FFCP PHASE1:Hg19::chr5:180258547..180258558,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_uc003mmj.1_5end | |association_with_transcript=36bp_to_uc003mmj.1_5end | ||
|cluster_id=chr5:180258547..180258558,- | |||
|coexpression_cluster_id=C0 | |coexpression_cluster_id=C0 | ||
|description=CAGE_peak_3_at_uc003mmj.1_5end | |description=CAGE_peak_3_at_uc003mmj.1_5end | ||
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|ontology_enrichment_celltype=CL:0002057!8.92e-31!42;CL:0000860!1.44e-29!45;CL:0002194!3.55e-29!63;CL:0000576!3.55e-29!63;CL:0000040!3.55e-29!63;CL:0000559!3.55e-29!63;CL:0002009!1.72e-27!65;CL:0000839!1.20e-25!70;CL:0000557!6.25e-24!71;CL:0000766!4.07e-23!76;CL:0002087!3.05e-17!119;CL:0000763!4.87e-17!112;CL:0000049!4.87e-17!112;CL:0002031!1.19e-14!124;CL:0000738!8.94e-14!140;CL:0000988!6.78e-13!182;CL:0002032!3.05e-12!165;CL:0000837!3.05e-12!165;CL:0000037!1.26e-11!172;CL:0000566!1.26e-11!172 | |ontology_enrichment_celltype=CL:0002057!8.92e-31!42;CL:0000860!1.44e-29!45;CL:0002194!3.55e-29!63;CL:0000576!3.55e-29!63;CL:0000040!3.55e-29!63;CL:0000559!3.55e-29!63;CL:0002009!1.72e-27!65;CL:0000839!1.20e-25!70;CL:0000557!6.25e-24!71;CL:0000766!4.07e-23!76;CL:0002087!3.05e-17!119;CL:0000763!4.87e-17!112;CL:0000049!4.87e-17!112;CL:0002031!1.19e-14!124;CL:0000738!8.94e-14!140;CL:0000988!6.78e-13!182;CL:0002032!3.05e-12!165;CL:0000837!3.05e-12!165;CL:0000037!1.26e-11!172;CL:0000566!1.26e-11!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.13e-110;33!CL:0002057;3.13e-110;33!CL:0000473;2.95e-86;39!CL:0000234;2.95e-86;39!CL:0000576;9.66e-63;48!CL:0000766;5.07e-39;69!CL:0000763;1.88e-17;100!CL:0002087;8.29e-15;104!CL:0000738;1.78e-10;136 | |ontology_enrichment_celltype_v019=CL:0000860;3.13e-110;33!CL:0002057;3.13e-110;33!CL:0000473;2.95e-86;39!CL:0000234;2.95e-86;39!CL:0000576;9.66e-63;48!CL:0000766;5.07e-39;69!CL:0000763;1.88e-17;100!CL:0002087;8.29e-15;104!CL:0000738;1.78e-10;136 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.21e-114,42;CL:0002057,4.21e-114,42;CL:0000473,5.96e-111,48;CL:0000234,5.96e-111,48;CL:0002194,3.52e-87,59;CL:0000576,3.52e-87,59;CL:0000040,3.52e-87,59;CL:0000559,3.52e-87,59;CL:0002009,4.12e-84,61;CL:0000839,3.05e-77,66;CL:0000557,5.46e-76,67;CL:0000766,3.07e-70,72;CL:0000763,2.12e-44,108;CL:0000049,2.12e-44,108;CL:0002087,3.09e-41,115;CL:0002031,3.35e-39,120;CL:0000738,1.10e-33,136;CL:0002032,3.04e-27,161;CL:0000837,3.04e-27,161;CL:0000037,8.80e-26,168;CL:0000988,4.52e-24,177;CL:0000134,2.07e-10,354;CL:0002320,4.80e-10,361;CL:0000219,9.20e-09,386;CL:0000048,3.38e-07,427;CL:0000723,5.54e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;6.41e-82;42!CL:0000049;1.78e-16;108 | |ontology_enrichment_development_v019=CL:0002057;6.41e-82;42!CL:0000049;1.78e-16;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;1.33e-09;2 | |ontology_enrichment_disease_v019=DOID:3493;1.33e-09;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,1.42e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0002371!3.11e-21!80;UBERON:0002390!4.13e-21!102;UBERON:0003061!4.13e-21!102;UBERON:0001474!3.11e-20!86;UBERON:0004765!2.17e-19!101;UBERON:0001434!2.17e-19!101;UBERON:0002193!2.72e-19!112;UBERON:0002405!4.40e-14!115;UBERON:0002204!4.67e-07!167;UBERON:0003081!9.91e-07!216 | |ontology_enrichment_uberon=UBERON:0002371!3.11e-21!80;UBERON:0002390!4.13e-21!102;UBERON:0003061!4.13e-21!102;UBERON:0001474!3.11e-20!86;UBERON:0004765!2.17e-19!101;UBERON:0001434!2.17e-19!101;UBERON:0002193!2.72e-19!112;UBERON:0002405!4.40e-14!115;UBERON:0002204!4.67e-07!167;UBERON:0003081!9.91e-07!216 