FFCP PHASE1:Hg19::chr7:128503395..128503414,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:128503395..128503414,+
|short_description=p@chr7:128503395..128503414,+
|description=CAGE_peak_at_chr7:128503395..128503414,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:128503395..128503414,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr7:128503395..128503414,+ | |||
|id=chr7:128503395..128503414,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.58e-56!76;CL:0000557!4.60e-55!71;CL:0002009!1.03e-53!65;CL:0000738!1.55e-53!140;CL:0000839!6.82e-52!70;CL:0002194!1.21e-51!63;CL:0000576!1.21e-51!63;CL:0000040!1.21e-51!63;CL:0000559!1.21e-51!63;CL:0002057!8.44e-49!42;CL:0002031!4.07e-45!124;CL:0002087!4.35e-45!119;CL:0000037!1.32e-44!172;CL:0000566!1.32e-44!172;CL:0000860!2.59e-44!45;CL:0000763!4.72e-41!112;CL:0000049!4.72e-41!112;CL:0000988!3.29e-40!182;CL:0002032!3.34e-40!165;CL:0000837!3.34e-40!165;CL:0000219!3.10e-18!390;CL:0000134!6.04e-18!358;CL:0002320!6.83e-17!365;CL:0000048!5.43e-12!430;CL:0000034!2.19e-11!444;CL:0000723!2.45e-11!436;CL:0002393!5.93e-11!9;CL:0002397!5.93e-11!9;CL:0000451!2.79e-07!10;CL:0000840!3.22e-07!5;CL:0001029!3.22e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.45e-71;33!CL:0002057;9.45e-71;33!CL:0000473;3.61e-65;39!CL:0000234;3.61e-65;39!CL:0000576;3.09e-62;48!CL:0000766;1.20e-45;69!CL:0002087;1.51e-22;104!CL:0000738;3.19e-21;136!CL:0000763;5.32e-21;100!CL:0002393;1.93e-15;6!CL:0002397;1.93e-15;6!CL:0000840;1.04e-13;5!CL:0000451;2.77e-12;10!CL:0000988;6.28e-12;177!CL:0000235;6.20e-10;6!CL:0000219;1.43e-09;193!CL:0000990;6.50e-09;8!CL:0000767;8.73e-09;3!CL:0000094;4.15e-08;8!CL:0000875;6.91e-08;3!CL:0002396;6.91e-08;3!CL:0000623;8.92e-08;3!CL:0000226;1.30e-07;3!CL:0000842;1.30e-07;3!CL:0002619;2.37e-07;3!CL:0000784;3.21e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.47e-116,72;CL:0002009,2.35e-115,61;CL:0000557,1.15e-111,67;CL:0002194,7.25e-111,59;CL:0000576,7.25e-111,59;CL:0000040,7.25e-111,59;CL:0000559,7.25e-111,59;CL:0000473,2.21e-107,48;CL:0000234,2.21e-107,48;CL:0000839,2.21e-105,66;CL:0000860,7.15e-99,42;CL:0002057,7.15e-99,42;CL:0000738,1.47e-95,136;CL:0002087,3.77e-82,115;CL:0002031,1.05e-80,120;CL:0000763,7.43e-78,108;CL:0000049,7.43e-78,108;CL:0000037,3.43e-74,168;CL:0000988,1.46e-69,177;CL:0002032,4.14e-67,161;CL:0000837,4.14e-67,161;CL:0000134,3.57e-27,354;CL:0002320,2.62e-26,361;CL:0000219,2.96e-23,386;CL:0002393,1.20e-21,9;CL:0002397,1.20e-21,9;CL:0000048,1.60e-19,427;CL:0000034,3.03e-19,441;CL:0000723,5.24e-19,433;CL:0000840,1.15e-13,5;CL:0001029,1.15e-13,5;CL:0000451,2.96e-12,10;CL:0000235,6.46e-10,6;CL:0000990,6.91e-09,8;CL:0000767,8.62e-09,3;CL:0000094,4.15e-08,8;CL:0000875,6.50e-08,3;CL:0002396,6.50e-08,3;CL:0000623,9.15e-08,3;CL:0000825,9.15e-08,3;CL:0000226,1.38e-07,3;CL:0000842,1.38e-07,3;CL:0002619,2.32e-07,3;CL:0000784,3.21e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.54e-70;42!CL:0000049;1.56e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.44e-51!80;UBERON:0001474!2.83e-47!86;UBERON:0002390!1.59e-41!102;UBERON:0003061!1.59e-41!102;UBERON:0002193!7.39e-39!112;UBERON:0004765!6.83e-38!101;UBERON:0001434!6.83e-38!101;UBERON:0002405!4.88e-33!115;UBERON:0002384!4.17e-17!375;UBERON:0002204!8.25e-17!167;UBERON:0003081!1.50e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.99e-97,76;UBERON:0001474,1.02e-88,82;UBERON:0002390,2.48e-80,98;UBERON:0003061,2.48e-80,98;UBERON:0004765,1.42e-79,90;UBERON:0002405,1.51e-76,93;UBERON:0002193,1.61e-71,108;UBERON:0001434,3.49e-70,100;UBERON:0002204,3.81e-36,167;UBERON:0003081,3.16