FFCP PHASE1:Hg19::chr6:35283957..35283963,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr6:35283957..35283963,+ to FFCP PHASE1:Hg19::chr6:35283957..35283963,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr6:35283957..35283963,+ | |||
|coexpression_cluster_id=C1205 | |||
|description=CAGE_peak_at_chr6:35283957..35283963,+ | |||
|id=chr6:35283957..35283963,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.15e-54!172;CL:0000566!2.15e-54!172;CL:0000988!2.07e-51!182;CL:0002032!5.14e-51!165;CL:0000837!5.14e-51!165;CL:0000738!9.40e-45!140;CL:0002087!3.42e-41!119;CL:0002031!8.92e-39!124;CL:0000542!8.59e-30!53;CL:0000051!8.59e-30!53;CL:0000838!2.75e-29!52;CL:0000763!9.84e-22!112;CL:0000049!9.84e-22!112;CL:0000084!5.61e-16!25;CL:0000827!5.61e-16!25;CL:0000766!1.90e-14!76;CL:0000557!1.22e-12!71;CL:0000839!3.11e-12!70;CL:0000945!5.18e-12!24;CL:0000826!5.18e-12!24;CL:0000791!8.50e-12!18;CL:0000789!8.50e-12!18;CL:0002420!8.50e-12!18;CL:0002419!8.50e-12!18;CL:0000790!8.50e-12!18;CL:0002194!1.53e-11!63;CL:0000576!1.53e-11!63;CL:0000040!1.53e-11!63;CL:0000559!1.53e-11!63;CL:0002009!1.58e-11!65;CL:0002057!1.72e-10!42;CL:0000860!4.91e-09!45;CL:0000134!4.48e-08!358;CL:0002320!3.26e-07!365;CL:0000236!3.66e-07!14;CL:0000625!8.79e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000084;2.47e-25;25!CL:0000542;3.04e-24;53!CL:0000791;2.72e-20;18!CL:0000789;2.72e-20;18!CL:0002419;2.72e-20;18!CL:0000945;4.10e-13;24!CL:0000236;4.05e-11;13!CL:0000625;4.60e-11;11!CL:0002087;6.45e-10;104!CL:0000624;3.16e-09;6!CL:0000623;5.34e-08;3!CL:0000988;5.56e-08;177!CL:0000738;6.11e-08;136!CL:0000226;1.59e-07;3!CL:0000842;1.59e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,5.07e-42,52;CL:0000542,5.11e-41,53;CL:0000051,5.11e-41,53;CL:0000037,5.70e-41,168;CL:0002032,1.58e-38,161;CL:0000837,1.58e-38,161;CL:0000988,6.04e-38,177;CL:0002087,1.91e-32,115;CL:0000738,2.37e-32,136;CL:0002031,3.71e-27,120;CL:0000084,1.51e-25,25;CL:0000827,1.51e-25,25;CL:0000791,1.40e-20,18;CL:0000789,1.40e-20,18;CL:0002420,1.40e-20,18;CL:0002419,1.40e-20,18;CL:0000790,1.40e-20,18;CL:0000945,5.96e-13,24;CL:0000826,5.96e-13,24;CL:0000625,3.91e-11,11;CL:0000236,2.06e-10,14;CL:0000134,3.84e-10,354;CL:0002320,1.25e-09,361;CL:0000624,1.63e-09,6;CL:0000763,1.28e-08,108;CL:0000049,1.28e-08,108;CL:0000623,5.80e-08,3;CL:0000825,5.80e-08,3;CL:0000219,7.51e-08,386;CL:0000226,1.53e-07,3;CL:0000842,1.53e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.04e-24;53!CL:0000790;2.72e-20;18 | |||
|ontology_enrichment_disease=DOID:2531!9.19e-19!51;DOID:0060083!9.19e-19!51;DOID:1240!1.28e-15!39;DOID:8692!3.76e-11!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.23e-11;39!DOID:8692;1.85e-09;31!DOID:2531;7.52e-09;51!DOID:0060083;7.52e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.21e-13,39;DOID:2531,5.96e-13,51;DOID:0060083,5.96e-13,51;DOID:8692,1.20e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.75e-16!102;UBERON:0003061!1.75e-16!102;UBERON:0002193!2.22e-13!112;UBERON:0002371!2.96e-11!80;UBERON:0001474!2.68e-09!86;UBERON:0002405!2.96e-07!115;UBERON:0004765!5.74e-07!101;UBERON:0001434!5.74e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.66e-08;15!UBERON:0000179;4.66e-08;15!UBERON:0000463;4.66e-08;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,6.18e-09,371;UBERON:0000178,3.19e-08,15;UBERON:0000179,3.19e-08,15;UBERON:0000