FFCP PHASE1:Mm9::chr3:53267616..53267631,+: Difference between revisions
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{{FFCP|EntrezGene=212127|HGNC=|MCL_coexpression_id=7|UniProt=Q3TTC7,Q5PRE5,E9PVD6|association_with_transcript=28bp_to_ENSMUST00000057705,ENSMUST00000058577,ENSMUST00000094274_5end|description=CAGE_peak_4_at_2810046L04Rik_5end|id=chr3:53267616..53267631,+|ontology_enrichment_celltype=CL:0000988!9.58e-12!32;CL:0002032!9.58e-12!32;CL:0000037!9.58e-12!32;CL:0000566!9.58e-12!32;CL:0000837!9.58e-12!32;CL:0002031!1.37e-08!25;CL:0000838!5.36e-08!12;CL:0000063!1.16e-07!66;CL:0000084!1.69e-07!11;CL:0000827!1.69e-07!11;CL:0000542!2.41e-07!13;CL:0000051!2.41e-07!13;CL:0000791!8.07e-07!9;CL:0000789!8.07e-07!9;CL:0002420!8.07e-07!9;CL:0002419!8.07e-07!9;CL:0000790!8.07e-07!9|ontology_enrichment_celltype_v019_2=CL:0000988,1.10e-19,32;CL:0002032,1.10e-19,32;CL:0000037,1.10e-19,32;CL:0000837,1.10e-19,32;CL:0002320,1.82e-14,46;CL:0000134,1.82e-14,46;CL:0002031,8.84e-13,25;CL:0000838,1.10e-12,12;CL:0000791,1.00e-11,9;CL:0000789,1.00e-11,9;CL:0002420,1.00e-11,9;CL:0002419,1.00e-11,9;CL:0000790,1.00e-11,9;CL:0000084,1.56e-11,11;CL:0000827,1.56e-11,11;CL:0000542,1.65e-11,13;CL:0000051,1.65e-11,13;CL:0000219,2.60e-11,54;CL:0000624,3.98e-10,8;CL:0000738,6.81e-10,17;CL:0002087,6.81e-10,17;CL:0000049,1.39e-09,19;CL:0000034,6.79e-09,97;CL:0000893,3.99e-07,6;CL:0002489,3.99e-07,6;CL:0000898,3.99e-07,6;CL:0000809,3.99e-07,6;CL:0000810,3.99e-07,6;CL:0000895,3.99e-07,6;CL:0000808,3.99e-07,6;CL:0000894,3.99e-07,6;CL:0000806,3.99e-07,6;CL:0000807,3.99e-07,6;CL:0000805,3.99e-07,6;CL:0002425,3.99e-07,6;CL:0002436,3.99e-07,6;CL:0002427,3.99e-07,6;CL:0002428,3.99e-07,6;CL:0002429,3.99e-07,6;CL:0002433,3.99e-07,6;CL:0002431,3.99e-07,6;CL:0002432,3.99e-07,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!8.93e-11!45;UBERON:0003061!8.93e-11!45;UBERON:0002193!3.28e-10!48;UBERON:0002405!4.70e-09!70;UBERON:0003929!1.46e-08!55;UBERON:0004177!4.14e-08!29;UBERON:0002370!2.15e-07!23;UBERON:0000974!2.15e-07!23;UBERON:0004807!2.15e-07!23;UBERON:0005058!2.15e-07!23;UBERON:0003351!2.15e-07!23;UBERON:0009113!2.15e-07!23;UBERON:0003295!2.15e-07!23;UBERON:0009722!2.15e-07!23;UBERON:0005562!2.15e-07!23;UBERON:0007690!2.15e-07!23;UBERON:0006562!4.56e-07!24;UBERON:0001557!4.56e-07!24;UBERON:0001042!4.56e-07!24;UBERON:0008814!4.56e-07!24;UBERON:0009145!4.56e-07!24;UBERON:0005911!4.60e-07!69;UBERON:0000490!6.80e-07!66|ontology_enrichment_uberon_v019_2=UBERON:0003929,8.95e-16,55;UBERON:0002384,1.82e-14,46;UBERON:0000490,6.54e-14,66;UBERON:0002390,2.09e-13,45;UBERON:0003061,2.09e-13,45;UBERON:0002193,2.76e-13,48;UBERON:0002405,2.76e-13,48;UBERON:0002370,1.86e-11,23;UBERON:0000974,1.86e-11,23;UBERON:0004807,1.86e-11,23;UBERON:0005058,1.86e-11,23;UBERON:0003351,1.86e-11,23;UBERON:0009113,1.86e-11,23;UBERON:0003295,1.86e-11,23;UBERON:0009722,1.86e-11,23;UBERON:0005562,1.86e-11,23;UBERON:0007690,1.86e-11,23;UBERON:0005911,5.52e-11,69;UBERON:0004177,6.27e-11,29;UBERON:0005057,6.27e-11,29;UBERON:0006562,8.13e-11,24;UBERON:0003408,8.13e-11,24;UBERON:0001557,8.13e-11,24;UBERON:0001042,8.13e-11,24;UBERON:0008814,8.13e-11,24;UBERON:0009145,8.13e-11,24;UBERON:0000077,2.08e-09,35;UBERON:0000072,3.45e-09,27;UBERON:0002368,2.44e-07,60;UBERON:0002530,4.04e-07,65|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,1.81478526784098,4.50806156951712,0.839396359559449,0.934450562382103,3.35720640948098,16.04991432529,20.1295492636914,3.76679530096111,2.55270908785077,0.856003649656029,1.13646523144697,1.66554880907831,0.404950534779652,1.39912375625629,0.788655413395594,1.09691546884591,0.42438965179803,0.17008658030214,0.794327609607082,1.56719873483361,0,0.22940928106717,0,0.430761996159075,0.861884930743556,0,0.252030129759931,0.443461021310609,1.27006134691926,2.46025915033828,0,1.73310971850765,0.831173226792462,3.06254034393554,1.25559489221072,0.7813353445238,1.0470474879476,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,1.51004345451963,5.07753499407941,6.04968838456435,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.725827286159344,0.540023753326763,0.630974884054146,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0.372798891650601,0.075726193333184,0.302286240427142,1.15945795480671,0,4.75979933595425,0,0,0,0.280888840263504,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,1.03575153458869,0.29688427812965,0.693941307064543,0,0.230615497256059,0,0.352766121407114,0,0,0,2.65383165584962,0.485300549842228,0,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,2.51611761462433,2.99951365496704,2.66847476853436,0.299581278809645,0.457500602818626,0.251308704225729,0,0,0,0.324482526135515,0.407357455401265,0.995255764880744,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.2587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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:212127 | |||
|HGNC= | |||
|MCL_coexpression_id=7 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3TTC7,uniprot:Q5PRE5,uniprot:E9PVD6 | |||
|association_with_transcript=28bp_to_ENSMUST00000057705,ENSMUST00000058577,ENSMUST00000094274_5end | |||
|cluster_id=chr3:53267616..53267631,+ | |||
|description=CAGE_peak_4_at_2810046L04Rik_5end | |||
|id=chr3:53267616..53267631,+ | |||
|ontology_enrichment_celltype=CL:0000988!9.58e-12!32;CL:0002032!9.58e-12!32;CL:0000037!9.58e-12!32;CL:0000566!9.58e-12!32;CL:0000837!9.58e-12!32;CL:0002031!1.37e-08!25;CL:0000838!5.36e-08!12;CL:0000063!1.16e-07!66;CL:0000084!1.69e-07!11;CL:0000827!1.69e-07!11;CL:0000542!2.41e-07!13;CL:0000051!2.41e-07!13;CL:0000791!8.07e-07!9;CL:0000789!8.07e-07!9;CL:0002420!8.07e-07!9;CL:0002419!8.07e-07!9;CL:0000790!8.07e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.10e-19,32;CL:0002032,1.10e-19,32;CL:0000037,1.10e-19,32;CL:0000837,1.10e-19,32;CL:0002320,1.82e-