=CAGE_peak_at_chr3:46412794..46412814,- | |description=CAGE_peak_at_chr3:46412794..46412814,- | ||
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|ontology_enrichment_celltype=CL:0002009!1.70e-58!65;CL:0002194!4.28e-56!63;CL:0000576!4.28e-56!63;CL:0000040!4.28e-56!63;CL:0000559!4.28e-56!63;CL:0000557!5.22e-52!71;CL:0000766!1.58e-51!76;CL:0002057!3.80e-49!42;CL:0000839!1.01e-48!70;CL:0000860!6.43e-45!45;CL:0000738!1.16e-39!140;CL:0002087!7.53e-38!119;CL:0002031!1.56e-35!124;CL:0000763!1.49e-34!112;CL:0000049!1.49e-34!112;CL:0000037!2.26e-31!172;CL:0000566!2.26e-31!172;CL:0000988!2.26e-28!182;CL:0002032!6.59e-28!165;CL:0000837!6.59e-28!165;CL:0000840!3.27e-09!5;CL:0001029!3.27e-09!5;CL:0000451!4.12e-08!10 | |ontology_enrichment_celltype=CL:0002009!1.70e-58!65;CL:0002194!4.28e-56!63;CL:0000576!4.28e-56!63;CL:0000040!4.28e-56!63;CL:0000559!4.28e-56!63;CL:0000557!5.22e-52!71;CL:0000766!1.58e-51!76;CL:0002057!3.80e-49!42;CL:0000839!1.01e-48!70;CL:0000860!6.43e-45!45;CL:0000738!1.16e-39!140;CL:0002087!7.53e-38!119;CL:0002031!1.56e-35!124;CL:0000763!1.49e-34!112;CL:0000049!1.49e-34!112;CL:0000037!2.26e-31!172;CL:0000566!2.26e-31!172;CL:0000988!2.26e-28!182;CL:0002032!6.59e-28!165;CL:0000837!6.59e-28!165;CL:0000840!3.27e-09!5;CL:0001029!3.27e-09!5;CL:0000451!4.12e-08!10 | ||
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|ontology_enrichment_celltype_v019_2=CL:0002009,1.63e-103,61;CL:0002194,2.53e-102,59;CL:0000576,2.53e-102,59;CL:0000040,2.53e-102,59;CL:0000559,2.53e-102,59;CL:0000473,8.22e-96,48;CL:0000234,8.22e-96,48;CL:0000557,1.84e-93,67;CL:0000839,1.47e-90,66;CL:0000766,2.31e-90,72;CL:0000860,2.04e-76,42;CL:0002057,2.04e-76,42;CL:0000763,1.10e-62,108;CL:0000049,1.10e-62,108;CL:0000738,2.26e-52,136;CL:0002087,2.03e-50,115;CL:0002031,2.23e-50,120;CL:0000037,2.70e-42,168;CL:0002032,1.44e-40,161;CL:0000837,1.44e-40,161;CL:0000988,1.35e-39,177;CL:0000235,2.90e-21,6;CL:0000134,2.79e-14,354;CL:0000451,4.53e-14,10;CL:0000840,6.46e-14,5;CL:0001029,6.46e-14,5;CL:0002320,8.66e-14,361;CL:0000219,4.70e-12,386;CL:0000784,1.25e-10,3;CL:0000048,6.16e-10,427;CL:0000723,1.21e-09,433;CL:0000034,2.87e-09,441;CL:0000990,3.46e-09,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.20e-57;42!CL:0000049;1.82e-18;108!UBERON:0006241;1.09e-10;3!UBERON:0003057;1.09e-10;3 | |ontology_enrichment_development_v019=CL:0002057;1.20e-57;42!CL:0000049;1.82e-18;108!UBERON:0006241;1.09e-10;3!UBERON:0003057;1.09e-10;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-10;3!UBERON:0005174;1.09e-10;3!UBERON:0001137;1.09e-10;3 | |ontology_enrichment_uberon_v019=UBERON:0002240;1.09e-10;3!UBERON:0005174;1.09e-10;3!UBERON:0001137;1.09e-10;3 | ||
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|short_description=p@chr3:46412794..46412814,- | |short_description=p@chr3:46412794..46412814,- | ||
}} | }} |
Latest revision as of 21:23, 29 July 2015
Short description: | p@chr3:46412794..46412814, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr3:46412794..46412814, - |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.54e-81 | 76 |
bone element | 1.09e-74 | 82 |
skeletal element | 3.31e-67 | 90 |
immune system | 9.94e-65 | 93 |
hematopoietic system | 6.22e-61 | 98 |
blood island | 6.22e-61 | 98 |
skeletal system | 1.61e-59 | 100 |
hemolymphoid system | 2.20e-54 | 108 |
musculoskeletal system | 1.30e-31 | 167 |
lateral plate mesoderm | 3.42e-24 | 203 |
connective tissue | 4.07e-13 | 371 |
mesoderm | 5.85e-12 | 315 |
mesoderm-derived structure | 5.85e-12 | 315 |
presumptive mesoderm | 5.85e-12 | 315 |
spinal cord | 9.18e-11 | 3 |
dorsal region element | 9.18e-11 | 3 |
dorsum | 9.18e-11 | 3 |