FFCP PHASE1:Mm9::chr7:106684550..106684563,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=142|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr7:106684550..106684563,-|id=chr7:106684550..106684563,-|ontology_enrichment_celltype=CL:0000791!5.17e-13!9;CL:0000789!5.17e-13!9;CL:0002420!5.17e-13!9;CL:0002419!5.17e-13!9;CL:0000790!5.17e-13!9;CL:0002031!2.62e-11!25;CL:0000084!1.56e-10!11;CL:0000827!1.56e-10!11;CL:0000624!2.14e-10!8;CL:0000838!1.33e-09!12;CL:0000738!7.62e-09!17;CL:0002087!7.62e-09!17;CL:0000542!8.16e-09!13;CL:0000051!8.16e-09!13;CL:0000988!1.90e-08!32;CL:0002032!1.90e-08!32;CL:0000037!1.90e-08!32;CL:0000566!1.90e-08!32;CL:0000837!1.90e-08!32|ontology_enrichment_celltype_v019_2=CL:0000624,1.88e-17,8;CL:0000791,1.46e-15,9;CL:0000789,1.46e-15,9;CL:0002420,1.46e-15,9;CL:0002419,1.46e-15,9;CL:0000790,1.46e-15,9;CL:0000084,8.32e-13,11;CL:0000827,8.32e-13,11;CL:0000838,9.03e-12,12;CL:0000542,6.81e-11,13;CL:0000051,6.81e-11,13;CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000355,1.56e-09,9;CL:0000738,2.09e-08,17;CL:0002087,2.09e-08,17|ontology_enrichment_disease=DOID:0060100!2.44e-11!3;DOID:4045!2.44e-11!3|ontology_enrichment_disease_v019_2=DOID:0060100,3.10e-27,3;DOID:4045,3.10e-27,3;DOID:0050686,5.52e-14,6|ontology_enrichment_uberon=UBERON:0001987!2.27e-07!2;UBERON:0003124!2.27e-07!2;UBERON:0004340!2.27e-07!2|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.56e-09,9;UBERON:0002036,1.56e-09,9;UBERON:0002385,1.56e-09,9;UBERON:0000486,1.56e-09,9;UBERON:0007503,1.56e-09,9;UBERON:0001015,1.56e-09,9;UBERON:0002329,1.56e-09,9;UBERON:0003082,1.56e-09,9;UBERON:0003059,1.56e-09,9;UBERON:0007282,1.56e-09,9;UBERON:0004290,1.56e-09,9;UBERON:0009618,1.56e-09,9;UBERON:0000383,1.23e-08,10;UBERON:0007524,6.67e-08,11;UBERON:0003077,6.67e-08,11;UBERON:0007285,6.67e-08,11|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,2.1950964985068,0.281577444303333,0,0,0,1.19840510951844,1.74840804837995,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,7.11503772252743,10.9386948233332,2.61761871986899,7.64700934440319,34.1522742479223,4.85510353031154,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0.42366414172764,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr7:106684550..106684563,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=142 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr7:106684550..106684563,- | |||
|description=CAGE_peak_at_chr7:106684550..106684563,- | |||
|id=chr7:106684550..106684563,- | |||
|ontology_enrichment_celltype=CL:0000791!5.17e-13!9;CL:0000789!5.17e-13!9;CL:0002420!5.17e-13!9;CL:0002419!5.17e-13!9;CL:0000790!5.17e-13!9;CL:0002031!2.62e-11!25;CL:0000084!1.56e-10!11;CL:0000827!1.56e-10!11;CL:0000624!2.14e-10!8;CL:0000838!1.33e-09!12;CL:0000738!7.62e-09!17;CL:0002087!7.62e-09!17;CL:0000542!8.16e-09!13;CL:0000051!8.16e-09!13;CL:0000988!1.90e-08!32;CL:0002032!1.90e-08!32;CL:0000037!1.90e-08!32;CL:0000566!1.90e-08!32;CL:0000837!1.90e-08!32 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.88e-17,8;CL:0000791,1.46e-15,9;CL:0000789,1.46e-15,9;CL:0002420,1.46e-15,9;CL:0002419,1.46e-15,9;CL:0000790,1.46e-15,9;CL:0000084,8.32e-13,11;CL:0000827,8.32e-13,11;CL:0000838,9.03e-12,12;CL:0000542,6.81e-11,13;CL:0000051,6.81e-11,13;CL:0000815,6.88e-10,1;CL:0000792,6.88e-10,1;CL:0000355,1.56e-09,9;CL:0000738,2.09e-08,17;CL:0002087,2.09e-08,17 | |||
