FFCP PHASE1:Hg19::chr5:133450223..133450240,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:133450223..133450240,- | |||
|coexpression_cluster_id=C476 | |coexpression_cluster_id=C476 | ||
|description=CAGE_peak_at_chr5:133450223..133450240,- | |description=CAGE_peak_at_chr5:133450223..133450240,- | ||
|id=chr5:133450223..133450240,- | |id=chr5:133450223..133450240,- | ||
|ontology_enrichment_celltype=CL:0000738!1.98e-22!140;CL:0002087!1.54e-20!119;CL:0002031!1.24e-18!124;CL:0000037!2.11e-14!172;CL:0000566!2.11e-14!172;CL:0000860!3.22e-14!45;CL:0000988!8.93e-14!182;CL:0002032!1.58e-13!165;CL:0000837!1.58e-13!165;CL:0002057!2.92e-13!42;CL:0000791!2.79e-12!18;CL:0000789!2.79e-12!18;CL:0002420!2.79e-12!18;CL:0002419!2.79e-12!18;CL:0000790!2.79e-12!18;CL:0000542!2.16e-11!53;CL:0000051!2.16e-11!53;CL:0000838!2.37e-11!52;CL:0000084!6.66e-11!25;CL:0000827!6.66e-11!25;CL:0000625!7.29e-10!11;CL:0000766!1.22e-09!76;CL:0002009!8.09e-09!65;CL:0000557!1.26e-08!71;CL:0002194!2.17e-08!63;CL:0000576!2.17e-08!63;CL:0000040!2.17e-08!63;CL:0000559!2.17e-08!63;CL:0000839!7.14e-08!70 | |ontology_enrichment_celltype=CL:0000738!1.98e-22!140;CL:0002087!1.54e-20!119;CL:0002031!1.24e-18!124;CL:0000037!2.11e-14!172;CL:0000566!2.11e-14!172;CL:0000860!3.22e-14!45;CL:0000988!8.93e-14!182;CL:0002032!1.58e-13!165;CL:0000837!1.58e-13!165;CL:0002057!2.92e-13!42;CL:0000791!2.79e-12!18;CL:0000789!2.79e-12!18;CL:0002420!2.79e-12!18;CL:0002419!2.79e-12!18;CL:0000790!2.79e-12!18;CL:0000542!2.16e-11!53;CL:0000051!2.16e-11!53;CL:0000838!2.37e-11!52;CL:0000084!6.66e-11!25;CL:0000827!6.66e-11!25;CL:0000625!7.29e-10!11;CL:0000766!1.22e-09!76;CL:0002009!8.09e-09!65;CL:0000557!1.26e-08!71;CL:0002194!2.17e-08!63;CL:0000576!2.17e-08!63;CL:0000040!2.17e-08!63;CL:0000559!2.17e-08!63;CL:0000839!7.14e-08!70 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.99e-26;18!CL:0000789;4.99e-26;18!CL:0002419;4.99e-26;18!CL:0000084;1.84e-22;25!CL:0000625;4.37e-21;11!CL:0000860;6.98e-19;33!CL:0002057;6.98e-19;33!CL:0002087;2.57e-13;104!CL:0000473;4.29e-12;39!CL:0000234;4.29e-12;39!CL:0000542;1.20e-11;53!CL:0000576;2.88e-11;48!CL:0000624;1.25e-08;6!CL:0000766;1.14e-07;69!CL:0000623;5.50e-07;3!CL:0000738;6.56e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.66e-37,136;CL:0002087,1.25e-35,115;CL:0002031,3.18e-30,120;CL:0000037,7.70e-27,168;CL:0000791,5.16e-26,18;CL:0000789,5.16e-26,18;CL:0002420,5.16e-26,18;CL:0002419,5.16e-26,18;CL:0000790,5.16e-26,18;CL:0000988,1.49e-25,177;CL:0002032,8.05e-24,161;CL:0000837,8.05e-24,161;CL:0000084,1.93e-22,25;CL:0000827,1.93e-22,25;CL:0000838,7.22e-22,52;CL:0000542,2.76e-21,53;CL:0000051,2.76e-21,53;CL:0000625,4.69e-21,11;CL:0000860,6.84e-20,42;CL:0002057,6.84e-20,42;CL:0000473,1.77e-16,48;CL:0000234,1.77e-16,48;CL:0000766,9.25e-15,72;CL:0002194,9.09e-12,59;CL:0000576,9.09e-12,59;CL:0000040,9.09e-12,59;CL:0000559,9.09e-12,59;CL:0002009,3.61e-11,61;CL:0000839,8.88e-11,66;CL:0000557,1.62e-10,67;CL:0000624,1.22e-08,6;CL:0000763,3.22e-07,108;CL:0000049,3.22e-07,108;CL:0000623,5.42e-07,3;CL:0000825,5.42e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;4.99e-26;18!CL:0002057;2.92e-14;42!CL:0000051;1.20e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.02e-13!102;UBERON:0003061!2.02e-13!102;UBERON:0002193!1.67e-11!112;UBERON:0000178!7.02e-09!15;UBERON:0000179!7.02e-09!15;UBERON:0000463!7.02e-09!15 | |ontology_enrichment_uberon=UBERON:0002390!2.02e-13!102;UBERON:0003061!2.02e-13!102;UBERON:0002193!1.67e-11!112;UBERON:0000178!7.02e-09!15;UBERON:0000179!7.02e-09!15;UBERON:0000463!7.02e-09!