14,46;CL:0000134,1.82e-14,46;CL:0002031,8.84e-13,25;CL:0000838,1.10e-12,12;CL:0000791,1.00e-11,9;CL:0000789,1.00e-11,9;CL:0002420,1.00e-11,9;CL:0002419,1.00e-11,9;CL:0000790,1.00e-11,9;CL:0000084,1.56e-11,11;CL:0000827,1.56e-11,11;CL:0000542,1.65e-11,13;CL:0000051,1.65e-11,13;CL:0000219,2.60e-11,54;CL:0000624,3.98e-10,8;CL:0000738,6.81e-10,17;CL:0002087,6.81e-10,17;CL:0000049,1.39e-09,19;CL:0000034,6.79e-09,97;CL:0000893,3.99e-07,6;CL:0002489,3.99e-07,6;CL:0000898,3.99e-07,6;CL:0000809,3.99e-07,6;CL:0000810,3.99e-07,6;CL:0000895,3.99e-07,6;CL:0000808,3.99e-07,6;CL:0000894,3.99e-07,6;CL:0000806,3.99e-07,6;CL:0000807,3.99e-07,6;CL:0000805,3.99e-07,6;CL:0002425,3.99e-07,6;CL:0002436,3.99e-07,6;CL:0002427,3.99e-07,6;CL:0002428,3.99e-07,6;CL:0002429,3.99e-07,6;CL:0002433,3.99e-07,6;CL:0002431,3.99e-07,6;CL:0002432,3.99e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!8.93e-11!45;UBERON:0003061!8.93e-11!45;UBERON:0002193!3.28e-10!48;UBERON:0002405!4.70e-09!70;UBERON:0003929!1.46e-08!55;UBERON:0004177!4.14e-08!29;UBERON:0002370!2.15e-07!23;UBERON:0000974!2.15e-07!23;UBERON:0004807!2.15e-07!23;UBERON:0005058!2.15e-07!23;UBERON:0003351!2.15e-07!23;UBERON:0009113!2.15e-07!23;UBERON:0003295!2.15e-07!23;UBERON:0009722!2.15e-07!23;UBERON:0005562!2.15e-07!23;UBERON:0007690!2.15e-07!23;UBERON:0006562!4.56e-07!24;UBERON:0001557!4.56e-07!24;UBERON:0001042!4.56e-07!24;UBERON:0008814!4.56e-07!24;UBERON:0009145!4.56e-07!24;UBERON:0005911!4.60e-07!69;UBERON:0000490!6.80e-07!66 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003929,8.95e-16,55;UBERON:0002384,1.82e-14,46;UBERON:0000490,6.54e-14,66;UBERON:0002390,2.09e-13,45;UBERON:0003061,2.09e-13,45;UBERON:0002193,2.76e-13,48;UBERON:0002405,2.76e-13,48;UBERON:0002370,1.86e-11,23;UBERON:0000974,1.86e-11,23;UBERON:0004807,1.86e-11,23;UBERON:0005058,1.86e-11,23;UBERON:0003351,1.86e-11,23;UBERON:0009113,1.86e-11,23;UBERON:0003295,1.86e-11,23;UBERON:0009722,1.86e-11,23;UBERON:0005562,1.86e-11,23;UBERON:0007690,1.86e-11,23;UBERON:0005911,5.52e-11,69;UBERON:0004177,6.27e-11,29;UBERON:0005057,6.27e-11,29;UBERON:0006562,8.13e-11,24;UBERON:0003408,8.13e-11,24;UBERON:0001557,8.13e-11,24;UBERON:0001042,8.13e-11,24;UBERON:0008814,8.13e-11,24;UBERON:0009145,8.13e-11,24;UBERON:0000077,2.08e-09,35;UBERON:0000072,3.45e-09,27;UBERON:0002368,2.44e-07,60;UBERON:0002530,4.04e-07,65 | |||
|phase1_expression=0.320297694209588,1.04692622291808,1.81999695755814,1.81478526784098,4.50806156951712,0.839396359559449,0.934450562382103,3.35720640948098,16.04991432529,20.1295492636914,3.76679530096111,2.55270908785077,0.856003649656029,1.13646523144697,1.66554880907831,0.404950534779652,1.39912375625629,0.788655413395594,1.09691546884591,0.42438965179803,0.17008658030214,0.794327609607082,1.56719873483361,0,0.22940928106717,0,0.430761996159075,0.861884930743556,0,0.252030129759931,0.443461021310609,1.27006134691926,2.46025915033828,0,1.73310