463,3.19e-08,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22261449196722,1.06730766284929,1.25937250101887,0,1.91914699048606,0.619264493264304,0,0,0,1.00707360754392,0.426507697462265,0.587200878669695,1.66198622559563,3.20871115952227,6.07630438004385,0.671746422719773,0.32389366601898,0.515151135268373,1.59938062657521,0.377875943688809,1.4555043671269,0.697287110717054,0.411167888021826,0.309706370895104,0.28769239232215,0.512321413058201,0.236482229888585,1.37898272294647,1.29096936716765,0,0.564727018627814,1.09162460023138,0.224723484445085,0.612167784741805,0.320929027076094,1.27867425159808,0,0,0.426224750532694,0.870627715885752,0,0,0.251248665256743,0.521482918420201,0.434377689410233,0.605399502633369,0,0.316462387440884,0,0.425208599930087,0.838634582033504,0.22465726229299,0.150176892841506,0.32145117339416,0.285012743741249,0.79566670879636,0.365328307529268,0,1.63841583378639,1.77901850772711,2.13365111283254,0.400395987036012,1.72425731986345,1.32208974556972,0,1.70763890732835,2.34894875748376,4.96955196562797,0,0,0.263384084775077,8.06510057466716,7.46720449223413,5.75684197198626,0.83593247695339,1.62961133316795,2.36723902867367,1.94826728407911,1.89397776704795,0.589211814949674,0.886135578334485,2.43723477388514,11.2720361358594,7.54344215847294,9.20852265780586,6.90875044464621,1.73881851441031,2.37258501059297,3.21048993707656,4.18142095219907,2.03956816855619,1.91610246800961,0.68725489096526,1.01207876807801,1.91139248594458,1.30216690771284,0.950452044448374,0.150575119077773,1.02389288923535,3.74792179657038,1.4206635122641,0,1.61285394579786,8.02320587350522,10.8618302912099,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,0.130979075497713,0,0,0,0.348259474598534,0.664789802594326,1.19245312152671,0,0.74291500265913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,0,0.436094052142534,0,0,0.264818361626438,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0.337552664482532,0,0,0,0,0,0,0,0,0.818238361772504,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0,0.219500570817251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.148631162288728,0.93733833986777,0.16798212819886,0,0.0895585227028483,0,0,0.492663237895943,0.264145302039678,0.207328115540772,0.576479813667846,1.13618190083742,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0.502257091432126,2.10833939483032,0,0,0,0,0,0,2.01753259188349,3.15249216323084,6.253199670926,10.0107568298204,0,0,0,0,0,1.49801404789436,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27444828735176,4.52999821719095,2.66818894508611,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0.200506470303285,1.19705285616665,0,0,0,0,0,0,0,0.105551628892876,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0,0,0.165284915360978,0.576570202095319,0.510450849978337,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.353437207037059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0.288666338176536,0,0,0.0941438007767792,0,0,0.443430153536676,0.229723400206959,1.52234282769651,2.29391162142713,3.41788312304498,1.90585420366231,0,0,0,3.96562588147135,0.106824071127473,0,0.490080431962063,0.743212700502875,0.865615277858669,0.782560276832555,1.59426272728822,3.39284931435788,1.1490322207942,2.96343015813436,0.649243880549111,1.12318871245384,1.82587743226554,1.09675927041116,5.01268954180134,0.