FFCP PHASE1:Hg19::chr7:121945005..121945046,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=1bp_to_ENST00000437317_5end | |association_with_transcript=1bp_to_ENST00000437317_5end | ||
|cluster_id=chr7:121945005..121945046,+ | |||
|coexpression_cluster_id=C90 | |||
|description=CAGE_peak_2_at_ENST00000437317_5end | |description=CAGE_peak_2_at_ENST00000437317_5end | ||
|id=chr7:121945005..121945046,+ | |id=chr7:121945005..121945046,+ | ||
|ontology_enrichment_celltype=CL:0000540!2.30e-12!6;CL:0000031!2.30e-12!6;CL:0000404!2.30e-12!6;CL:0002322!3.52e-11!5;CL:0000047!4.51e-09!8 | |ontology_enrichment_celltype=CL:0000540!2.30e-12!6;CL:0000031!2.30e-12!6;CL:0000404!2.30e-12!6;CL:0002322!3.52e-11!5;CL:0000047!4.51e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000333;3.83e-07;5 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.93e-15;2 | |||
|ontology_enrichment_disease=DOID:0050687!1.04e-17!143;DOID:162!7.63e-12!235;DOID:14566!2.54e-11!239;DOID:171!4.01e-11!10;DOID:305!1.77e-09!106;DOID:1115!2.40e-07!20 | |||
|ontology_enrichment_disease_v019=DOID:171;4.30e-27;10!DOID:3493;5.01e-16;2!DOID:3095;4.68e-12;22!DOID:2994;4.68e-12;22!DOID:3119;8.43e-09;14!DOID:5409;2.58e-08;4!DOID:3905;7.02e-08;9 | |||
|ontology_enrichment_disease_v019_2=DOID:171,3.85e-27,10;DOID:0050687,3.25e-17,143;DOID:3493,4.31e-16,2;DOID:3095,4.46e-12,22;DOID:2994,4.46e-12,22;DOID:162,3.75e-10,235;DOID:14566,7.35e-10,239;DOID:3119,8.10e-09,14;DOID:5409,2.88e-08,4;DOID:305,6.74e-08,106;DOID:3905,7.73e-08,9 | |||
|ontology_enrichment_uberon=UBERON:0001893!5.83e-16!34;UBERON:0001017!6.92e-16!82;UBERON:0002780!8.53e-16!41;UBERON:0001890!8.53e-16!41;UBERON:0006240!8.53e-16!41;UBERON:0001869!2.10e-15!32;UBERON:0003080!2.69e-15!42;UBERON:0000073!4.33e-15!94;UBERON:0001016!4.33e-15!94;UBERON:0002791!8.32e-15!33;UBERON:0005743!8.94e-15!86;UBERON:0002020!1.20e-12!34;UBERON:0003528!1.20e-12!34;UBERON:0002420!2.48e-11!9;UBERON:0007245!2.48e-11!9;UBERON:0010009!2.48e-11!9;UBERON:0010011!2.48e-11!9;UBERON:0000454!2.48e-11!9;UBERON:0001049!3.99e-11!57;UBERON:0005068!3.99e-11!57;UBERON:0006241!3.99e-11!57;UBERON:0007135!3.99e-11!57;UBERON:0009663!4.23e-11!7;UBERON:0002616!1.71e-10!59;UBERON:0002346!2.86e-10!90;UBERON:0000924!1.43e-09!173;UBERON:0006601!1.43e-09!173;UBERON:0000369!2.26e-09!4;UBERON:0002435!2.26e-09!4;UBERON:0000204!2.26e-09!4;UBERON:0010082!2.26e-09!4;UBERON:0000955!5.13e-09!69;UBERON:0006238!5.13e-09!69;UBERON:0003056!5.76e-09!61;UBERON:0002308!1.93e-08!9;UBERON:0000125!1.93e-08!9;UBERON:0005383!1.32e-07!3;UBERON:0005382!1.32e-07!3;UBERON:0002294!3.49e-07!7;UBERON:0001173!3.49e-07!7;UBERON:0004912!3.49e-07!7;UBERON:0004121!4.13e-07!169;UBERON:0003075!4.54e-07!86;UBERON:0007284!4.54e-07!86;UBERON:0000956!7.08e-07!25;UBERON:0000203!7.08e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002346;1.23e-30;4!UBERON:0000923;1.23e-30;4!UBERON:0010316;1.23e-30;4!UBERON:0005291;1.23e-30;4!UBERON:0002050;1.43e-24;5!UBERON:0005423;1.43e-24;5!UBERON:0001873;1.93e-15;2!UBERON:0005383;1.32e-10;3!UBERON:0005382;1.32e-10;3!UBERON:0009663;7.14e-10;7!UBERON:0004913;1.42e-08;1!UBERON:0003703;1.42e-08;1!UBERON:0001174;1.42e-08;1!UBERON:0004914;1.42e-08;1!UBERON:0000369;3.59e-08;4!UBERON:0002435;3.59e-08;4!UBERON:0000204;3.59e-08;4!UBERON:0002420;8.70e-08;9!UBERON:0000125;8.70e-08;9!UBERON:0007245;8.70e-08;9!UBERON:0002308;8.70e-08;9!UBERON:0010009;8.70e-08;9!UBERON:0010011;8.70e-08;9!UBERON:0000454;8.70e-08;9!UBERON:0000013;3.83e-07;5!UBERON:0002410;3.83e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001873,1.66e-15,2;UBERON:0010122,1.66e-15,2;UBERON:0005383,1.20e-10,3;UBERON:0005382,1.20e-10,3;UBERON:0009663,7.83e-10,7;UBERON:0004913,1.42e-08,1;UBERON:0003703,1.42e-08,1;UBERON:0001174,1.42e-08,1;UBERON:0004914,1.42e-08,1;UBERON:0000369,3.34e-08,4;UBERON:0002435,3.34e-08,4;UBERON:0000204,3.34e-08,4;UBERON:0010082,3.34e-08,4;UBERON:0002420,9.34e-08,9;UBERON:0000125,9.34e-08,9;UBERON:0007245,9.34e-08,9;UBERON:0002308,9.34e-08,9;UBERON:0010009,9.34e-08,9;UBERON:0010011,9.34e-08,9;UBERON:0000454,9.34e-08,9;UBERON:0000013,3.89e-07,5;UBERON:0002410,3.89e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.59035721985782,0.580969714347592,0.621966330092223,0.756962552626885,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42132431836989,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,10.3292426620253,0.511343412510774,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,4.13692047889758,13.9970214423962,4.16699987839901,1.77148277162768,1.32656082487949,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0.300646838828985,0.829505531177977,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.320635281006135,0.213452994739353,0,0.72045208577053,0,0,0,0.248505071130865,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.137539436597234,0.83088067605837,0,0,0.121499113316049,0,0,0,1.47840471127169,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0.988058159489721,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.537266523244462,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,13.5248709996071,0,22.2349614239773,38.6886354585063,1.73510069962603,17.3179924571706,0,0,0.80057074828547,0,0,0.449604575675217,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,1.65157612686837,0,0,0,0,0,0,0.40341013740704,0,0,0,1.47856086217045,0.135075169236789,0,0,0,0.546974809018219,0,0,2.63806866539431,1.02209942111676,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,1.89110145414349,0.556157009460346,0,0.471346769748006,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,2.94450700845729,2.68219434960993,0,0,0,0,0.935757853848423,0.397901550322736,0,2.93659813301296,0,1.20770274853339,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,1.43117993565528,0.821246550437305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,1.59035721985782,0.580969714347592,0.621966330092223,0.756962552626885,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.42132431836989,0,0,0,0,0,0,0,0,0.562677665642051,0,0,0,0,0,10.3292426620253,0.511343412510774,0,0,0.449341755736634,0.179021174675609,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0.254253650292766,0.236387681767936,4.13692047889758,13.9970214423962,4.16699987839901,1.77148277162768,1.32656082487949,0,0,0,0.219385397153973,0,0.41827123283581,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.782658475728359,0,0,0,0,0.063186579628488,0.300646838828985,0.829505531177977,