FFCP PHASE1:Mm9::chr11:77767355..77767365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1283 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:77767355..77767365,+ | |||
|description=CAGE_peak_at_chr11:77767355..77767365,+ | |description=CAGE_peak_at_chr11:77767355..77767365,+ | ||
|id=chr11:77767355..77767365,+ | |id=chr11:77767355..77767365,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.00e-25!23;CL:0000337!2.00e-25!23;CL:0000540!6.23e-16!33;CL:0000047!6.23e-16!33;CL:0000031!6.23e-16!33;CL:0000404!6.23e-16!33;CL:0002319!2.42e-15!43;CL:0000221!7.62e-15!44;CL:0000133!7.62e-15!44;CL:0000393!1.32e-12!39;CL:0000211!1.32e-12!39;CL:0000055!2.77e-12!50;CL:0002609!6.67e-11!6;CL:0002321!4.94e-07!70;CL:0000220!4.94e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.22e-16,23;CL:0000337,3.22e-16,23;CL:0002609,1.04e-13,6;CL:0002319,2.08e-12,43;CL:0000221,4.33e-12,44;CL:0000133,4.33e-12,44;CL:0000540,5.97e-11,33;CL:0000047,5.97e-11,33;CL:0000031,5.97e-11,33;CL:0000404,5.97e-11,33;CL:0000393,4.41e-09,39;CL:0000211,4.41e-09,39;CL:0000120,1.65e-07,3;CL:0002613,3.22e-07,3;CL:0002321,5.46e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.66e-33!73;UBERON:0005743!2.66e-33!73;UBERON:0000073!4.19e-32!75;UBERON:0001016!4.19e-32!75;UBERON:0001049!2.80e-31!52;UBERON:0005068!2.80e-31!52;UBERON:0006241!2.80e-31!52;UBERON:0007135!2.80e-31!52;UBERON:0002020!3.45e-30!34;UBERON:0000955!6.36e-29!50;UBERON:0006238!6.36e-29!50;UBERON:0002616!1.71e-27!49;UBERON:0000033!4.32e-27!63;UBERON:0002346!6.03e-26!71;UBERON:0003075!6.03e-26!71;UBERON:0007284!6.03e-26!71;UBERON:0002791!6.60e-26!29;UBERON:0003528!6.60e-26!29;UBERON:0001893!6.60e-26!29;UBERON:0004121!1.57e-25!102;UBERON:0000924!1.57e-25!102;UBERON:0006601!1.57e-25!102;UBERON:0003056!9.94e-23!49;UBERON:0003080!4.19e-22!40;UBERON:0002780!4.10e-21!39;UBERON:0001890!4.10e-21!39;UBERON:0006240!4.10e-21!39;UBERON:0000956!3.65e-18!21;UBERON:0001869!3.65e-18!21;UBERON:0000203!3.65e-18!21;UBERON:0007811!3.99e-17!86;UBERON:0000153!8.08e-15!94;UBERON:0002619!2.04e-12!17;UBERON:0003076!1.60e-09!12;UBERON:0003057!1.60e-09!12;UBERON:0000025!4.47e-09!114;UBERON:0002420!8.22e-09!8;UBERON:0007245!8.22e-09!8;UBERON:0010009!8.22e-09!8;UBERON:0010011!8.22e-09!8;UBERON:0000454!8.22e-09!8;UBERON:0002021!2.38e-08!10;UBERON:0000411!2.38e-08!10;UBERON:0001950!2.38e-08!10;UBERON:0000369!3.62e-08!5;UBERON:0002435!3.62e-08!5;UBERON:0000204!3.62e-08!5;UBERON:0010082!3.62e-08!5;UBERON:0004111!6.71e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,7.57e-23,29;UBERON:0002791,7.57e-23,29;UBERON:0001893,7.57e-23,29;UBERON:0002020,1.02e-22,34;UBERON:0000956,1.97e-22,21;UBERON:0001869,1.97e-22,21;UBERON:0000203,1.97e-22,21;UBERON:0001017,9.22e-20,73;UBERON:0001016,3.57e-19,75;UBERON:0000955,1.37e-18,47;UBERON:0006238,1.37e-18,47;UBERON:0002021,1.56e-17,10;UBERON:0000411,1.56e-17,10;UBERON:0001950,1.56e-17,10;UBERON:0001049,1.17e-16,52;UBERON:0005068,1.17e-16,52;UBERON:0006241,1.17e-16,52;UBERON:0007135,1.17e-16,52;UBERON:0002780,1.50e-16,39;UBERON:0001890,1.50e-16,39;UBERON:0006240,1.50e-16,39;UBERON:0002616,2.56e-16,46;UBERON:0003080,4.31e-16,40;UBERON:0000073,5.75e-16,54;UBERON:0004121,1.19e-14,95;UBERON:0000924,1.19e-14,95;UBERON:0006601,1.19e-14,95;UBERON:0002619,1.45e-13,17;UBERON:0002346,3.78e-13,64;UBERON:0003075,3.78e-13,64;UBERON:0007284,3.78e-13,64;UBERON:0003056,8.20e-13,49;UBERON:0010371,2.87e-11,73;UBERON:0010314,1.69e-08,92 