FFCP PHASE1:Mm9::chr2:117938827..117938841,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=230|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:117938827..117938841,+|id=chr2:117938827..117938841,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000192,1.46e-25,3;CL:0000359,1.46e-25,3;CL:0002539,1.46e-25,3;CL:0000514,1.46e-25,3;CL:0000680,3.07e-22,6;CL:0000187,3.07e-22,6;CL:0000056,3.07e-22,6;CL:0000222,4.01e-19,7;CL:0002605,5.72e-17,2;CL:0002604,5.72e-17,2;CL:0000355,5.85e-15,9;CL:0000128,1.73e-12,6;CL:0000126,1.73e-12,6;CL:0000127,1.73e-12,6;CL:0002453,1.61e-09,8;CL:0000333,9.99e-08,10;CL:0000095,9.99e-08,10;CL:0000243,9.99e-08,10;CL:0000123,9.99e-08,10;CL:0000125,9.99e-08,10;CL:0000030,9.99e-08,10;CL:0000339,9.99e-08,10;CL:0002321,7.88e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005178!8.28e-09!17;UBERON:0005181!8.28e-09!17;UBERON:0002224!8.28e-09!17;UBERON:0000915!8.28e-09!17;UBERON:0008947!8.28e-09!17;UBERON:0003258!8.28e-09!17|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.46e-25,3;UBERON:0004237,1.46e-25,3;UBERON:0004695,1.46e-25,3;UBERON:0002111,1.46e-25,3;UBERON:0004178,1.46e-25,3;UBERON:0000947,2.34e-19,4;UBERON:0001637,2.34e-19,4;UBERON:0004573,2.34e-19,4;UBERON:0003509,2.34e-19,4;UBERON:0004571,2.34e-19,4;UBERON:0010191,2.34e-19,4;UBERON:0004572,2.34e-19,4;UBERON:0000055,1.27e-15,5;UBERON:0007500,1.27e-15,5;UBERON:0001981,1.27e-15,5;UBERON:0002049,1.27e-15,5;UBERON:0007798,1.27e-15,5;UBERON:0004537,1.27e-15,5;UBERON:0006965,1.27e-15,5;UBERON:0001134,5.85e-15,9;UBERON:0002036,5.85e-15,9;UBERON:0002385,5.85e-15,9;UBERON:0000486,5.85e-15,9;UBERON:0007503,5.85e-15,9;UBERON:0001015,5.85e-15,9;UBERON:0002329,5.85e-15,9;UBERON:0003082,5.85e-15,9;UBERON:0003059,5.85e-15,9;UBERON:0007282,5.85e-15,9;UBERON:0004290,5.85e-15,9;UBERON:0009618,5.85e-15,9;UBERON:0000383,1.69e-13,10;UBERON:0007524,2.66e-12,11;UBERON:0003077,2.66e-12,11;UBERON:0007285,2.66e-12,11;UBERON:0000305,2.52e-09,1|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,5.66535680890098,5.87986201073184,5.87349606917381,0,1.09012578190223,1.5378032791413,2.13872888981712,0.279972843250725,0,0,0,0,0.514518872071894,0,1.54701627683233,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.865964164044856,1.52015919285059,0.505524445014783,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0.287696137450811,1.78348749452539,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,0,0.709700426041343,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0|short_description=p@chr2:117938827..117938841,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=230 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:117938827..117938841,+ | |||
|description=CAGE_peak_at_chr2:117938827..117938841,+ | |||
