FFCP PHASE1:Hg19::chr7:643123..643163,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr7:643123..643163,+ | |||
|coexpression_cluster_id=C4692 | |||
|description=CAGE_peak_at_chr7:643123..643163,+ | |description=CAGE_peak_at_chr7:643123..643163,+ | ||
|id=chr7:643123..643163,+ | |id=chr7:643123..643163,+ | ||
|ontology_enrichment_celltype=CL:0000763!1.31e-40!112;CL:0000049!1.31e-40!112;CL:0000988!3.41e-39!182;CL:0002032!4.00e-35!165;CL:0000837!4.00e-35!165;CL:0000037!1.26e-33!172;CL:0000566!1.26e-33!172;CL:0000557!1.32e-33!71;CL:0002194!1.82e-33!63;CL:0000576!1.82e-33!63;CL:0000040!1.82e-33!63;CL:0000559!1.82e-33!63;CL:0002009!1.95e-33!65;CL:0000839!7.40e-33!70;CL:0002057!2.13e-31!42;CL:0000766!2.63e-30!76;CL:0000860!2.06e-28!45;CL:0002031!3.87e-25!124;CL:0002087!6.87e-24!119;CL:0000738!2.12e-23!140;CL:0002320!4.68e-10!365;CL:0000134!6.75e-10!358;CL:0000219!3.22e-08!390;CL:0000048!2.87e-07!430;CL:0000034!7.24e-07!444;CL:0000723!8.11e-07!436 | |ontology_enrichment_celltype=CL:0000763!1.31e-40!112;CL:0000049!1.31e-40!112;CL:0000988!3.41e-39!182;CL:0002032!4.00e-35!165;CL:0000837!4.00e-35!165;CL:0000037!1.26e-33!172;CL:0000566!1.26e-33!172;CL:0000557!1.32e-33!71;CL:0002194!1.82e-33!63;CL:0000576!1.82e-33!63;CL:0000040!1.82e-33!63;CL:0000559!1.82e-33!63;CL:0002009!1.95e-33!65;CL:0000839!7.40e-33!70;CL:0002057!2.13e-31!42;CL:0000766!2.63e-30!76;CL:0000860!2.06e-28!45;CL:0002031!3.87e-25!124;CL:0002087!6.87e-24!119;CL:0000738!2.12e-23!140;CL:0002320!4.68e-10!365;CL:0000134!6.75e-10!358;CL:0000219!3.22e-08!390;CL:0000048!2.87e-07!430;CL:0000034!7.24e-07!444;CL:0000723!8.11e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0000473;8.02e-61;39!CL:0000234;8.02e-61;39!CL:0000860;8.94e-61;33!CL:0002057;8.94e-61;33!CL:0000576;4.41e-31;48!CL:0000766;1.01e-21;69!CL:0000763;7.52e-14;100!CL:0000235;9.29e-13;6!CL:0002087;4.37e-12;104!CL:0000738;2.58e-10;136!CL:0000988;1.77e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.95e-66,59;CL:0000576,3.95e-66,59;CL:0000040,3.95e-66,59;CL:0000559,3.95e-66,59;CL:0002009,1.14e-63,61;CL:0000473,8.95e-63,48;CL:0000234,8.95e-63,48;CL:0000839,3.68e-58,66;CL:0000557,3.72e-57,67;CL:0000766,1.51e-52,72;CL:0000860,1.27e-51,42;CL:0002057,1.27e-51,42;CL:0000763,5.56e-45,108;CL:0000049,5.56e-45,108;CL:0002087,3.94e-44,115;CL:0002031,7.79e-42,120;CL:0000988,8.08e-40,177;CL:0002032,9.39e-39,161;CL:0000837,9.39e-39,161;CL:0000037,1.23e-36,168;CL:0000738,1.28e-35,136;CL:0000134,3.49e-14,354;CL:0002320,1.15e-13,361;CL:0000235,1.34e-12,6;CL:0000219,7.76e-12,386;CL:0000048,1.07e-11,427;CL:0000723,2.36e-11,433;CL:0000034,6.56e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-39;42!CL:0000049;2.75e-16;108 | |||
