FFCP PHASE1:Mm9::chr8:86264236..86264255,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr8:86264236..86264255,+ to FFCP PHASE1:Mm9::chr8:86264236..86264255,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:86264236..86264255,+ | |||
|description=CAGE_peak_at_chr8:86264236..86264255,+ | |||
|id=chr8:86264236..86264255,+ | |||
|ontology_enrichment_celltype=CL:0000988!2.52e-13!32;CL:0002032!2.52e-13!32;CL:0000037!2.52e-13!32;CL:0000566!2.52e-13!32;CL:0000837!2.52e-13!32;CL:0000838!3.68e-09!12;CL:0002031!9.91e-09!25;CL:0000542!2.98e-08!13;CL:0000051!2.98e-08!13;CL:0002320!3.29e-08!46;CL:0000134!3.29e-08!46;CL:0000791!3.89e-08!9;CL:0000789!3.89e-08!9;CL:0002420!3.89e-08!9;CL:0002419!3.89e-08!9;CL:0000790!3.89e-08!9;CL:0000084!5.34e-08!11;CL:0000827!5.34e-08!11;CL:0000624!5.68e-07!8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.63e-16,32;CL:0002032,3.63e-16,32;CL:0000037,3.63e-16,32;CL:0000837,3.63e-16,32;CL:0002031,2.66e-13,25;CL:0000553,4.97e-13,6;CL:0000556,4.97e-13,6;CL:0002320,2.34e-10,46;CL:0000134,2.34e-10,46;CL:0000838,4.67e-09,12;CL:0000049,4.69e-09,19;CL:0000791,1.16e-08,9;CL:0000789,1.16e-08,9;CL:0002420,1.16e-08,9;CL:0002419,1.16e-08,9;CL:0000790,1.16e-08,9;CL:0000050,1.40e-08,9;CL:0000219,2.13e-08,54;CL:0000542,2.62e-08,13;CL:0000051,2.62e-08,13;CL:0000034,1.60e-07,97;CL:0000084,5.05e-07,11;CL:0000827,5.05e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.71e-10,3;DOID:4045,3.71e-10,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.62e-13!45;UBERON:0003061!1.62e-13!45;UBERON:0002193!2.81e-13!48;UBERON:0002370!3.50e-13!23;UBERON:0000974!3.50e-13!23;UBERON:0004807!3.50e-13!23;UBERON:0005058!3.50e-13!23;UBERON:0003351!3.50e-13!23;UBERON:0009113!3.50e-13!23;UBERON:0003295!3.50e-13!23;UBERON:0009722!3.50e-13!23;UBERON:0005562!3.50e-13!23;UBERON:0007690!3.50e-13!23;UBERON:0006562!2.09e-12!24;UBERON:0003408!2.09e-12!24;UBERON:0001557!2.09e-12!24;UBERON:0001042!2.09e-12!24;UBERON:0008814!2.09e-12!24;UBERON:0009145!2.09e-12!24;UBERON:0000072!9.30e-12!27;UBERON:0004177!1.87e-10!29;UBERON:0002405!1.07e-08!70;UBERON:0000065!2.34e-08!41;UBERON:0002384!3.29e-08!46;UBERON:0001004!5.12e-08!42;UBERON:0000063!7.77e-08!35;UBERON:0003081!1.83e-07!88 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.36e-13,45;UBERON:0003061,1.36e-13,45;UBERON:0002193,1.55e-12,48;UBERON:0002405,1.55e-12,48;UBERON:0002370,6.97e-11,23;UBERON:0000974,6.97e-11,23;UBERON:0004807,6.97e-11,23;UBERON:0005058,6.97e-11,23;UBERON:0003351,6.97e-11,23;UBERON:0009113,6.97e-11,23;UBERON:0003295,6.97e-11,23;UBERON:0009722,6.97e-11,23;UBERON:0005562,6.97e-11,23;UBERON:0007690,6.97e-11,23;UBERON:0002384,2.34e-10,46;UBERON:0006562,2.34e-10,24;UBERON:0003408,2.34e-10,24;UBERON:0001557,2.34e-10,24;UBERON:0001042,2.34e-10,24;UBERON:0008814,2.34e-10,24;UBERON:0009145,2.34e-10,24;UBERON:0000072,5.18e-09,27;UBERON:0004177,2.85e-08,29;UBERON:0005057,2.85e-08,29 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,6.32704284863724,0.140788722151667,0.234064526321993,0.171217968225505,0,9.24483941628511,2.01066925563694,1.66554880907831,1.41732687172878,0,9.30613387806801,7.26706498110415,9.33657233955666,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,2.92972141515835,5.4693474116666,4.71171369576418,92.3523436208692,8.19654581950135,3.88408282424923,0,0,0,0,0,0,0,0,0,6.20795642413625,2.90144856804538,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.43778149407104,2.39961092397363,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,1.40442637462647,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.849892149969277,1.6794174278839,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.102710957164827,0,0.537080087002444,1.19208812868759,0.721172697119813,0.886137163047463,1.71642964911