FFCP PHASE1:Mm9::chr16:44332782..44332799,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=320007|HGNC=|UniProt=|association_with_transcript=-128bp_to_ENSMUST00000124651_5end|description=CAGE_peak_4_at_Sidt1_5end|id=chr16:44332782..44332799,-|ontology_enrichment_celltype=CL:0000117!5.21e-09!23;CL:0000337!5.21e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-09,23;CL:0000337,4.10e-09,23;CL:0002612,6.58e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!2.07e-19!52;UBERON:0005068!2.07e-19!52;UBERON:0006241!2.07e-19!52;UBERON:0007135!2.07e-19!52;UBERON:0007811!2.83e-19!86;UBERON:0002346!1.00e-16!71;UBERON:0003075!1.00e-16!71;UBERON:0007284!1.00e-16!71;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0001017!1.62e-16!73;UBERON:0005743!1.62e-16!73;UBERON:0000153!3.47e-16!94;UBERON:0002616!3.71e-16!49;UBERON:0000073!1.64e-15!75;UBERON:0001016!1.64e-15!75;UBERON:0000033!2.95e-15!63;UBERON:0004121!1.33e-13!102;UBERON:0000924!1.33e-13!102;UBERON:0006601!1.33e-13!102;UBERON:0003080!8.09e-13!40;UBERON:0002780!3.74e-12!39;UBERON:0001890!3.74e-12!39;UBERON:0006240!3.74e-12!39;UBERON:0003056!6.99e-12!49;UBERON:0002020!1.23e-11!34;UBERON:0002791!4.76e-08!29;UBERON:0003528!4.76e-08!29;UBERON:0001893!4.76e-08!29;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.56e-28,52;UBERON:0005068,1.56e-28,52;UBERON:0006241,1.56e-28,52;UBERON:0007135,1.56e-28,52;UBERON:0000073,4.32e-27,54;UBERON:0002346,8.50e-22,64;UBERON:0003075,8.50e-22,64;UBERON:0007284,8.50e-22,64;UBERON:0001017,3.65e-21,73;UBERON:0001016,2.15e-20,75;UBERON:0002020,4.42e-19,34;UBERON:0002616,6.22e-19,46;UBERON:0000955,2.10e-18,47;UBERON:0006238,2.10e-18,47;UBERON:0010371,3.33e-18,73;UBERON:0003080,7.87e-17,40;UBERON:0004121,1.17e-15,95;UBERON:0000924,1.17e-15,95;UBERON:0006601,1.17e-15,95;UBERON:0002780,1.72e-15,39;UBERON:0001890,1.72e-15,39;UBERON:0006240,1.72e-15,39;UBERON:0002240,1.10e-13,6;UBERON:0005174,1.10e-13,6;UBERON:0001137,1.10e-13,6;UBERON:0003076,3.26e-13,12;UBERON:0003057,3.26e-13,12;UBERON:0010314,6.06e-13,92;UBERON:0003056,8.50e-13,49;UBERON:0001948,4.05e-12,5;UBERON:0002315,4.05e-12,5;UBERON:0003528,2.34e-11,29;UBERON:0002791,2.34e-11,29;UBERON:0001893,2.34e-11,29;UBERON:0002021,4.97e-10,10;UBERON:0000411,4.97e-10,10;UBERON:0001950,4.97e-10,10;UBERON:0000025,4.48e-09,114;UBERON:0002619,7.67e-09,17;UBERON:0004111,8.37e-09,122;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0002950,2.48e-08,4;UBERON:0001891,2.48e-08,4;UBERON:0009616,2.48e-08,4;UBERON:0010286,2.48e-08,4;UBERON:0002257,6.58e-08,3|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0,0.468129052643987,0.34243593645101,1.11681022593471,0,0.524522414513984,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.419959264876088,0,0,0,3.36093799142464,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.71346279724945,5.30084498283872,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.614426133024974,0.659431438650969,0.731901148819277,2.08365348222704,1.11673199600552,1.68828783009504,1.98637722109853,8.54422897873636,9.96601765593721,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0,0,0,0.301445281105245,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.79748767285787,0,0.251308704225729,2.25971616249959,1.79000820131231,0.62336413367868,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.512454881139399,0.655912071918102,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.68231958851302,1.85228302282712,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,1.05490517932983,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,2.14337035031592,2.6601035046341,4.45922044