FFCP PHASE1:Hg19::chrX:20284429..20284435,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:20284429..20284435,+ | |||
|coexpression_cluster_id=C597 | |||
|description=CAGE_peak_at_chrX:20284429..20284435,+ | |||
|id=chrX:20284429..20284435,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.54e-45!42;CL:0000860!1.23e-41!45;CL:0000738!2.33e-39!140;CL:0000557!2.19e-36!71;CL:0002031!1.78e-35!124;CL:0000766!3.90e-35!76;CL:0000839!1.76e-32!70;CL:0000037!1.32e-31!172;CL:0000566!1.32e-31!172;CL:0000988!1.51e-31!182;CL:0002087!1.53e-30!119;CL:0002009!1.73e-29!65;CL:0002032!2.31e-29!165;CL:0000837!2.31e-29!165;CL:0002194!2.14e-26!63;CL:0000576!2.14e-26!63;CL:0000040!2.14e-26!63;CL:0000559!2.14e-26!63;CL:0000763!7.47e-26!112;CL:0000049!7.47e-26!112;CL:0002274!2.12e-11!5;CL:0000457!2.12e-11!5;CL:0002191!2.12e-11!5;CL:0000097!2.12e-11!5;CL:0000831!2.12e-11!5;CL:0002028!2.12e-11!5;CL:0000134!2.00e-10!358;CL:0000219!3.04e-10!390;CL:0002320!6.39e-10!365;CL:0000080!5.25e-09!6;CL:0002393!1.13e-08!9;CL:0002397!1.13e-08!9;CL:0000623!1.40e-07!3;CL:0000825!1.40e-07!3;CL:0000842!2.09e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.41e-48;33!CL:0002057;8.41e-48;33!CL:0000473;1.10e-32;39!CL:0000234;1.10e-32;39!CL:0000576;1.35e-29;48!CL:0000766;1.15e-22;69!CL:0002087;4.57e-13;104!CL:0002393;7.20e-13;6!CL:0002397;7.20e-13;6!CL:0000763;9.60e-12;100!CL:0000097;3.50e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-58,42;CL:0002057,1.03e-58,42;CL:0000473,5.35e-51,48;CL:0000234,5.35e-51,48;CL:0000557,1.51e-48,67;CL:0000766,5.85e-45,72;CL:0000839,2.16e-44,66;CL:0002009,1.44e-43,61;CL:0002194,3.46e-40,59;CL:0000576,3.46e-40,59;CL:0000040,3.46e-40,59;CL:0000559,3.46e-40,59;CL:0000763,3.76e-32,108;CL:0000049,3.76e-32,108;CL:0002031,2.33e-31,120;CL:0000738,4.80e-30,136;CL:0002032,7.65e-25,161;CL:0000837,7.65e-25,161;CL:0002087,3.52e-24,115;CL:0000037,1.16e-23,168;CL:0000988,2.82e-22,177;CL:0000134,3.07e-09,354;CL:0002320,5.54e-09,361;CL:0002393,9.55e-09,9;CL:0002397,9.55e-09,9;CL:0000219,4.45e-08,386;CL:0000097,3.34e-07,5;CL:0002028,3.34e-07,5;CL:0000048,5.73e-07,427;CL:0000723,8.16e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;5.75e-40;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.56e-31!102;UBERON:0003061!3.56e-31!102;UBERON:0002371!4.84e-31!80;UBERON:0001474!4.20e-28!86;UBERON:0002193!2.91e-27!112;UBERON:0004765!2.68e-22!101;UBERON:0001434!2.68e-22!101;UBERON:0002405!2.13e-19!115;UBERON:0003081!2.30e-10!216;UBERON:0002384!2.48e-10!375;UBERON:0002204!3.33e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.78e-42,76;UBERON:0001474,3.68e-39,82;UBERON:0004765,2.04e-35,90;UBERON:0002405,3.54e-34,93;UBERON:0002390,2.82e-32,98;UBERON:0003061,2.82e-32,98;UBERON:0001434,1.44e-31,100;UBERON:0002193,5.36e-29,108;UBERON:0002204,1.43e-17,167;UBERON:0003081,7.85e-14,203;UBERON:0002384,1.24e-08,371;UBERON:0000926,1.30e-07,315;UBERON:0004120,1.30e-07,315;UBERON:0006603,1.30e-07,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.154816123316076,0,0,0,0,0,0,4.43196326825502,4.21143339687298,3.47217393145363,0,0,0,0,0.377875943688809,0.727752183563449,0.232429036905685,0,1.54853185447552,3.74000110018796,0.512321413058201,1.18241114944293,6.55016793399575,2.5819387343353,2.70852973188684,0.188242339542605,0,0,4.89734227793444,2.88836124368484,8.95071976118658,0,0,0,4.06292934080018,3.40431134814684,3.73693349397345,0.251248665256743,0.521482918420201,0.217188844705117,3.02699751316684,4.41933163185078,1.58231193720442,0,0.212604299965044,0.209658645508376,0.112328631146495,0.450530678524519,0,0,0.19891667719909,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0.590129310341499,0,0.205601498999509,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0.289803085735052,0,0,1.04535523804977,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0.604820229674197,1.60464117470104,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,2.28060927094849,0.720599767084807,1.76739406796932,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0.112085143993527,1.18218456121156,0.862510299438069,0.256686072559497,0,0,0,0,0,0.749007023947182,5.9832291840805,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.431428401637234,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0.23874448473769,0,0,0,0,0,0,0.211125408127993,0,0,0,0.409074730008619,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0.247127877893006,0.208843899010911,0,0.802577647298789,0,0,0.391329237864179,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.899895566206002,12.3808312729272,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.129282956361551,0,0,0,0,0.157204305099666,0,0,0.197611631897944,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:20284429..20284435,+ | |||
}} |
Latest revision as of 07:27, 1 August 2015
Short description: | p@chrX:20284429..20284435, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:20284429..20284435, + |
Coexpression cluster: | C597_CD14_mature_immature_Eosinophils_Mast_embryonic_chorionic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.78e-42 | 76 |
bone element | 3.68e-39 | 82 |
skeletal element | 2.04e-35 | 90 |
immune system | 3.54e-34 | 93 |
hematopoietic system | 2.82e-32 | 98 |
blood island | 2.82e-32 | 98 |
skeletal system | 1.44e-31 | 100 |
hemolymphoid system | 5.36e-29 | 108 |
musculoskeletal system | 1.43e-17 | 167 |
lateral plate mesoderm | 7.85e-14 | 203 |
connective tissue | 1.24e-08 | 371 |
mesoderm | 1.30e-07 | 315 |
mesoderm-derived structure | 1.30e-07 | 315 |
presumptive mesoderm | 1.30e-07 | 315 |