851,1.5241361331,1.61321896218945,1.07203668813728,1.92423683280659,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0,0,0,0.233612640595526,6.32704284863724,0.140788722151667,0.234064526321993,0.171217968225505,0,9.24483941628511,2.01066925563694,1.66554880907831,1.41732687172878,0,9.30613387806801,7.26706498110415,9.33657233955666,0,0.496454756004426,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,2.92972141515835,5.4693474116666,4.71171369576418,92.3523436208692,8.19654581950135,3.88408282424923,0,0,0,0,0,0,0,0,0,6.20795642413625,2.90144856804538,4.36921938885203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0.253359865475099,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,1.43778149407104,2.39961092397363,0.889491589511453,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219195732427575,0,0.696504333044333,0.205782136407943,0,1.40442637462647,0.51469581422943,0.568326998791185,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0,0,0,0,0,0.849892149969277,1.6794174278839,1.38199973804424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21207784439725,0.202725215290164,0.102710957164827,0,0.537080087002444,1.19208812868759,0.721172697119813,0.886137163047463,1.71642964911851,1.5241361331,1.61321896218945,1.07203668813728,1.92423683280659,1.5193997283604,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0.0574354689556133,0.476293691283074,0,0.38581844092741,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0,0.192906610981141,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr8:86264236..86264255,+ | |||
}} | }} |
Latest revision as of 05:01, 4 August 2015
Short description: | p@chr8:86264236..86264255, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:86264236..86264255, + |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.63e-16 | 32 |
hematopoietic oligopotent progenitor cell | 3.63e-16 | 32 |
hematopoietic stem cell | 3.63e-16 | 32 |
hematopoietic multipotent progenitor cell | 3.63e-16 | 32 |
hematopoietic lineage restricted progenitor cell | 2.66e-13 | 25 |
megakaryocyte progenitor cell | 4.97e-13 | 6 |
megakaryocyte | 4.97e-13 | 6 |
connective tissue cell | 2.34e-10 | 46 |
mesenchymal cell | 2.34e-10 | 46 |
lymphoid lineage restricted progenitor cell | 4.67e-09 | 12 |
common myeloid progenitor | 4.69e-09 | 19 |
mature alpha-beta T cell | 1.16e-08 | 9 |
alpha-beta T cell | 1.16e-08 | 9 |
immature T cell | 1.16e-08 | 9 |
mature T cell | 1.16e-08 | 9 |
immature alpha-beta T cell | 1.16e-08 | 9 |
megakaryocyte-erythroid progenitor cell | 1.40e-08 | 9 |
motile cell | 2.13e-08 | 54 |
lymphocyte | 2.62e-08 | 13 |
common lymphoid progenitor | 2.62e-08 | 13 |
stem cell | 1.60e-07 | 97 |
T cell | 5.05e-07 | 11 |
pro-T cell | 5.05e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.36e-13 | 45 |
blood island | 1.36e-13 | 45 |
hemolymphoid system | 1.55e-12 | 48 |
immune system | 1.55e-12 | 48 |
thymus | 6.97e-11 | 23 |
neck | 6.97e-11 | 23 |
respiratory system epithelium | 6.97e-11 | 23 |
hemolymphoid system gland | 6.97e-11 | 23 |
pharyngeal epithelium | 6.97e-11 | 23 |
thymic region | 6.97e-11 | 23 |
pharyngeal gland | 6.97e-11 | 23 |
entire pharyngeal arch endoderm | 6.97e-11 | 23 |
thymus primordium | 6.97e-11 | 23 |
early pharyngeal endoderm | 6.97e-11 | 23 |
connective tissue | 2.34e-10 | 46 |
pharynx | 2.34e-10 | 24 |
gland of gut | 2.34e-10 | 24 |
upper respiratory tract | 2.34e-10 | 24 |
chordate pharynx | 2.34e-10 | 24 |
pharyngeal arch system | 2.34e-10 | 24 |
pharyngeal region of foregut | 2.34e-10 | 24 |
segment of respiratory tract | 5.18e-09 | 27 |
hemopoietic organ | 2.85e-08 | 29 |
immune organ | 2.85e-08 | 29 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.71e-10 | 3 |
muscle cancer | 3.71e-10 | 3 |