|ontology_enrichment_disease=DOID:0060100!2.44e-11!3;DOID:4045!2.44e-11!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.10e-27,3;DOID:4045,3.10e-27,3;DOID:0050686,5.52e-14,6 | |||
|ontology_enrichment_uberon=UBERON:0001987!2.27e-07!2;UBERON:0003124!2.27e-07!2;UBERON:0004340!2.27e-07!2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.56e-09,9;UBERON:0002036,1.56e-09,9;UBERON:0002385,1.56e-09,9;UBERON:0000486,1.56e-09,9;UBERON:0007503,1.56e-09,9;UBERON:0001015,1.56e-09,9;UBERON:0002329,1.56e-09,9;UBERON:0003082,1.56e-09,9;UBERON:0003059,1.56e-09,9;UBERON:0007282,1.56e-09,9;UBERON:0004290,1.56e-09,9;UBERON:0009618,1.56e-09,9;UBERON:0000383,1.23e-08,10;UBERON:0007524,6.67e-08,11;UBERON:0003077,6.67e-08,11;UBERON:0007285,6.67e-08,11 | |||
|phase1_expression=0,0,0,0,0.500895729946347,0,0.233612640595526,2.1950964985068,0.281577444303333,0,0,0,1.19840510951844,1.74840804837995,0,0,0,0.157731082679119,0.137114433605739,0.42438965179803,0,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0,0,0,7.11503772252743,10.9386948233332,2.61761871986899,7.64700934440319,34.1522742479223,4.85510353031154,0,0,0,0,0,0,0,0,0,0,3.62681071005672,0.672187598284928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0,0,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.469343416127421,0.42366414172764,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0762068066549998,0,0,0,0,0,0,0,0.167884616364078,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr7:106684550..106684563,- | |||
}} |
Latest revision as of 20:54, 3 August 2015
Short description: | p@chr7:106684550..106684563, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr7:106684550..106684563, - |
Coexpression cluster: | MCL_coexpression_mm9:142 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD4-positive, alpha-beta T cell | 1.88e-17 | 8 |
mature alpha-beta T cell | 1.46e-15 | 9 |
alpha-beta T cell | 1.46e-15 | 9 |
immature T cell | 1.46e-15 | 9 |
mature T cell | 1.46e-15 | 9 |
immature alpha-beta T cell | 1.46e-15 | 9 |
T cell | 8.32e-13 | 11 |
pro-T cell | 8.32e-13 | 11 |
lymphoid lineage restricted progenitor cell | 9.03e-12 | 12 |
lymphocyte | 6.81e-11 | 13 |
common lymphoid progenitor | 6.81e-11 | 13 |
regulatory T cell | 6.88e-10 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 6.88e-10 | 1 |
multi-potent skeletal muscle stem cell | 1.56e-09 | 9 |
leukocyte | 2.09e-08 | 17 |
nongranular leukocyte | 2.09e-08 | 17 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.56e-09 | 9 |
striated muscle tissue | 1.56e-09 | 9 |
muscle tissue | 1.56e-09 | 9 |
multilaminar epithelium | 1.56e-09 | 9 |
epithelial vesicle | 1.56e-09 | 9 |
musculature | 1.56e-09 | 9 |
somite | 1.56e-09 | 9 |
myotome | 1.56e-09 | 9 |
presomitic mesoderm | 1.56e-09 | 9 |
presumptive segmental plate | 1.56e-09 | 9 |
dermomyotome | 1.56e-09 | 9 |
trunk paraxial mesoderm | 1.56e-09 | 9 |
musculature of body | 1.23e-08 | 10 |
dense mesenchyme tissue | 6.67e-08 | 11 |
paraxial mesoderm | 6.67e-08 | 11 |
presumptive paraxial mesoderm | 6.67e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.10e-27 | 3 |
muscle cancer | 3.10e-27 | 3 |
organ system cancer | 5.52e-14 | 6 |