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.55e-66,76;UBERON:0001474,8.13e-61,82;UBERON:0004765,9.10e-55,90;UBERON:0002405,9.17e-53,93;UBERON:0002390,1.07e-49,98;UBERON:0003061,1.07e-49,98;UBERON:0001434,1.49e-48,100;UBERON:0002193,2.12e-44,108;UBERON:0002204,5.54e-26,167;UBERON:0003081,2.25e-21,203;UBERON:0000926,9.42e-13,315;UBERON:0004120,9.42e-13,315;UBERON:0006603,9.42e-13,315;UBERON:0002384,1.51e-09,371 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.446961094427288,0,2.53299878168311,0,3.3954131665979,0,0,0,0,0,0.331397375727916,0,0,0.730310090387373,0,0,0.204000691244253,0.313454721478088,0,0.273748850145768,0,0.382067028739756,0.410502947249729,0.157421562627358,0.786728553697808,0,0.464448369948228,0,0.30120591877825,0.369754010166788,0.46480320348181,0.284338464974843,0,0,0.802177789880567,1.08505435357926,0.895661896959697,0.32389366601898,0.77272670290256,4.65274364094607,10.2026504795979,6.54976965207104,6.74044207026485,13.1573724166984,7.74265927237759,6.90461741573161,6.40401766322752,2.60130452877444,10.6871161028352,12.9096936716765,16.251178391321,9.60035931667284,8.18718450173537,2.69668181334102,10.4068523406107,2.56743221660875,9.59005688698562,1.9791078011203,3.59034583718937,3.83602275479425,4.35313857942876,9.07816359505824,10.5879782329248,7.03496262718881,7.82224377630302,2.82345498116652,1.81619850790011,1.84138817993782,2.21523671208619,0.633765858935825,3.18906449947565,0.628975936525128,0.673971786878971,1.50176892841506,0,0.285012743741249,4.57508357557907,0.91332076882317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334372990781356,0,0,0,0,0,0,0,0.128091319725675,0.130059347559878,0.164437904603676,0,0,0,0,0,0.226618685395132,0,0,0,0.318565414324097,0,0,0.150575119077773,0,0,0,0,0,0,0.144824403882799,0,0.670700859703636,0,0,0,0,0,0,0,0,0,0.0654895377488563,0.364295288292542,0,0.324547393654683,0.696518949197069,0.531831842075461,0,0,0,0.198762407366705,0.860234595106124,0.347140501607594,0,0.419499436209906,0,0.208994966536811,0,0.35576626268671,0,0,0,0.488124115096339,0,0,0.0892997282840798,0,0.225222960966644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0.151357427644931,0,0.234321431833797,0,0,0.298897361103602,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0.438977620880838,0,0.300476117813194,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.184099797284599,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.236613600079688,0.168584690078102,0.482022059766964,0,0.217879444092406,0.237270619111097,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0.190254152234598,0,0,0,0.468008530278475,0.594524649154913,0,0.16798212819886,0,0.0895585227028483,0,0.383382679165211,0,0.176096868026452,0,0,0,0.063497894292169,0.763976851116555,0,0,0.205654985406647,0.600686115687835,0.857479297891735,0,0,0.1466765716419,0.129271715757778,0,0,0.26593811658487,0,0.514414748524284,0,0,0,0,0,0,0,0,0,0,0,2.43247561282381,1.00451418286425,0,0.239624855491583,0,0,0,0,0,0.336255431980582,0,0.215627574859517,0,0,0,0,0,0.637938751653163,0,0,0,0.36807447515742,0,0.271265023699736,0,0,0,0.117141414992713,0,0,1.03473071292505,0.664225598535437,0.184369168541703,0,0.195801157462741,0.343143423810856,0,0.215714200818617,0.533637789017222,0.606255142892519,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0.483437798366489,0,0.0920809889358963,0,0,0.131124414959424,0,0,0,0,0.105551628892876,0,0.170093705276516,0,1.54227252690289,0,0,0,0,0,0.219259876645935,0,0,0.328014645699706,0,0.412164046590889,0.0915694648183434,0.165018999841176,0,0,0,0.193341436584244,0.154048617114644,0.15350367472613,0.137836572484531,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.2023155617111,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