FFCP PHASE1:Hg19::chr7:643123..643163,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:643123..643163,+ to FFCP PHASE1:Hg19::chr7:643123..643163,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr7:643123..643163,+ | |||
|coexpression_cluster_id=C4692 | |||
|description=CAGE_peak_at_chr7:643123..643163,+ | |||
|id=chr7:643123..643163,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.31e-40!112;CL:0000049!1.31e-40!112;CL:0000988!3.41e-39!182;CL:0002032!4.00e-35!165;CL:0000837!4.00e-35!165;CL:0000037!1.26e-33!172;CL:0000566!1.26e-33!172;CL:0000557!1.32e-33!71;CL:0002194!1.82e-33!63;CL:0000576!1.82e-33!63;CL:0000040!1.82e-33!63;CL:0000559!1.82e-33!63;CL:0002009!1.95e-33!65;CL:0000839!7.40e-33!70;CL:0002057!2.13e-31!42;CL:0000766!2.63e-30!76;CL:0000860!2.06e-28!45;CL:0002031!3.87e-25!124;CL:0002087!6.87e-24!119;CL:0000738!2.12e-23!140;CL:0002320!4.68e-10!365;CL:0000134!6.75e-10!358;CL:0000219!3.22e-08!390;CL:0000048!2.87e-07!430;CL:0000034!7.24e-07!444;CL:0000723!8.11e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000473;8.02e-61;39!CL:0000234;8.02e-61;39!CL:0000860;8.94e-61;33!CL:0002057;8.94e-61;33!CL:0000576;4.41e-31;48!CL:0000766;1.01e-21;69!CL:0000763;7.52e-14;100!CL:0000235;9.29e-13;6!CL:0002087;4.37e-12;104!CL:0000738;2.58e-10;136!CL:0000988;1.77e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,3.95e-66,59;CL:0000576,3.95e-66,59;CL:0000040,3.95e-66,59;CL:0000559,3.95e-66,59;CL:0002009,1.14e-63,61;CL:0000473,8.95e-63,48;CL:0000234,8.95e-63,48;CL:0000839,3.68e-58,66;CL:0000557,3.72e-57,67;CL:0000766,1.51e-52,72;CL:0000860,1.27e-51,42;CL:0002057,1.27e-51,42;CL:0000763,5.56e-45,108;CL:0000049,5.56e-45,108;CL:0002087,3.94e-44,115;CL:0002031,7.79e-42,120;CL:0000988,8.08e-40,177;CL:0002032,9.39e-39,161;CL:0000837,9.39e-39,161;CL:0000037,1.23e-36,168;CL:0000738,1.28e-35,136;CL:0000134,3.49e-14,354;CL:0002320,1.15e-13,361;CL:0000235,1.34e-12,6;CL:0000219,7.76e-12,386;CL:0000048,1.07e-11,427;CL:0000723,2.36e-11,433;CL:0000034,6.56e-11,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.27e-39;42!CL:0000049;2.75e-16;108 | |||
|ontology_enrichment_disease=DOID:1240!2.71e-14!39;DOID:8692!1.35e-13!31;DOID:2531!4.20e-12!51;DOID:0060083!4.20e-12!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.19e-29!80;UBERON:0002193!7.37e-28!112;UBERON:0002390!3.22e-26!102;UBERON:0003061!3.22e-26!102;UBERON:0001474!6.04e-26!86;UBERON:0002405!7.09e-24!115;UBERON:0004765!2.37e-21!101;UBERON:0001434!2.37e-21!101;UBERON:0003081!5.15e-11!216;UBERON:0002204!2.58e-10!167;UBERON:0002384!7.07e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-49,76;UBERON:0002405,2.38e-48,93;UBERON:0002193,9.39e-48,108;UBERON:0002390,3.93e-46,98;UBERON:0003061,3.93e-46,98;UBERON:0001474,5.34e-45,82;UBERON:0004765,3.70e-40,90;UBERON:0001434,3.44e-35,100;UBERON:0003081,5.08e-18,203;UBERON:0002204,3.00e-17,167;UBERON:0002384,5.90e-13,371;UBERON:0000926,2.95e-09,315;UBERON:0004120,2.95e-09,315;UBERON:0006603,2.95e-09,315 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.730310090387373,0,0,0,0,0,0,0,1.83392173795083,1.72411237844886,2.2826126580967,0,0,0,0,0,0,0,0.142169232487422,0.587200878669695,0.553995408531877,0,0,0,0,0,1.59938062657521,1.51150377475524,0.970336244751265,1.85943229524548,2.87817521615278,4.64559556342655,5.75384784644301,5.12321413058201,5.20260905754887,3.44745680736619,5.80936215225443,2.70852973188684,1.88242339542605,1.91034305040492,1.12361742222542,2.14258724659632,2.24650318953266,2.55734850319616,2.30895910130701,1.99463657621632,2.98357325372886,2.32167390902867,1.70215567407342,0.622822248995575,4.01997864410789,6.77927793946262,4.77815458351257,1.81619850790011,2.94622108790052,1.58231193720442,0,0.212604299965044,0.209658645508376,0,0.150176892841506,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0.167186495390678,0,0,0,0.668462741311041,0,0,0,0.25618263945135,0.780356085359269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821127996921047,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,4.54366351116557,5.22389211897802,10.9025527625469,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150238058906597,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,2.80483547606892,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,1.58803092537181,1.38895653772983,2.09279567458058,0,0,1.23108503043699,2.57404691653161,1.48631162288728,0,0,0,0,0,0,0,0.176096868026452,0,0.720599767084807,0.37872730027914,0,0,0,0,0,0,0,0.224262168690721,