FFCP PHASE1:Hg19::chr5:77683792..77683799,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:77683792..77683799,+ | |||
|coexpression_cluster_id=C2677 | |||
|description=CAGE_peak_at_chr5:77683792..77683799,+ | |description=CAGE_peak_at_chr5:77683792..77683799,+ | ||
|id=chr5:77683792..77683799,+ | |id=chr5:77683792..77683799,+ | ||
|ontology_enrichment_celltype=CL:0002553!2.16e-26!1;CL:0000167!2.78e-26!1;CL:0000164!2.78e-26!1;CL:0000502!2.78e-26!1;CL:0000172!2.78e-26!1;CL:0000173!2.78e-26!1;CL:0002351!2.78e-26!1;CL:0002563!1.43e-25!4;CL:0002253!1.21e-13!2;CL:0000242!1.55e-13!2 | |ontology_enrichment_celltype=CL:0002553!2.16e-26!1;CL:0000167!2.78e-26!1;CL:0000164!2.78e-26!1;CL:0000502!2.78e-26!1;CL:0000172!2.78e-26!1;CL:0000173!2.78e-26!1;CL:0002351!2.78e-26!1;CL:0002563!1.43e-25!4;CL:0002253!1.21e-13!2;CL:0000242!1.55e-13!2 | ||
|ontology_enrichment_celltype_v019=CL:0002553;1.23e-66;1!CL:0000167;2.39e-66;1!CL:0000164;2.39e-66;1!CL:0000502;2.39e-66;1!CL:0000172;2.39e-66;1!CL:0000173;2.39e-66;1!CL:0000082;5.27e-15;19!CL:0000150;1.12e-08;9!CL:0000163;1.12e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002553,1.23e-66,1;CL:0000167,2.39e-66,1;CL:0000164,2.39e-66,1;CL:0000502,2.39e-66,1;CL:0000172,2.39e-66,1;CL:0000173,2.39e-66,1;CL:0002351,2.39e-66,1;CL:0000082,5.27e-15,19;CL:0000150,1.12e-08,9;CL:0000163,1.12e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002351;2.39e-66;1!UBERON:0008947;3.10e-10;29!UBERON:0001041;6.23e-10;30 | |||
|ontology_enrichment_disease=DOID:4430!2.78e-26!1;DOID:1324!1.18e-07!15;DOID:5409!1.49e-07!4;DOID:0050615!3.14e-07!16 | |||
|ontology_enrichment_disease_v019=DOID:4430;2.39e-66;1!DOID:1324;1.13e-18;15!DOID:5409;1.03e-17;4!DOID:0050615;1.39e-17;16!DOID:169;2.45e-12;6!DOID:1325;9.89e-11;7!DOID:3904;9.89e-11;7!DOID:3905;1.21e-08;9!DOID:171;6.13e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,2.39e-66,1;DOID:1324,1.13e-18,15;DOID:5409,1.03e-17,4;DOID:0050615,1.39e-17,16;DOID:169,2.45e-12,6;DOID:1325,9.89e-11,7;DOID:3904,9.89e-11,7;DOID:3905,1.21e-08,9;DOID:171,6.13e-08,10 | |||
|ontology_enrichment_uberon=UBERON:0001242!1.43e-25!4;UBERON:0001262!1.43e-25!4;UBERON:0004786!1.43e-25!4;UBERON:0004808!1.43e-25!4;UBERON:0001277!1.43e-25!4;UBERON:0003350!1.10e-20!5;UBERON:0000007!9.40e-14!2;UBERON:0000485!5.83e-12!9;UBERON:0000344!3.27e-09!12;UBERON:0000060!3.27e-09!12;UBERON:0003296!1.59e-07!4;UBERON:0010133!1.59e-07!4;UBERON:0001052!1.80e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004802;5.27e-15;19!UBERON:0000115;5.27e-15;19!UBERON:0002048;4.01e-13;22!UBERON:0004807;4.01e-13;22!UBERON:0000117;4.01e-13;22!UBERON:0000171;4.01e-13;22!UBERON:0000170;4.01e-13;22!UBERON:0005181;2.79e-09;35!UBERON:0000072;2.80e-09;37!UBERON:0005911;1.26e-08;36!UBERON:0005178;5.59e-08;34!UBERON:0002224;5.59e-08;34!UBERON:0000065;4.45e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004802,5.27e-15,19;UBERON:0000115,5.27e-15,19;UBERON:0002048,4.01e-13,22;UBERON:0000117,4.01e-13,22;UBERON:0000171,4.01e-13,22;UBERON:0000170,4.01e-13,22;UBERON:0005597,4.01e-13,22;UBERON:0000118,4.01e-13,22;UBERON:0004807,1.47e-10,28;UBERON:0005178,6.80e-09,34;UBERON:0002224,6.80e-09,34;UBERON:0005181,1.14e-08,35;UBERON:0005153,2.92e-08,37;UBERON:0008947,4.52e-08,38;UBERON:0003258,4.52e-08,38;UBERON:0000072,1.00e-06,47;UBERON:0005157,1.00e-06,47 | |||
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|short_description=p@chr5:77683792..77683799,+ | |short_description=p@chr5:77683792..77683799,+ | ||
}} | }} |
Latest revision as of 16:33, 30 July 2015
Short description: | p@chr5:77683792..77683799, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:77683792..77683799, + |
Coexpression cluster: | C2677_somatostatinoma_nonsmall_rhabdomyosarcoma_pons_small_neuroblastoma_kidney |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lung fibroblast | 1.23e-66 | 1 |
peptide hormone secreting cell | 2.39e-66 | 1 |
enteroendocrine cell | 2.39e-66 | 1 |
type D enteroendocrine cell | 2.39e-66 | 1 |
somatostatin secreting cell | 2.39e-66 | 1 |
pancreatic D cell | 2.39e-66 | 1 |
progenitor cell of endocrine pancreas | 2.39e-66 | 1 |
epithelial cell of lung | 5.27e-15 | 19 |
glandular epithelial cell | 1.12e-08 | 9 |
endocrine cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
respiratory tract epithelium | 5.27e-15 | 19 |
lung epithelium | 5.27e-15 | 19 |
lung | 4.01e-13 | 22 |
respiratory tube | 4.01e-13 | 22 |
respiration organ | 4.01e-13 | 22 |
pair of lungs | 4.01e-13 | 22 |
lung primordium | 4.01e-13 | 22 |
lung bud | 4.01e-13 | 22 |
respiratory system epithelium | 1.47e-10 | 28 |
thoracic cavity element | 6.80e-09 | 34 |
thoracic cavity | 6.80e-09 | 34 |
thoracic segment organ | 1.14e-08 | 35 |
epithelial bud | 2.92e-08 | 37 |
respiratory primordium | 4.52e-08 | 38 |
endoderm of foregut | 4.52e-08 | 38 |
segment of respiratory tract | 1.00e-06 | 47 |
epithelial fold | 1.00e-06 | 47 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 2.39e-66 | 1 |
lung cancer | 1.13e-18 | 15 |
lung small cell carcinoma | 1.03e-17 | 4 |
respiratory system cancer | 1.39e-17 | 16 |
neuroendocrine tumor | 2.45e-12 | 6 |
bronchus cancer | 9.89e-11 | 7 |
bronchogenic carcinoma | 9.89e-11 | 7 |
lung carcinoma | 1.21e-08 | 9 |
neuroectodermal tumor | 6.13e-08 | 10 |