971850765,0.831173226792462,3.06254034393554,1.25559489221072,0.7813353445238,1.0470474879476,1.17646297606203,0,0.485510353031154,0,0,0,0,0,0.219686182734472,0,0.279972843250725,0,1.51004345451963,5.07753499407941,6.04968838456435,0.257259436035947,0,0,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0.299600110518405,0,0.725827286159344,0.540023753326763,0.630974884054146,0.285650984403804,0.441737081903227,0.244981598429908,0,0,0,0.255374676170375,0,0.131886287730194,0.0914876436024097,0,0,0,0.30559649555362,0,0.142371680799103,0.372798891650601,0.075726193333184,0.302286240427142,1.15945795480671,0,4.75979933595425,0,0,0,0.280888840263504,0.170430322578058,0,0,0.281686839553361,0,0,0,0,0.253359865475099,0.505524445014783,0.22836775943812,1.03575153458869,0.29688427812965,0.693941307064543,0,0.230615497256059,0,0.352766121407114,0,0,0,2.65383165584962,0.485300549842228,0,0.969750506270444,0,0.878342391034642,0.209446706813455,0.255457055208591,2.51611761462433,2.99951365496704,2.66847476853436,0.299581278809645,0.457500602818626,0.251308704225729,0,0,0,0.324482526135515,0.407357455401265,0.995255764880744,0,0,0.650602214813519,0.229902104433473,0,0.30140963567143,0.204109497453984,0.640568601424249,0.187403449119458,0.258703370739016,0.646703978798527,0.756424320671277,0.175951124163949,0.219195732427575,0,0,0.205782136407943,0.199034266818493,4.91549231119264,3.3455227924913,2.84163499395593,0.828503090142008,0,0.180062061461015,0.710234206755631,0.393528463494808,0.154267112887378,0,0.268273401399619,0.116765342367169,0,0.164167464079095,0.243206428637567,0.146199987425332,0,0.134206418760372,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,1.16118335930219,0.257734922644187,0.80673409849337,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0,0,0.898819408654221,0.432276099749388,0.398282546508734,0.569003702859245,0.456994050438915,0,0.814605311381257,0.193952487167626,0.631222379012867,0.0632365371242573,0.147610147979602,0,0,0,0.667380422864376,1.96558995113203,2.24862112384854,1.01430060694251,1.68824011826692,1.01850340712568,0.575392274901621,0.324270453550071,0,1.43768206527355,0,0.624075346229121,0,0.358794827043824,0,0,0.757965647081939,0.325929952884052,0.509235257325564,0.469380496577004,0.502518772325447,0.238043640886014,0,0.315270288212382,0.221464689648775,0,0.327726629431476,0.518054945597687,0,1.50791283939272,0.54390568381871,1.47529281905711,0,0.160550589987792,0.117211686592203,0,0.252470927204373,0.315508219416257,0,0.646270193198397,0,0,0,0,0.876767573733936,0.395287777946524,0.321321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.720244376125241,0.517434735131018,0,0.177340233642274,0,0.164549020602121,0,0,0.21183207086382,0,0,0.161464426695906,0.301564624640779,0,0.328281799490123,0,0.18542530201051,1.02522528478712,0,2.22233432843654,0.565105371014073,0.820165366326151,0.686334519619568,3.73952545986