e-32,203;UBERON:0002384,4.27e-26,371;UBERON:0000926,2.36e-15,315;UBERON:0004120,2.36e-15,315;UBERON:0006603,2.36e-15,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,33.8293278090057,20.3429580991523,29.7246956766866,0,0,0,0.0774672005803016,0,0.587200878669695,37.1176923716358,28.4773115407601,20.1820109765742,2.68698569087909,1.6194683300949,1.03030227053675,11.341062624806,17.3822934096852,12.1292030593908,42.9993718275517,52.6294896667937,82.6916010289927,57.8261708567522,55.3307126102857,100.504947702649,129.279630276232,123.933059248095,163.866048779154,20.7066573496865,34.3861749072886,38.8771628089996,74.6844697385002,85.0461921751648,58.8190155735118,11.5447955065351,22.9383206264877,19.6063385245039,42.6607580784018,38.0148100543064,33.632401445761,64.8221556362398,53.7127405972807,114.241332314891,23.005181100068,60.3975323019606,61.0772407760907,11.4077854608449,16.3705310973084,10.6925909209272,2.3589012540764,1.20141514273205,0.64290234678832,4.84521664360123,3.38158351238453,3.65328307529268,0,0,0,0.853460445133014,0,0,0.661044872784862,0,10.2458334439701,8.22132065119314,12.2327433000073,0,12.8916969485753,0,0.196709770113833,1.96505381374582,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0,0,0.236777252044017,0,2.41928091869679,1.60464117470104,2.02754165435919,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,2.27183175558278,4.17911369518241,2.39324328933957,1.43094374583205,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,19.3890132074163,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,1.40402559083543,2.22946743433092,0,0,0,0,0,0,0,0.44024217006613,1.86595303986695,0.864719720501769,1.8936365013957,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,6.08118903205952,5.52482800575339,12.6500363689819,0,0,0,0,0,0,0,3.15249216323084,2.37190332345469,3.08023287071396,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,5.39285502046542,2.13455115606889,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,8.51182150013745,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.533937062838473,0,2.89967338743037,0,0,0,0,0.544017803369474,0,0.612691153526923,0.655745261419609,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0.124980407962107,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0.473328002922261,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,33.8293278090057,20.3429580991523,29.7246956766866,0,0,0,0.0774672005803016,0,0.587200878669695,37.1176923716358,28.4773115407601,20.1820109765742,2.68698569087909,1.6194683300949,1.03030227053675,11.341062624806,17.3822934096852,12.1292030593908,42.9993718275517,52.6294896667937,82.6916010289927,57.8261708567522,55.3307126102857,100.504947702649,129.279630276232,123.933059248095,163.866048779154,20.7066573496865,34.3861749072886,38.8771628089996,74.6844697385002,85.0461921751648,58.8190155735118,11.5447955065351,22.9383206264877,19.6063385245039,42.6607580784018,38.0148100543064,33.632401445761,64.8221556362398,53.7127405972807,114.241332314891,23.005181100068,60.3975323019606,61.0772407760907,11.4077854608449,16.3705310973084,10.6925909209272,2.3589012540764,1.20141514273205,0.64290234678832,4.84521664360123,3.38158351238453,3.65328307529268,0,0,0,0.853460445133014,0,0,0.661044872784862,0,10.2458334439701,8.22132065119314,12.2327433000073,0,12.8916969485753,0,0.196709770113833,1.96505381374582,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318565414324097,0,0,0.752875595388864,0,0,0.236777252044017,0,2.41928091869679,1.60464117470104,2.02754165435919,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