FFCP PHASE1:Hg19::chr7:989392..989403,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:989392..989403,- | |||
|description=CAGE_peak_at_chr7:989392..989403,- | |||
|id=chr7:989392..989403,- | |||
|ontology_enrichment_celltype=CL:0001014!4.31e-16!2;CL:0001016!4.31e-16!2;CL:0000453!5.23e-14!5;CL:0000066!4.02e-09!254;CL:0000313!4.52e-09!1;CL:1001319!2.06e-08!1;CL:1000600!2.06e-08!1;CL:0000990!5.27e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000313;6.72e-26;1!CL:0000159;1.14e-13;2!CL:0000082;2.19e-12;19!CL:0000322;1.47e-09;3!CL:0000244;1.75e-07;4!CL:0000731;1.75e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,7.62e-26,1;CL:0000159,1.21e-13,2;CL:0000082,2.33e-12,19;CL:0000322,1.81e-09,3;CL:0000244,1.59e-07,4;CL:0000731,1.59e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.42e-08;29!UBERON:0001041;4.38e-08;30 | |||
|ontology_enrichment_disease=DOID:305!7.66e-22!106;DOID:1749!1.64e-18!14;DOID:3493!3.44e-16!2;DOID:0050687!2.84e-15!143;DOID:299!3.22e-14!25;DOID:2152!4.52e-09!1;DOID:3111!5.70e-09!1;DOID:3603!5.70e-09!1;DOID:162!7.62e-08!235;DOID:14566!1.32e-07!239;DOID:3908!4.25e-07!5 | |||
|ontology_enrichment_disease_v019=DOID:2152;6.72e-26;1!DOID:3908;1.10e-20;5!DOID:299;2.29e-16;25!DOID:1324;1.72e-15;15!DOID:0050615;1.43e-14;16!DOID:4468;6.85e-14;2!DOID:3910;1.14e-13;2!DOID:3493;1.14e-13;2!DOID:3905;5.83e-12;9!DOID:4556;1.47e-09;3!DOID:305;3.06e-08;106!DOID:1749;5.00e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2152,7.62e-26,1;DOID:3908,1.10e-20,5;DOID:299,2.29e-16,25;DOID:1324,1.85e-15,15;DOID:0050615,1.53e-14,16;DOID:4468,6.43e-14,2;DOID:3493,1.07e-13,2;DOID:3910,1.55e-13,2;DOID:3905,5.83e-12,9;DOID:305,1.80e-11,106;DOID:4556,1.19e-09,3;DOID:0050687,1.72e-08,143;DOID:1749,4.82e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002394!2.30e-17!4;UBERON:0003928!2.30e-17!4;UBERON:0002294!3.71e-10!7;UBERON:0001173!3.71e-10!7;UBERON:0004912!3.71e-10!7;UBERON:0000344!6.98e-10!12;UBERON:0004911!4.52e-09!1;UBERON:0004913!7.75e-09!1;UBERON:0003703!7.75e-09!1;UBERON:0001174!7.75e-09!1;UBERON:0004914!7.75e-09!1;UBERON:0000997!1.91e-08!1;UBERON:0005056!1.91e-08!1;UBERON:0004645!2.06e-08!1;UBERON:0001256!2.06e-08!1;UBERON:0001259!2.06e-08!1;UBERON:0003343!4.15e-08!4;UBERON:0004785!4.15e-08!4;UBERON:0000365!7.48e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0004911;6.72e-26;1!UBERON:0004903;1.14e-13;2!UBERON:0004909;1.14e-13;2!UBERON:0002173;1.14e-13;2!UBERON:0002186;1.14e-13;2!UBERON:0004802;2.19e-12;19!UBERON:0000115;2.19e-12;19!UBERON:0002048;8.62e-11;22!UBERON:0004807;8.62e-11;22!UBERON:0000117;8.62e-11;22!UBERON:0000171;8.62e-11;22!UBERON:0000170;8.62e-11;22!UBERON:0005911;1.86e-10;36!UBERON:0004821;1.47e-09;3!UBERON:0007499;1.47e-09;3!UBERON:0003215;1.47e-09;3!UBERON:0010368;1.47e-09;3!UBERON:0009911;1.47e-09;3!UBERON:0002299;1.47e-09;3!UBERON:0006524;1.47e-09;3!UBERON:0008874;1.47e-09;3!UBERON:0002169;1.47e-09;3!UBERON:0004894;1.47e-09;3!UBERON:0009856;1.75e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004911,7.62e-26,1;UBERON:0004909,1.21e-13,2;UBERON:0004903,1.55e-13,2;UBERON:0002173,1.55e-13,2;UBERON:0002186,1.55e-13,2;UBERON:0004802,2.33e-12,19;UBERON:0000115,2.33e-12,19;UBERON:0002048,9.07e-11,22;UBERON:0000117,9.07e-11,22;UBERON:0000171,9.07e-11,22;UBERON:0000170,9.07e-11,22;UBERON:0005597,9.07e-11,22;UBERON:0000118,9.07e-11,22;UBERON:0004821,1.81e-09,3;UBERON:0003215,1.81e-09,3;UBERON:0010368,1.81e-09,3;UBERON:0009911,1.81e-09,3;UBERON:0002299,1.81e-09,3;UBERON:0006524,1.81e-09,3;UBERON:0008874,1.81e-09,3;UBERON:0002169,1.81e-09,3;UBERON:0004894,1.81e-09,3;UBERON:0004807,1.33e-08,28;UBERON:0005178,3.43e-07,34;UBERON:0002224,3.43e-07,34;UBERON:0005181,5.30e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68471475667626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43282702530686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539210106883961,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,1.27126825146383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.93819054686466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.34823682632161,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0.77380195455795,0,0,0,0,0,0,1.72723677587501,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0.845248493434508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0.115525666150338,0,0,0,0,0,0,0,0,0.443568258651136,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4541206133713,0.392600934460972,1.5849330247695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.36410323371586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:989392..989403,- | |||
}} |
Latest revision as of 13:09, 31 July 2015
Short description: | p@chr7:989392..989403, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr7:989392..989403, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 7.62e-26 | 1 |
seromucus secreting cell | 1.21e-13 | 2 |
epithelial cell of lung | 2.33e-12 | 19 |
pneumocyte | 1.81e-09 | 3 |
transitional epithelial cell | 1.59e-07 | 4 |
urothelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
epithelium of female gonad | 7.62e-26 | 1 |
epithelium of gonad | 1.21e-13 | 2 |
bronchoalveolar duct junction | 1.55e-13 | 2 |
alveolar duct | 1.55e-13 | 2 |
bronchiole | 1.55e-13 | 2 |
respiratory tract epithelium | 2.33e-12 | 19 |
lung epithelium | 2.33e-12 | 19 |
lung | 9.07e-11 | 22 |
respiratory tube | 9.07e-11 | 22 |
respiration organ | 9.07e-11 | 22 |
pair of lungs | 9.07e-11 | 22 |
lung primordium | 9.07e-11 | 22 |
lung bud | 9.07e-11 | 22 |
pulmonary alveolus epithelium | 1.81e-09 | 3 |
alveolus | 1.81e-09 | 3 |
pulmonary lobule | 1.81e-09 | 3 |
lobule | 1.81e-09 | 3 |
alveolus of lung | 1.81e-09 | 3 |
alveolar system | 1.81e-09 | 3 |
pulmonary acinus | 1.81e-09 | 3 |
alveolar sac | 1.81e-09 | 3 |
alveolar wall | 1.81e-09 | 3 |
respiratory system epithelium | 1.33e-08 | 28 |
thoracic cavity element | 3.43e-07 | 34 |
thoracic cavity | 3.43e-07 | 34 |
thoracic segment organ | 5.30e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
ovary epithelial cancer | 7.62e-26 | 1 |
non-small cell lung carcinoma | 1.10e-20 | 5 |
adenocarcinoma | 2.29e-16 | 25 |
lung cancer | 1.85e-15 | 15 |
respiratory system cancer | 1.53e-14 | 16 |
clear cell adenocarcinoma | 6.43e-14 | 2 |
signet ring cell adenocarcinoma | 1.07e-13 | 2 |
lung adenocarcinoma | 1.55e-13 | 2 |
lung carcinoma | 5.83e-12 | 9 |
carcinoma | 1.80e-11 | 106 |
lung large cell carcinoma | 1.19e-09 | 3 |
cell type cancer | 1.72e-08 | 143 |
squamous cell carcinoma | 4.82e-08 | 14 |