|ontology_enrichment_disease=DOID:1240!2.71e-14!39;DOID:8692!1.35e-13!31;DOID:2531!4.20e-12!51;DOID:0060083!4.20e-12!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.19e-29!80;UBERON:0002193!7.37e-28!112;UBERON:0002390!3.22e-26!102;UBERON:0003061!3.22e-26!102;UBERON:0001474!6.04e-26!86;UBERON:0002405!7.09e-24!115;UBERON:0004765!2.37e-21!101;UBERON:0001434!2.37e-21!101;UBERON:0003081!5.15e-11!216;UBERON:0002204!2.58e-10!167;UBERON:0002384!7.07e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-49,76;UBERON:0002405,2.38e-48,93;UBERON:0002193,9.39e-48,108;UBERON:0002390,3.93e-46,98;UBERON:0003061,3.93e-46,98;UBERON:0001474,5.34e-45,82;UBERON:0004765,3.70e-40,90;UBERON:0001434,3.44e-35,100;UBERON:0003081,5.08e-18,203;UBERON:0002204,3.00e-17,167;UBERON:0002384,5.90e-13,371;UBERON:0000926,2.95e-09,315;UBERON:0004120,2.95e-09,315;UBERON:0006603,2.95e-09,315 | |||
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| ||
|short_description=p@chr7:643123..643163,+ | |short_description=p@chr7:643123..643163,+ | ||
}} | }} |
Latest revision as of 11:05, 31 July 2015
Short description: | p@chr7:643123..643163, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:643123..643163, + |
Coexpression cluster: | C4692_anaplastic_cord_Dendritic_hairy_chronic_CD14_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.95e-66 | 59 |
monocyte | 3.95e-66 | 59 |
monoblast | 3.95e-66 | 59 |
promonocyte | 3.95e-66 | 59 |
macrophage dendritic cell progenitor | 1.14e-63 | 61 |
defensive cell | 8.95e-63 | 48 |
phagocyte | 8.95e-63 | 48 |
myeloid lineage restricted progenitor cell | 3.68e-58 | 66 |
granulocyte monocyte progenitor cell | 3.72e-57 | 67 |
myeloid leukocyte | 1.51e-52 | 72 |
classical monocyte | 1.27e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-51 | 42 |
myeloid cell | 5.56e-45 | 108 |
common myeloid progenitor | 5.56e-45 | 108 |
nongranular leukocyte | 3.94e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 7.79e-42 | 120 |
hematopoietic cell | 8.08e-40 | 177 |
hematopoietic oligopotent progenitor cell | 9.39e-39 | 161 |
hematopoietic multipotent progenitor cell | 9.39e-39 | 161 |
hematopoietic stem cell | 1.23e-36 | 168 |
leukocyte | 1.28e-35 | 136 |
mesenchymal cell | 3.49e-14 | 354 |
connective tissue cell | 1.15e-13 | 361 |
macrophage | 1.34e-12 | 6 |
motile cell | 7.76e-12 | 386 |
multi fate stem cell | 1.07e-11 | 427 |
somatic stem cell | 2.36e-11 | 433 |
stem cell | 6.56e-11 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.72e-49 | 76 |
immune system | 2.38e-48 | 93 |
hemolymphoid system | 9.39e-48 | 108 |
hematopoietic system | 3.93e-46 | 98 |
blood island | 3.93e-46 | 98 |
bone element | 5.34e-45 | 82 |
skeletal element | 3.70e-40 | 90 |
skeletal system | 3.44e-35 | 100 |
lateral plate mesoderm | 5.08e-18 | 203 |
musculoskeletal system | 3.00e-17 | 167 |
connective tissue | 5.90e-13 | 371 |
mesoderm | 2.95e-09 | 315 |
mesoderm-derived structure | 2.95e-09 | 315 |
presumptive mesoderm | 2.95e-09 | 315 |