,2.27183175558278,4.17911369518241,2.39324328933957,1.43094374583205,1.71598473234038,1.11437250398869,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,19.3890132074163,0,0,0,0.264818361626438,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0.144366447761074,0,0,0,0,0.984868024349589,1.40402559083543,2.22946743433092,0,0,0,0,0,0,0,0.44024217006613,1.86595303986695,0.864719720501769,1.8936365013957,0.190493682876507,0.381988425558278,0,0,0.205654985406647,0.600686115687835,0,0,0,0,0.517086863031111,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,6.08118903205952,5.52482800575339,12.6500363689819,0,0,0,0,0,0,0,3.15249216323084,2.37190332345469,3.08023287071396,0.254094624222463,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,1.44737618286021,5.39285502046542,2.13455115606889,0.606255142892519,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0.0821271560138091,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0.328014645699706,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0.633322905892992,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0.199579371432817,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0.500547425135725,0,0,0,0,0,0,0.18714054040822,1.02555725490326,0,0,0,0,0.296964680832639,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183195186803725,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0,0.242780379534093,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0.600420288709789,0,0,0,0,0,0.229160424011684,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,2.0247650239635,8.51182150013745,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0.542999601753713,0,0,0,0.082092520749339,0,0,0,0,0,0,0.171086837884329,0,0.533937062838473,0,2.89967338743037,0,0,0,0,0.544017803369474,0,0.612691153526923,0.655745261419609,0,0,0,0,0.573409195690071,0,0.124192805882767,0,0.124980407962107,0.606596470166591,0.570930667089935,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0,0,0.449803112163605,0,0,0.265841714557995,0,0,0,0,0.181848659202559,0,0.464033759878494,0,0,0.343395705182793,0,0,0,0.214441591374926,0,0,0.231522474323834,0.244736704506468,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,1.24415452006595,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.150420656698515,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0.0657727735628491,0,0.111231401892069,0,0,0.280272163313789,0,0,0,0.142953088353313,0,0,0,0,0.414432328326074,0,0,0,0.473328002922261,0.340853619036631,0,0,0.31020638566432,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0.655678681511872,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,0,0,0,0.126166424835079,0,0.126698501011437,0,0,0,0,0,0.267964130156178,0,0,0.213233981900981,0,0,0.186224142887574,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr7:128503395..128503414,+ | |||
}} | }} |
Latest revision as of 05:50, 31 July 2015
Short description: | p@chr7:128503395..128503414, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:128503395..128503414, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.99e-97 | 76 |
bone element | 1.02e-88 | 82 |
hematopoietic system | 2.48e-80 | 98 |
blood island | 2.48e-80 | 98 |
skeletal element | 1.42e-79 | 90 |
immune system | 1.51e-76 | 93 |
hemolymphoid system | 1.61e-71 | 108 |
skeletal system | 3.49e-70 | 100 |
musculoskeletal system | 3.81e-36 | 167 |
lateral plate mesoderm | 3.16e-32 | 203 |
connective tissue | 4.27e-26 | 371 |
mesoderm | 2.36e-15 | 315 |
mesoderm-derived structure | 2.36e-15 | 315 |
presumptive mesoderm | 2.36e-15 | 315 |