FFCP PHASE1:Mm9::chr7:134164560..134164571,-: Difference between revisions
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{{FFCP|EntrezGene=69017|HGNC=|MCL_coexpression_id=1|UniProt=|association_with_transcript=31bp_to_ENSMUST00000161728_5end|description=CAGE_peak_4_at_Prrt2_5end|id=chr7:134164560..134164571,-|ontology_enrichment_celltype=CL:0000117!1.34e-07!23;CL:0000337!1.34e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,5.14e-11,23;CL:0000337,5.14e-11,23;CL:0000540,7.98e-07,33;CL:0000047,7.98e-07,33;CL:0000031,7.98e-07,33;CL:0000404,7.98e-07,33;CL:0002610,8.93e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!5.55e-19!52;UBERON:0005068!5.55e-19!52;UBERON:0006241!5.55e-19!52;UBERON:0007135!5.55e-19!52;UBERON:0000955!9.96e-18!50;UBERON:0006238!9.96e-18!50;UBERON:0000153!3.49e-17!94;UBERON:0002616!3.97e-17!49;UBERON:0007811!4.64e-17!86;UBERON:0000033!8.06e-17!63;UBERON:0000073!4.11e-16!75;UBERON:0001016!4.11e-16!75;UBERON:0001017!5.50e-16!73;UBERON:0005743!5.50e-16!73;UBERON:0002346!2.49e-15!71;UBERON:0003075!2.49e-15!71;UBERON:0007284!2.49e-15!71;UBERON:0002020!2.45e-14!34;UBERON:0003056!3.67e-13!49;UBERON:0004121!4.84e-13!102;UBERON:0000924!4.84e-13!102;UBERON:0006601!4.84e-13!102;UBERON:0003080!1.57e-12!40;UBERON:0002780!7.88e-12!39;UBERON:0001890!7.88e-12!39;UBERON:0006240!7.88e-12!39;UBERON:0002791!2.36e-11!29;UBERON:0003528!2.36e-11!29;UBERON:0001893!2.36e-11!29;UBERON:0000956!1.41e-08!21;UBERON:0001869!1.41e-08!21;UBERON:0000203!1.41e-08!21;UBERON:0002021!1.99e-08!10;UBERON:0000411!1.99e-08!10;UBERON:0001950!1.99e-08!10;UBERON:0002619!1.34e-07!17;UBERON:0003076!1.53e-07!12;UBERON:0003057!1.53e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.29e-35,54;UBERON:0001049,8.22e-32,52;UBERON:0005068,8.22e-32,52;UBERON:0006241,8.22e-32,52;UBERON:0007135,8.22e-32,52;UBERON:0001017,8.99e-31,73;UBERON:0001016,1.03e-29,75;UBERON:0002346,8.03e-28,64;UBERON:0003075,8.03e-28,64;UBERON:0007284,8.03e-28,64;UBERON:0002020,3.69e-26,34;UBERON:0004121,2.23e-24,95;UBERON:0000924,2.23e-24,95;UBERON:0006601,2.23e-24,95;UBERON:0000955,2.59e-24,47;UBERON:0006238,2.59e-24,47;UBERON:0010371,2.30e-23,73;UBERON:0002616,5.43e-23,46;UBERON:0002021,1.06e-19,10;UBERON:0000411,1.06e-19,10;UBERON:0001950,1.06e-19,10;UBERON:0003528,6.25e-19,29;UBERON:0002791,6.25e-19,29;UBERON:0001893,6.25e-19,29;UBERON:0003080,6.16e-18,40;UBERON:0010314,7.91e-17,92;UBERON:0003056,1.62e-16,49;UBERON:0002780,1.98e-16,39;UBERON:0001890,1.98e-16,39;UBERON:0006240,1.98e-16,39;UBERON:0003076,8.37e-16,12;UBERON:0003057,8.37e-16,12;UBERON:0002619,1.93e-15,17;UBERON:0000956,2.52e-14,21;UBERON:0001869,2.52e-14,21;UBERON:0000203,2.52e-14,21;UBERON:0002240,2.73e-11,6;UBERON:0005174,2.73e-11,6;UBERON:0001137,2.73e-11,6;UBERON:0000025,3.18e-10,114;UBERON:0001948,3.00e-09,5;UBERON:0002315,3.00e-09,5;UBERON:0004111,4.70e-09,122;UBERON:0002950,2.48e-08,4;UBERON:0001891,2.48e-08,4;UBERON:0009616,2.48e-08,4;UBERON:0010286,2.48e-08,4;UBERON:0011216,2.95e-07,194;UBERON:0004684,8.93e-07,3;UBERON:0002275,8.93e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.157731082679119,0,0,1.78590909317247,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,5.42736