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86495122564762,2.00902836572851,0,0.239624855491583,0,0,0,0,0,3.36255431980582,0,0,0.128343036279748,0,0,0,0,0,0,0,0.414415513436035,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0.170093705276516,0,0,0.270946437543853,0.501689773854853,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0.286249773483982,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.7133421029625,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0.59873811429845,0.957526850661834,0.846694330895531,0,2.52717460302113,2.73881614839831,0.783399478865116,0,0.50787533340481,0.963528450622197,0.201799707191048,0,0,1.22896305723383,0.671028323677248,1.50164227540718,0,4.73290495621912,0,0,0,0,0,0.293016358543788,0,0.111443384277478,0,0,0,0,0,0.140669416410513,0,17.3044067938098,0,0,0,0,0,0.123084805461069,0,0,0,1.02314474045374,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,1.52581736317083,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.3025784604418,0.332423363800313,0.902382642468723,0.588187602953219,1.34257269580674,0.189753732724185,0.158936578980379,0,0,0,0,0,0,0,15.715619820073,18.0403350861894,16.7075119208729,0.134802265961354,0,0.234264445725339,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0.313932918407225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0.104602846312333,0,0,1.20084057741958,0,0,0,11.0412688797312,0,0,0.717873024576814,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0.157611414598396,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0.113312091520126,0,0,0.258565912723101,0.26446520348538,0,0,0.854299300541557,0,1.65695622138878,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0,0,0.443716206147409,0.124192805882767,0,0.124980407962107,3.1846314683746,0,0.941063278792687,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797525143673985,0,0,0,0,0.181848659202559,0,0,0,1.20008329398946,0,0,1.26184898228651,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0.327130788511688,0,0,0,0.39997479170986,0.533458648470704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0.921871900446234,0,0.0679697329768317,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0.392616934229891,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0.252332849670158,0,0,0,0,0,0,0,0.267964130156178,0,0.20686599172379,0,0,0,0,0,0,0,0.217716747896961,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,2.56454793842586 | ||
|short_description=p@chr7:643123..643163,+ | |||
}} | }} |
Latest revision as of 11:05, 31 July 2015
Short description: | p@chr7:643123..643163, + |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:643123..643163, + |
Coexpression cluster: | C4692_anaplastic_cord_Dendritic_hairy_chronic_CD14_acute |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 3.95e-66 | 59 |
monocyte | 3.95e-66 | 59 |
monoblast | 3.95e-66 | 59 |
promonocyte | 3.95e-66 | 59 |
macrophage dendritic cell progenitor | 1.14e-63 | 61 |
defensive cell | 8.95e-63 | 48 |
phagocyte | 8.95e-63 | 48 |
myeloid lineage restricted progenitor cell | 3.68e-58 | 66 |
granulocyte monocyte progenitor cell | 3.72e-57 | 67 |
myeloid leukocyte | 1.51e-52 | 72 |
classical monocyte | 1.27e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.27e-51 | 42 |
myeloid cell | 5.56e-45 | 108 |
common myeloid progenitor | 5.56e-45 | 108 |
nongranular leukocyte | 3.94e-44 | 115 |
hematopoietic lineage restricted progenitor cell | 7.79e-42 | 120 |
hematopoietic cell | 8.08e-40 | 177 |
hematopoietic oligopotent progenitor cell | 9.39e-39 | 161 |
hematopoietic multipotent progenitor cell | 9.39e-39 | 161 |
hematopoietic stem cell | 1.23e-36 | 168 |
leukocyte | 1.28e-35 | 136 |
mesenchymal cell | 3.49e-14 | 354 |
connective tissue cell | 1.15e-13 | 361 |
macrophage | 1.34e-12 | 6 |
motile cell | 7.76e-12 | 386 |
multi fate stem cell | 1.07e-11 | 427 |
somatic stem cell | 2.36e-11 | 433 |
stem cell | 6.56e-11 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.72e-49 | 76 |
immune system | 2.38e-48 | 93 |
hemolymphoid system | 9.39e-48 | 108 |
hematopoietic system | 3.93e-46 | 98 |
blood island | 3.93e-46 | 98 |
bone element | 5.34e-45 | 82 |
skeletal element | 3.70e-40 | 90 |
skeletal system | 3.44e-35 | 100 |
lateral plate mesoderm | 5.08e-18 | 203 |
musculoskeletal system | 3.00e-17 | 167 |
connective tissue | 5.90e-13 | 371 |
mesoderm | 2.95e-09 | 315 |
mesoderm-derived structure | 2.95e-09 | 315 |
presumptive mesoderm | 2.95e-09 | 315 |