846458889008016,0.481764225311099,0.605399121573143,1.27753871307098,0.687010689511529,1.22896305723383,0.894704431569664,0.333698283423817,0.586164286206121,0,0,0,0.66614393599564,2.81974010175699,0,0,0.121360521749513,1.11443384277478,0.284136146806413,0,0.296964680832639,0.307160702099232,0,0.140669416410513,0,1.97764649072111,0.211125408127993,0,1.10513566212459,0,0,0.246169610922139,0,0,0,0.511572370226872,0.0986434056369336,0,0,0,0,0,0,0.0874599999961957,0,0.341380344856499,0.762760950878299,0.709163045303809,0,1.45802306691627,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.557694977114413,0,0,0.23056390438806,0.448788222048861,0.651884231532048,0,0,0,1.02193298195737,3.1396051279005,1.32969345520125,0,0.19606253431774,0,0.189753732724185,1.43042921082341,0,0,0,0,0,0,0.611030144933625,0.296521128680622,0.123563938946503,0.104421949505455,0,0,0.234264445725339,1.094728735294,0.391329237864179,0.242780379534093,0,1.20990716048664,0,0.252746318513952,0,0,0,0,0,0,0.284609546029793,0,0,0.293977192243133,0.174118413160805,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.977756913674015,0.320635281006135,0.426905989478705,0,0.864542502924636,0,0,0,0,0.942776138467182,0.135904206073614,0,0.101998217636322,0,0,0.273810757783986,0,0,1.31443677139657,0,0.229160424011684,0,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.13480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| 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| ||
|short_description=p@chr6:35283957..35283963,+ | |||
}} | }} |
Latest revision as of 01:00, 31 July 2015
Short description: | p@chr6:35283957..35283963, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:35283957..35283963, + |
Coexpression cluster: | C1205_CD4_CD8_Natural_Whole_CD14_Peripheral_lung |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 5.07e-42 | 52 |
lymphocyte | 5.11e-41 | 53 |
common lymphoid progenitor | 5.11e-41 | 53 |
hematopoietic stem cell | 5.70e-41 | 168 |
hematopoietic oligopotent progenitor cell | 1.58e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.58e-38 | 161 |
hematopoietic cell | 6.04e-38 | 177 |
nongranular leukocyte | 1.91e-32 | 115 |
leukocyte | 2.37e-32 | 136 |
hematopoietic lineage restricted progenitor cell | 3.71e-27 | 120 |
T cell | 1.51e-25 | 25 |
pro-T cell | 1.51e-25 | 25 |
mature alpha-beta T cell | 1.40e-20 | 18 |
alpha-beta T cell | 1.40e-20 | 18 |
immature T cell | 1.40e-20 | 18 |
mature T cell | 1.40e-20 | 18 |
immature alpha-beta T cell | 1.40e-20 | 18 |
lymphocyte of B lineage | 5.96e-13 | 24 |
pro-B cell | 5.96e-13 | 24 |
CD8-positive, alpha-beta T cell | 3.91e-11 | 11 |
B cell | 2.06e-10 | 14 |
mesenchymal cell | 3.84e-10 | 354 |
connective tissue cell | 1.25e-09 | 361 |
CD4-positive, alpha-beta T cell | 1.63e-09 | 6 |
myeloid cell | 1.28e-08 | 108 |
common myeloid progenitor | 1.28e-08 | 108 |
natural killer cell | 5.80e-08 | 3 |
pro-NK cell | 5.80e-08 | 3 |
motile cell | 7.51e-08 | 386 |
single nucleate cell | 1.53e-07 | 3 |
mononuclear cell | 1.53e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 6.18e-09 | 371 |
blood | 3.19e-08 | 15 |
haemolymphatic fluid | 3.19e-08 | 15 |
organism substance | 3.19e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.21e-13 | 39 |
hematologic cancer | 5.96e-13 | 51 |
immune system cancer | 5.96e-13 | 51 |
myeloid leukemia | 1.20e-09 | 31 |