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;9.05e-19;15!UBERON:0000179;9.05e-19;15!UBERON:0000463;9.05e-19;15!UBERON:0002390;1.89e-10;32!UBERON:0002193;4.63e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-22,98;UBERON:0003061,5.21e-22,98;UBERON:0002193,2.72e-21,108;UBERON:0000178,9.59e-19,15;UBERON:0000179,9.59e-19,15;UBERON:0000463,9.59e-19,15;UBERON:0002405,1.03e-10,93;UBERON:0002371,1.67e-08,76;UBERON:0001474,3.67e-08,82;UBERON:0004765,7.13e-07,90;UBERON:0003081,8.48e-07,203 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0.408001382488506,0,0,0,0,3.36218985290986,2.29881650459848,2.59745578335141,5.90046415273356,3.45446458287491,3.09632246632152,0,0,0,0,0,0,2.21598163412751,1.40381113229099,5.4252717678963,0,0.971680998056939,0.515151135268373,0.726991193897824,0.755751887377619,1.4555043671269,0,1.6446715520873,3.40677007984614,1.43846196161075,1.0246428261164,1.18241114944293,2.41321976515633,0.645484683583826,4.06279459783025,1.50593871634084,2.45615535052061,1.57306439111559,2.44867113896722,2.24650318953266,1.91801137739712,0.329851300186716,0.598390972864896,0.426224750532694,2.32167390902867,2.26954089876456,7.4738669879469,1.25624332628372,1.5644487552606,2.6062661364614,1.81619850790011,2.94622108790052,5.69632297393592,0,0,0,0.22465726229299,0.150176892841506,0,0.285012743741249,0,0.365328307529268,0,0,0,0.853460445133014,1.20118796110804,0,0.661044872784862,0,0,1.17447437874188,0.764546456250458,0,6.72610275577843,0,15.9334913792205,14.9344089844683,11.719285442972,0.167186495390678,12.0591238654428,14.6768819777767,23.3792074089494,0.222820913770347,0.294605907474837,0.886135578334485,1.62482318259009,0.128091319725675,0.130059347559878,1.31550323682941,0.829050053357545,2.60822777161547,21.2049785321746,31.5698177145861,24.0431704751447,0.226618685395132,7.2811893784365,7.55980380061786,12.1449452169361,15.6097053018807,17.5792532541233,9.50452044448374,12.6483100025329,19.581951506626,17.4903017173284,16.5744076430812,9.03240796613151,7.05623601286563,7.2208852861547,10.5721814834443,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0,0,0.398873881556595,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0.22452937262617,0.112611480483322,0,0,0.183201743930407,2.63560834872127,0,0,0,0,0.132409180813219,0,1.06400514659507,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0.352303495931295,0,0,0,0.122834317311768,0.929932030581889,0,0,0,0,0,0,0,0,0,0,0,0.538168907066586,0,0.211931901159562,0,0,0,0.18611685633159,0.337552664482532,0,0.252433774244115,0,0,0.710019185033229,0,0.169560592310488,0,0.272746120590835,0,0.609868530647977,0.265059536642971,1.16193942869518,1.0366105501537,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0,0,0.110293972732394,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,31.7853431578548,0.368965315629341,0,0,0,0,0,0.977424915930974,0,0,0,0,0,0,0,0,1.71697