|id=chr2:117938827..117938841,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000192,1.46e-25,3;CL:0000359,1.46e-25,3;CL:0002539,1.46e-25,3;CL:0000514,1.46e-25,3;CL:0000680,3.07e-22,6;CL:0000187,3.07e-22,6;CL:0000056,3.07e-22,6;CL:0000222,4.01e-19,7;CL:0002605,5.72e-17,2;CL:0002604,5.72e-17,2;CL:0000355,5.85e-15,9;CL:0000128,1.73e-12,6;CL:0000126,1.73e-12,6;CL:0000127,1.73e-12,6;CL:0002453,1.61e-09,8;CL:0000333,9.99e-08,10;CL:0000095,9.99e-08,10;CL:0000243,9.99e-08,10;CL:0000123,9.99e-08,10;CL:0000125,9.99e-08,10;CL:0000030,9.99e-08,10;CL:0000339,9.99e-08,10;CL:0002321,7.88e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!8.28e-09!17;UBERON:0005181!8.28e-09!17;UBERON:0002224!8.28e-09!17;UBERON:0000915!8.28e-09!17;UBERON:0008947!8.28e-09!17;UBERON:0003258!8.28e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,1.46e-25,3;UBERON:0004237,1.46e-25,3;UBERON:0004695,1.46e-25,3;UBERON:0002111,1.46e-25,3;UBERON:0004178,1.46e-25,3;UBERON:0000947,2.34e-19,4;UBERON:0001637,2.34e-19,4;UBERON:0004573,2.34e-19,4;UBERON:0003509,2.34e-19,4;UBERON:0004571,2.34e-19,4;UBERON:0010191,2.34e-19,4;UBERON:0004572,2.34e-19,4;UBERON:0000055,1.27e-15,5;UBERON:0007500,1.27e-15,5;UBERON:0001981,1.27e-15,5;UBERON:0002049,1.27e-15,5;UBERON:0007798,1.27e-15,5;UBERON:0004537,1.27e-15,5;UBERON:0006965,1.27e-15,5;UBERON:0001134,5.85e-15,9;UBERON:0002036,5.85e-15,9;UBERON:0002385,5.85e-15,9;UBERON:0000486,5.85e-15,9;UBERON:0007503,5.85e-15,9;UBERON:0001015,5.85e-15,9;UBERON:0002329,5.85e-15,9;UBERON:0003082,5.85e-15,9;UBERON:0003059,5.85e-15,9;UBERON:0007282,5.85e-15,9;UBERON:0004290,5.85e-15,9;UBERON:0009618,5.85e-15,9;UBERON:0000383,1.69e-13,10;UBERON:0007524,2.66e-12,11;UBERON:0003077,2.66e-12,11;UBERON:0007285,2.66e-12,11;UBERON:0000305,2.52e-09,1 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,5.66535680890098,5.87986201073184,5.87349606917381,0,1.09012578190223,1.5378032791413,2.13872888981712,0.279972843250725,0,0,0,0,0.514518872071894,0,1.54701627683233,0,0,0,0,0,0,0,0,0.299600110518405,0.768436610643109,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0.679971333707751,0,0,0,0,0.170430322578058,0.259786004602869,0,0,0,0,0,0.865964164044856,1.52015919285059,0.505524445014783,0,0,0,0,0,0,0.150722640552623,0.23517741427141,0,1.73036477414062,0,0,0,0.441683036920787,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0,0.203678727700633,0.373220911830279,0,0,0,0,0,0,0,0,0.0937017245597288,0.517406741478031,0,0.378212160335639,0,0.43839146485515,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0,0,0,0.213288250535234,0,0,0.201683524623343,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0.193952487167626,0,0.0632365371242573,0.147610147979602,0,0,0,0.333690211432188,0,0,0,0,0,0.287696137450811,1.78348749452539,0,0,0.744281895337007,0,0,0,0,0.184753190166605,0.189491411770485,0,0.169745085775188,0,0.167506257441816,0.238043640886014,0.780534591431195,0.315270288212382,0.221464689648775,0.159454768657487,0,0.172684981865896,0.144649058581512,0,0,0,0.275936746304732,0,0,0.163934945376675,0.504941854408746,0,0,0,0,0,0,0,0.584511715822624,0.790575555893047,0,0.709700426041343,0,0,0.329940245945071,0,0,0,0,0,0,0,0,0,0,0,1.03135543248187,0,0,0,0,0,0,0,0,0,0,0,0,0.484393280087717,0.120625849856312,0,0,0,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.216010681643