0.202910376962704,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0.75894634753143,0,0,0,0,0.376575203107117,0,0,0.443430153536676,0,0.507447609232169,0,0.569647187174163,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.399158742865633,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0.321176150207399,0.201799707191048,0,0,0,0,0.166849141711909,0.781552381608161,0,0,0,0,0,0,0.586032717087576,0.121360521749513,0.111443384277478,0,0,0,0,0,0.281338832821026,0.222617410045812,0.329607748453519,0.211125408127993,0,0,0.251932747854276,0,0.123084805461069,0,0.269605053441981,0.179021174675609,0.511572370226872,0.295930216910801,0,0,2.90799823828566,0.278304294485554,1.99613798001194,0,0,1.44999915086959,0.341380344856499,0,0.472775363535873,0,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0.32681539055697,0,0,0.113942055847001,0,0,0.217294743844016,0,0.0915975934018623,0.533034776018635,0,0,0.166211681900156,0,0.588187602953219,0.167821586975843,0,0,0,0.163232808159148,0.565412285735763,0,0,0.353830258013357,0.611030144933625,0.889563386041866,0.741383633679017,0.313265848516366,0.202203398942031,0,0,0,0,0,0,0,0,0.126373159256976,0.300646838828985,0.207376382794494,0,0,0,0,0,0,0,0.0979923974143777,0.261177619741208,0.698906672968121,0.171986032471617,0,0.219267951258557,0.0821154570532092,0.193978032976839,0,0,0,0.19871461170299,0,0.391102765469606,0,0.213452994739353,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0.136905378891993,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0.201550417460179,0,0,0,0,0,0.196854963029498,0,0,0,0,0,0.41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|short_description=p3@uc003mmj.1 | |short_description=p3@uc003mmj.1 | ||
}} | }} |
Latest revision as of 14:02, 30 July 2015
Short description: | p3@uc003mmj.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_uc003mmj.1_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 36bp_to_uc003mmj.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.21e-114 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.21e-114 | 42 |
defensive cell | 5.96e-111 | 48 |
phagocyte | 5.96e-111 | 48 |
monopoietic cell | 3.52e-87 | 59 |
monocyte | 3.52e-87 | 59 |
monoblast | 3.52e-87 | 59 |
promonocyte | 3.52e-87 | 59 |
macrophage dendritic cell progenitor | 4.12e-84 | 61 |
myeloid lineage restricted progenitor cell | 3.05e-77 | 66 |
granulocyte monocyte progenitor cell | 5.46e-76 | 67 |
myeloid leukocyte | 3.07e-70 | 72 |
myeloid cell | 2.12e-44 | 108 |
common myeloid progenitor | 2.12e-44 | 108 |
nongranular leukocyte | 3.09e-41 | 115 |
hematopoietic lineage restricted progenitor cell | 3.35e-39 | 120 |
leukocyte | 1.10e-33 | 136 |
hematopoietic oligopotent progenitor cell | 3.04e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-27 | 161 |
hematopoietic stem cell | 8.80e-26 | 168 |
hematopoietic cell | 4.52e-24 | 177 |
mesenchymal cell | 2.07e-10 | 354 |
connective tissue cell | 4.80e-10 | 361 |
motile cell | 9.20e-09 | 386 |
multi fate stem cell | 3.38e-07 | 427 |
somatic stem cell | 5.54e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.55e-66 | 76 |
bone element | 8.13e-61 | 82 |
skeletal element | 9.10e-55 | 90 |
immune system | 9.17e-53 | 93 |
hematopoietic system | 1.07e-49 | 98 |
blood island | 1.07e-49 | 98 |
skeletal system | 1.49e-48 | 100 |
hemolymphoid system | 2.12e-44 | 108 |
musculoskeletal system | 5.54e-26 | 167 |
lateral plate mesoderm | 2.25e-21 | 203 |
mesoderm | 9.42e-13 | 315 |
mesoderm-derived structure | 9.42e-13 | 315 |
presumptive mesoderm | 9.42e-13 | 315 |
connective tissue | 1.51e-09 | 371 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.42e-09 | 2 |