232418975,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,0.432359860250884,0.6312121671319,0.063497894292169,0.381988425558278,1.17217447210047,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0.144781306667579,0,0,0,17.5357376579715,11.6438890424139,10.3957859386596,0,0,0.773288812777695,0,0,0,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0.0868836144680828,0,0.343143423810856,6.6165768359324,5.82428342210265,4.90946765895844,1.21251028578504,0,0.30239029332968,0,0,0,0,0,0,0,0,0.355123450626254,0.328508624055237,0,0.464841513839837,0.362578348774867,0,0.0920809889358963,0,0,0.131124414959424,0.451199612907412,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0.165018999841176,0,0,0,0.386682873168488,0,0.15350367472613,0,0,0,0,0.0890320356467374,0,0,0.127612712494584,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0,0,0,0,0,0.443430153536676,0.229723400206959,11.1638474031077,9.94028369285088,6.83576624608995,10.0057345692271,10.2840568271549,7.13320642311989,3.7802200606668,7.9312517629427,0.106824071127473,0,0.245040215981032,0.185803175125719,0.144269212976445,14.3706523563797,0.478278818186467,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0.343505344755765,0,0,0.166849141711909,0,0.278406173895242,0,0,0,0,0,0.146508179271894,0.242721043499027,0,0,0.23874448473769,0.296964680832639,0.307160702099232,0,0,1.11308705022906,0,1.47787785689595,0.19924798825107,3.03912307084262,0,0.102268682502155,3.32328974744888,0,0.449341755736634,0.358042349351218,0,0.295930216910801,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.241192877250816,0,0,0,0,0.10893846351899,0.41827123283581,0,0,0.69169171316418,0.448788222048861,0.217294743844016,0.957003479195758,0.0915975934018623,1.06606955203727,11.241262801531,0,0,0.225595660617181,0.392125068635479,0.167821586975843,0,0.158936578980379,0.210998064528027,0.652931232636591,0.282706142867882,0,0.995261931078505,0.353830258013357,0,1.18608451472249,0.123563938946503,0,0.606610196826093,0,0.234264445725339,0.182454789215666,0.782658475728359,0.485560759068186,0,2.41981432097328,0,0.189559738885464,0.901940516486955,0.207376382794494,0,0.330991955875499,0.627865836814451,0,0.569219092059585,0.277349346026277,0.173559738335131,0,0.0870592065804026,2.44617335538842,0,0.677294319023596,0.65780385377567,0.410577285266046,0.193978032976839,0,0,0,0.596143835108969,0.126621591911757,0.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| ||
|short_description=p@chr5:133450223..133450240,- | |short_description=p@chr5:133450223..133450240,- | ||
}} | }} |
Latest revision as of 09:45, 30 July 2015
Short description: | p@chr5:133450223..133450240, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:133450223..133450240, - |
Coexpression cluster: | C476_thymus_acute_Hodgkin_CD4_CD8_chronic_vein |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.21e-22 | 98 |
blood island | 5.21e-22 | 98 |
hemolymphoid system | 2.72e-21 | 108 |
blood | 9.59e-19 | 15 |
haemolymphatic fluid | 9.59e-19 | 15 |
organism substance | 9.59e-19 | 15 |
immune system | 1.03e-10 | 93 |
bone marrow | 1.67e-08 | 76 |
bone element | 3.67e-08 | 82 |
skeletal element | 7.13e-07 | 90 |
lateral plate mesoderm | 8.48e-07 | 203 |