603,0,0,0.134864346384821,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0,0,0.168956125490778,0,0,0,0,0,0,0.608175645870493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0,0,0,0.183151624267265,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354951612318675,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0,0.0985044823755635,0.409231043169689,0.154936841185966,0.192906610981141,0,0.467863216890817,0.429742108096597,0.765153328275374,0.220591419119515,0 | |||
|short_description=p@chr2:117938827..117938841,+ | |||
}} |
Latest revision as of 19:44, 3 August 2015
Short description: | p@chr2:117938827..117938841, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:117938827..117938841, + |
Coexpression cluster: | MCL_coexpression_mm9:230 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 1.46e-25 | 3 |
vascular associated smooth muscle cell | 1.46e-25 | 3 |
aortic smooth muscle cell | 1.46e-25 | 3 |
smooth muscle myoblast | 1.46e-25 | 3 |
muscle precursor cell | 3.07e-22 | 6 |
muscle cell | 3.07e-22 | 6 |
myoblast | 3.07e-22 | 6 |
mesodermal cell | 4.01e-19 | 7 |
astrocyte of the cerebral cortex | 5.72e-17 | 2 |
astrocyte of the hippocampus | 5.72e-17 | 2 |
multi-potent skeletal muscle stem cell | 5.85e-15 | 9 |
oligodendrocyte | 1.73e-12 | 6 |
macroglial cell | 1.73e-12 | 6 |
astrocyte | 1.73e-12 | 6 |
oligodendrocyte precursor cell | 1.61e-09 | 8 |
migratory neural crest cell | 9.99e-08 | 10 |
neuron associated cell | 9.99e-08 | 10 |
glial cell (sensu Vertebrata) | 9.99e-08 | 10 |
neuron associated cell (sensu Vertebrata) | 9.99e-08 | 10 |
glial cell | 9.99e-08 | 10 |
glioblast | 9.99e-08 | 10 |
glioblast (sensu Vertebrata) | 9.99e-08 | 10 |
embryonic cell | 7.88e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 1.46e-25 | 3 |
blood vessel smooth muscle | 1.46e-25 | 3 |
arterial system smooth muscle | 1.46e-25 | 3 |
artery smooth muscle tissue | 1.46e-25 | 3 |
aorta smooth muscle tissue | 1.46e-25 | 3 |
aorta | 2.34e-19 | 4 |
artery | 2.34e-19 | 4 |
systemic artery | 2.34e-19 | 4 |
arterial blood vessel | 2.34e-19 | 4 |
systemic arterial system | 2.34e-19 | 4 |
aortic system | 2.34e-19 | 4 |
arterial system | 2.34e-19 | 4 |
vessel | 1.27e-15 | 5 |
epithelial tube open at both ends | 1.27e-15 | 5 |
blood vessel | 1.27e-15 | 5 |
vasculature | 1.27e-15 | 5 |
vascular system | 1.27e-15 | 5 |
blood vasculature | 1.27e-15 | 5 |
vascular cord | 1.27e-15 | 5 |
skeletal muscle tissue | 5.85e-15 | 9 |
striated muscle tissue | 5.85e-15 | 9 |
muscle tissue | 5.85e-15 | 9 |
multilaminar epithelium | 5.85e-15 | 9 |
epithelial vesicle | 5.85e-15 | 9 |
musculature | 5.85e-15 | 9 |
somite | 5.85e-15 | 9 |
myotome | 5.85e-15 | 9 |
presomitic mesoderm | 5.85e-15 | 9 |
presumptive segmental plate | 5.85e-15 | 9 |
dermomyotome | 5.85e-15 | 9 |
trunk paraxial mesoderm | 5.85e-15 | 9 |
musculature of body | 1.69e-13 | 10 |
dense mesenchyme tissue | 2.66e-12 | 11 |
paraxial mesoderm | 2.66e-12 | 11 |
presumptive paraxial mesoderm | 2.66e-12 | 11 |
amnion | 2.52e-09 | 1 |