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.320635281006135,0.213452994739353,0,0.72045208577053,0,0,0,0.248505071130865,0,0,0,0,0,1.20084057741958,0.410716136675979,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0.803765742325096,0.137539436597234,0.83088067605837,0,0,0.121499113316049,0,0,0,1.47840471127169,0,0,0,0,0,0,0,0,0,0,0,0.226624183040251,0,0,0,0,0,0,0.106787412567695,0,0,0,0.988058159489721,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151649117541648,0.285465333544967,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0.231522474323834,0,0.537266523244462,0,0,0,0,0,1.53744911152768,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368211900503681,0,0,0,0,13.5248709996071,0,22.2349614239773,38.6886354585063,1.73510069962603,17.3179924571706,0,0,0.80057074828547,0,0,0.449604575675217,0,0,0,0.252071696221718,0.0691572524642179,0,0,0,1.65157612686837,0,0,0,0,0,0,0.40341013740704,0,0,0,1.47856086217045,0.135075169236789,0,0,0,0.546974809018219,0,0,2.63806866539431,1.02209942111676,0,0,0,0.455324382702595,0,0,0,0,0.0657727735628491,1.89110145414349,0.556157009460346,0,0.471346769748006,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,2.94450700845729,2.68219434960993,0,0,0,0,0.935757853848423,0.397901550322736,0,2.93659813301296,0,1.20770274853339,0,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0,0,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.718601616852695,0,0,0,0,0,0 | ||
|short_description=p2@ENST00000437317 | |short_description=p2@ENST00000437317 | ||
}} | }} |
Latest revision as of 05:32, 31 July 2015
Short description: | p2@ENST00000437317 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000437317_5end |
Coexpression cluster: | C90_neuroectodermal_peripheral_neuroepithelioma_neuroblastoma_carcinoid_parietal_putamen |
Association with transcript: | 1bp_to_ENST00000437317_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
caudate nucleus | 1.66e-15 | 2 |
future caudate nucleus | 1.66e-15 | 2 |
caudate-putamen | 1.20e-10 | 3 |
dorsal striatum | 1.20e-10 | 3 |
telencephalic nucleus | 7.83e-10 | 7 |
hepatopancreatic ampulla | 1.42e-08 | 1 |
extrahepatic bile duct | 1.42e-08 | 1 |
common bile duct | 1.42e-08 | 1 |
duodenal papilla | 1.42e-08 | 1 |
corpus striatum | 3.34e-08 | 4 |
striatum | 3.34e-08 | 4 |
ventral part of telencephalon | 3.34e-08 | 4 |
future corpus striatum | 3.34e-08 | 4 |
basal ganglion | 9.34e-08 | 9 |
neural nucleus | 9.34e-08 | 9 |
nuclear complex of neuraxis | 9.34e-08 | 9 |
nucleus of brain | 9.34e-08 | 9 |
aggregate regional part of brain | 9.34e-08 | 9 |
collection of basal ganglia | 9.34e-08 | 9 |
cerebral subcortex | 9.34e-08 | 9 |
sympathetic nervous system | 3.89e-07 | 5 |
autonomic nervous system | 3.89e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 3.85e-27 | 10 |
cell type cancer | 3.25e-17 | 143 |
signet ring cell adenocarcinoma | 4.31e-16 | 2 |
germ cell and embryonal cancer | 4.46e-12 | 22 |
germ cell cancer | 4.46e-12 | 22 |
cancer | 3.75e-10 | 235 |
disease of cellular proliferation | 7.35e-10 | 239 |
gastrointestinal system cancer | 8.10e-09 | 14 |
lung small cell carcinoma | 2.88e-08 | 4 |
carcinoma | 6.74e-08 | 106 |
lung carcinoma | 7.73e-08 | 9 |