482,5.45810664062266,4.28419918793714,0.954670618015114,0.632671987162271,0.609958401380546,0,0.418176592028937,0,0.269728692769641,0.165306911450672,0.26175594198403,0.388844919875379,0,1.12738587736838,0.448549638131936,0.165458490457098,0.388902376688095,0.258319646955462,0.506868376472335,0.352071715937262,0.5208175393758,0.209718688851422,1.20792060413003,0.288030006257865,1.26404448251271,0.810900861160657,0.924398614483445,2.07873316764472,2.32734704367726,1.58945083825012,1.20195449519969,1.47689527174577,1.21159739937777,1.447929326445,1.00826185136841,0.487289403698762,0.962118416403295,1.5193997283604,0.226730383615211,0.221985953374065,1.25599399253266,0.167884616364078,0.19318959403219,0,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0.45032120322422,0,0,1.03787347584177,0.798049746802062,0.512200817262403,0.729320151204882,0.419226325255965,0.367687016900028,0,0.206035057238894,0.320919209591815,0.758091635291392,0,0.188626341386076,0.468207537349412,0.256100609619477,0.34461281373368,0,0.347652977834566,0.38581844092741,0,0.441596760403192,0,0.354951612318675,0.476872379894642,0.436039249896986,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0.543216455383447,0,0,0.0985044823755635,0.818462086339379,0.309873682371932,0.192906610981141,0.999242311751784,0.467863216890817,0.429742108096597,0.7651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| |||
|short_description=p4@2810046L04Rik | |||
}} |
Revision as of 20:51, 3 August 2015
Short description: | p4@2810046L04Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_2810046L04Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 28bp_to_ENSMUST00000057705, ENSMUST00000058577, ENSMUST00000094274_5end |
EntrezGene: | 212127 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
gut epithelium | 8.95e-16 | 55 |
connective tissue | 1.82e-14 | 46 |
unilaminar epithelium | 6.54e-14 | 66 |
hematopoietic system | 2.09e-13 | 45 |
blood island | 2.09e-13 | 45 |
hemolymphoid system | 2.76e-13 | 48 |
immune system | 2.76e-13 | 48 |
thymus | 1.86e-11 | 23 |
neck | 1.86e-11 | 23 |
respiratory system epithelium | 1.86e-11 | 23 |
hemolymphoid system gland | 1.86e-11 | 23 |
pharyngeal epithelium | 1.86e-11 | 23 |
thymic region | 1.86e-11 | 23 |
pharyngeal gland | 1.86e-11 | 23 |
entire pharyngeal arch endoderm | 1.86e-11 | 23 |
thymus primordium | 1.86e-11 | 23 |
early pharyngeal endoderm | 1.86e-11 | 23 |
endo-epithelium | 5.52e-11 | 69 |
hemopoietic organ | 6.27e-11 | 29 |
immune organ | 6.27e-11 | 29 |
pharynx | 8.13e-11 | 24 |
gland of gut | 8.13e-11 | 24 |
upper respiratory tract | 8.13e-11 | 24 |
chordate pharynx | 8.13e-11 | 24 |
pharyngeal arch system | 8.13e-11 | 24 |
pharyngeal region of foregut | 8.13e-11 | 24 |
mixed endoderm/mesoderm-derived structure | 2.08e-09 | 35 |
segment of respiratory tract | 3.45e-09 | 27 |
endocrine gland | 2.44e-07 | 60 |
gland | 4.04e-07 | 65 |