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0,1.92109152660777,1.55534418462716,2.43010688997043,1.68259969081106,0,0.441737081903227,0.734944795289724,1.24599112323707,0.919218786610021,0,0.766124028511126,0.768032666281217,0.527545150920775,1.37231465403614,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.71868654031819,0.68741272937475,0,0,0,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52617609466313,0,0,0.139986421625363,0,0,0,0,0,0,0,0.606949382578793,1.05798195854407,1.90149421051854,0,0,0,0,0,0,1.92109152660777,1.55534418462716,2.43010688997043,1.68259969081106,0,0.441737081903227,0.734944795289724,1.24599112323707,0.919218786610021,0,0.766124028511126,0.768032666281217,0.527545150920775,1.37231465403614,1.04182674111352,0.279182999001381,0,0.15279824777681,1.47314292736834,0.569486723196412,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,0.628340120440365,0,0,0,0,0.149790639404823,0.915001205637253,0.125654352112864,0.521472960576829,0,0.62336413367868,0.324482526135515,0,0,0,0,0,0.229902104433473,0.180062129805349,0,0.0680364991513279,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56369293868419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,1.38097570952153,1.71868654031819,0.68741272937475,0,0,0,1.35096360967266,1.81256963593682,1.03552062350364,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0.0574354689556133,0.476293691283074,0,0.192909220463705,0.412085900803307,0,0,0,0,0,0,0,0,0,0.271608227691724,0,0.118635018124174,0,0,0.154936841185966,0.385813221962283,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:77767355..77767365,+ | |short_description=p@chr11:77767355..77767365,+ | ||
}} | }} |
Latest revision as of 01:13, 4 August 2015
Short description: | p@chr11:77767355..77767365, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:77767355..77767365, + |
Coexpression cluster: | MCL_coexpression_mm9:1283 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.22e-16 | 23 |
neuroblast (sensu Vertebrata) | 3.22e-16 | 23 |
neuron of cerebral cortex | 1.04e-13 | 6 |
neural cell | 2.08e-12 | 43 |
ectodermal cell | 4.33e-12 | 44 |
neurectodermal cell | 4.33e-12 | 44 |
neuron | 5.97e-11 | 33 |
neuronal stem cell | 5.97e-11 | 33 |
neuroblast | 5.97e-11 | 33 |
electrically signaling cell | 5.97e-11 | 33 |
electrically responsive cell | 4.41e-09 | 39 |
electrically active cell | 4.41e-09 | 39 |
granule cell | 1.65e-07 | 3 |
striatum neuron | 3.22e-07 | 3 |
embryonic cell | 5.46e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
brain grey matter | 7.57e-23 | 29 |
regional part of telencephalon | 7.57e-23 | 29 |
telencephalon | 7.57e-23 | 29 |
gray matter | 1.02e-22 | 34 |
cerebral cortex | 1.97e-22 | 21 |
cerebral hemisphere | 1.97e-22 | 21 |
pallium | 1.97e-22 | 21 |
central nervous system | 9.22e-20 | 73 |
nervous system | 3.57e-19 | 75 |
brain | 1.37e-18 | 47 |
future brain | 1.37e-18 | 47 |
occipital lobe | 1.56e-17 | 10 |
visual cortex | 1.56e-17 | 10 |
neocortex | 1.56e-17 | 10 |
neural tube | 1.17e-16 | 52 |
neural rod | 1.17e-16 | 52 |
future spinal cord | 1.17e-16 | 52 |
neural keel | 1.17e-16 | 52 |
regional part of forebrain | 1.50e-16 | 39 |
forebrain | 1.50e-16 | 39 |
future forebrain | 1.50e-16 | 39 |
regional part of brain | 2.56e-16 | 46 |
anterior neural tube | 4.31e-16 | 40 |
regional part of nervous system | 5.75e-16 | 54 |
ectoderm-derived structure | 1.19e-14 | 95 |
ectoderm | 1.19e-14 | 95 |
presumptive ectoderm | 1.19e-14 | 95 |
regional part of cerebral cortex | 1.45e-13 | 17 |
neurectoderm | 3.78e-13 | 64 |
neural plate | 3.78e-13 | 64 |
presumptive neural plate | 3.78e-13 | 64 |
pre-chordal neural plate | 8.20e-13 | 49 |
ecto-epithelium | 2.87e-11 | 73 |
structure with developmental contribution from neural crest | 1.69e-08 | 92 |