005176,3.29098041204242,1.2178597964584,0,0,0.441056796109924,0,0,0.120625849856312,0,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,1.01362607645082,1.43795340030758,0.77952493786677,1.07416017400489,0.39736270956253,0.240390899039938,0.738447635872886,0.504832249740738,0.685861259894999,0.403304740547362,0.292373642219257,0,1.5193997283604,0,0,0,0,0,0,0,0,0,3.95326289831947,3.22227665555024,4.01026859407578,2.23409137046794,0,1.5107877947794,0.675022500231806,2.2516060161211,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.888986911206461,1.44224540067226,0.64183841918363,0.252697211763798,0,0.565879024158229,0.842773567228942,0.704276676453562,0.229741875822453,1.42888107384922,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.761531471025089,1.09756783723664,0.526139422875686,0.950628796921032,2.80571135828869,0.830445126869219,0.394017929502254,0.409231043169689,1.08455788830176,0.771626443924566,1.49886346762768,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421|short_description=p4@Sidt1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:320007 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-128bp_to_ENSMUST00000124651_5end | |||
|cluster_id=chr16:44332782..44332799,- | |||
|description=CAGE_peak_4_at_Sidt1_5end | |||
|id=chr16:44332782..44332799,- | |||
|ontology_enrichment_celltype=CL:0000117!5.21e-09!23;CL:0000337!5.21e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-09,23;CL:0000337,4.10e-09,23;CL:0002612,6.58e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.07e-19!52;UBERON:0005068!2.07e-19!52;UBERON:0006241!2.07e-19!52;UBERON:0007135!2.07e-19!52;UBERON:0007811!2.83e-19!86;UBERON:0002346!1.00e-16!71;UBERON:0003075!1.00e-16!71;UBERON:0007284!1.00e-16!71;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0001017!1.62e-16!73;UBERON:0005743!1.62e-16!73;UBERON:0000153!3.47e-16!94;UBERON:0002616!3.71e-16!49;UBERON:0000073!1.64e-15!75;UBERON:0001016!1.64e-15!75;UBERON:0000033!2.95e-15!63;UBERON:0004121!1.33e-13!102;UBERON:0000924!1.33e-13!102;UBERON:0006601!1.33e-13!102;UBERON:0003080!8.09e-13!40;UBERON:0002780!3.74e-12!39;UBERON:0001890!3.74e-12!39;UBERON:0006240!3.74e-12!39;UBERON:0003056!6.99e-12!49;UBERON:0002020!1.23e-11!34;UBERON:0002791!4.76e-08!29;UBERON:0003528!4.76e-08!29;UBERON:0001893!4.76e-08!29;UBERON:0003076!1.16e-07!12;UBERON:0003057!1.16e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.56e-28,52;UBERON:0005068,1.56e-28,52;UBERON:0006241,1.56e-28,52;UBERON:0007135,1.56e-28,52;UBERON:0000073,4.32e-27,54;UBERON:0002346,8.50e-22,64;UBERON:0003075,8.50e-22,64;UBERON:0007284,8.50e-22,64;UBERON:0001017,3.65e-21,73;UBERON:0001016,2.15e-20,75;UBERON:0002020,4.42e-19,34;UBERON:0002616,6.22e-19,46;UBERON:0000955,2.10e-18,47;UBERON:0006238,2.10e-18,47;UBERON:0010371,3.33e-18,73;UBERON:0003080,7.87e-17,40;UBERON:0004121,1.17e-15,95;UBERON:0000924,1.17e-15,95;UBERON:0006601,1.17e-15,95;UBERON:0002780,1.72e-15,39;UBERON:0001890,1.72e-15,39;UBERON:0006240,1.72e-15,39;UBERON:0002240,1.10e-13,6;UBERON:0005174,1.10e-13,6;UBERON:0001137,1.10e-13,6;UBERON:0003076,3.26e-13,12;UBERON:0003057,3.26e-13,12;UBERON:0010314,6.06e-13,92;UBERON:0003056,8.50e-13,49;UBERON:0001948,4.05e-12,5;UBERON:0002315,4.05e-12,5;UBERON:0003528,2.34e-11,29;UBERON:0002791,2.34e-11,29;UBERON:0001893,2.34e-11,29;UBERON:0002021,4.97e-10,10;UBERON:0000411,4.97e-10,10;UBERON:0001950,4.97e-10,10;UBERON:0000025,4.48e-09,114;UBERON:0002619,7.67e-09,17;UBERON:0004111,8.37e-09,122;UBERON:0000956,1.64e-08,21;UBERON:0001869,1.64e-08,21;UBERON:0000203,1.64e-08,21;UBERON:0002950,2.48e-08,4;UBERON:0001891,2.48e-08,4;UBERON:0009616,2.48e-08,4;UBERON:0010286,2.48e-08,4;UBERON:0002257,6.58e-08,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.33575854382378,0.233612640595526,0.516493293766305,0,0.468129052643987,0.34243593645101,1.11681022593471,0,0.524522414513984,0,0.202475267389826,0,0,0.137114433605739,0.42438965179803,0.255129870453209,0,0,0,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0,0,0.419959264876088,0,0,0,3.36093799142464,0,0,0,0.404632921719196,0.528990979272033,1.26766280701236,0.677689064138264,0,0,0,0,0,0,0.311068836925433,0.270011876663381,0,3.71346279724945,5.30084498283872,0.122490799214954,0,0,1.10115880999389,0.638436690425939,0.614426133024974,0.659431438650969,0.731901148819277,2.08365348222704,1.11673199600552,1.68828783009504,1.98637722109853,8.54422897873636,9.96601765593721,2.60959224155421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.445326417194474,0,0,0,0.301445281105245,0.705532242814229,0.251333182659351,0,0,0,0,0,0,0,0.878342391034642,1.46612694769419,0,0,0,0,1.79748767285787,0,0.251308704225729,2.25971616249959,1.79000820131231,0.62336413367868,0.648965052271031,0,0,0,0.210441855886474,0,0,0,0,0.272145996605311,0.512454881139399,0.655912071918102,0.517406741478031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,1.68231958851302,1.85228302282712,0,0.264450566663544,0,0,0,0,0,0.190225626112559,0.474529061544512,0,0,0,0,0,0.216138049874694,0,0.189667900953082,0.114248512609729,0,0,0,0.280543279561274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0.491764273019036,0.275936746304732,0.321101179975584,1.05490517932983,0,0,0,0,0.215423397732799,0,0,0,0,0,0,0.963963949265421,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.646793418913773,2.14337035031592,2.6601035046341,4.45922044005176,3.29098041204242,1.2178597964584,0,0,0.441056796109924,0,0,0.120625849856312,0,0,0,1.48340241608408,0.170870880797853,0,0,0,0,0.228778173206523,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.134864346384821,0.247960367176008,0.785267825952089,0,1.24267862617385,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,1.01362607645082,1.43795340030758,0.77952493786677,1.07416017400489,0.39736270956253,0.240390899039938,0.738447635872886,0.504832249740738,0.685861259894999,0.403304740547362,0.292373642219257,0,1.5193997283604,0,0,0,0,0,0,0,0,0,3.95326289831947,3.22227665555024,4.01026859407578,2.23409137046794,0,1.5107877947794,0.675022500231806,2.2516060161211,0.906284817968409,1.55328093525546,0,0,0.170733605754134,0,0.419226325255965,0.183843508450014,0.888986911206461,1.44224540067226,0.64183841918363,0.252697211763798,0,0.565879024158229,0.842773567228942,0.704276676453562,0.229741875822453,1.42888107384922,0.231768651889711,0.38581844092741,0.412085900803307,0.441596760403192,0.342869252385415,0.70990322463735,0.476872379894642,0.290692833264657,0.376437521661322,0.761531471025089,1.09756783723664,0.526139422875686,0.950628796921032,2.80571135828869,0.830445126869219,0.394017929502254,0.409231043169689,1.08455788830176,0.771626443924566,1.49886346762768,0.467863216890817,0.644613162144895,0.191288332068843,0.661774257358546,0.231867835620421 | |||
|short_description=p4@Sidt1 | |||
}} |
Revision as of 20:08, 3 August 2015
Short description: | p4@Sidt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Sidt1_5end |
Coexpression cluster: | NA |
Association with transcript: | -128bp_to_ENSMUST00000124651_5end |
EntrezGene: | 320007 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.10e-09 | 23 |
neuroblast (sensu Vertebrata) | 4.10e-09 | 23 |
neuron of the ventral spinal cord | 6.58e-08 | 3 |