870367227,5.74258206474195,0.244981598429908,0.383381884072945,0,11.0115880999389,8.04430229936683,7.0659005297872,0.527545150920775,0.457438218012048,0,7.53794097303729,4.50210088025344,4.12555268997387,3.24091444021034,4.8406371471695,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0.173485326766136,0,0,0.452167921657868,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,26.6430525280508,24.7147114039877,0,0,0,0,16.1773890557209,8.23501085073528,3.64397621127307,15.2965401769203,12.5300574091862,8.51930982694196,8.11206315338788,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.476255494059295,1.15302348256365,0.374806898238915,1.03481348295606,0,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,14.930586348053,1.3377599609307,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,14.9312048688647,14.7686725106176,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,3.2132131642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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:69017 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=31bp_to_ENSMUST00000161728_5end | |||
|cluster_id=chr7:134164560..134164571,- | |||
|description=CAGE_peak_4_at_Prrt2_5end | |||
|id=chr7:134164560..134164571,- | |||
|ontology_enrichment_celltype=CL:0000117!1.34e-07!23;CL:0000337!1.34e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.14e-11,23;CL:0000337,5.14e-11,23;CL:0000540,7.98e-07,33;CL:0000047,7.98e-07,33;CL:0000031,7.98e-07,33;CL:0000404,7.98e-07,33;CL:0002610,8.93e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.55e-19!52;UBERON:0005068!5.55e-19!52;UBERON:0006241!5.55e-19!52;UBERON:0007135!5.55e-19!52;UBERON:0000955!9.96e-18!50;UBERON:0006238!9.96e-18!50;UBERON:0000153!3.49e-17!94;UBERON:0002616!3.97e-17!49;UBERON:0007811!4.64e-17!86;UBERON:0000033!8.06e-17!63;UBERON:0000073!4.11e-16!75;UBERON:0001016!4.11e-16!75;UBERON:0001017!5.50e-16!73;UBERON:0005743!5.50e-16!73;UBERON:0002346!2.49e-15!71;UBERON:0003075!2.49e-15!71;UBERON:0007284!2.49e-15!71;UBERON:0002020!2.45e-14!34;UBERON:0003056!3.67e-13!49;UBERON:0004121!4.84e-13!102;UBERON:0000924!4.84e-13!102;UBERON:0006601!4.84e-13!102;UBERON:0003080!1.57e-12!40;UBERON:0002780!7.88e-12!39;UBERON:0001890!7.88e-12!39;UBERON:0006240!7.88e-12!39;UBERON:0002791!2.36e-11!29;UBERON:0003528!2.36e-11!29;UBERON:0001893!2.36e-11!29;UBERON:0000956!1.41e-08!21;UBERON:0001869!1.41e-08!21;UBERON:0000203!1.41e-08!21;UBERON:0002021!1.99e-08!10;UBERON:0000411!1.99e-08!10;UBERON:0001950!1.99e-08!10;UBERON:0002619!1.34e-07!17;UBERON:0003076!1.53e-07!12;UBERON:0003057!1.53e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.29e-35,54;UBERON:0001049,8.22e-32,52;UBERON:0005068,8.22e-32,52;UBERON:0006241,8.22e-32,52;UBERON:0007135,8.22e-32,52;UBERON:0001017,8.99e-31,73;UBERON:0001016,1.03e-29,75;UBERON:0002346,8.03e-28,64;UBERON:0003075,8.03e-28,64;UBERON:0007284,8.03e-28,64;UBERON:0002020,3.69e-26,34;UBERON:0004121,2.23e-24,95;UBERON:0000924,2.23e-24,95;UBERON:0006601,2.23e-24,95;UBERON:0000955,2.59e-24,47;UBERON:0006238,2.59e-24,47;UBERON:0010371,2.30e-23,73;UBERON:0002616,5.43e-23,46;UBERON:0002021,1.06e-19,10;UBERON:0000411,1.06e-19,10;UBERON:0001950,1.06e-19,10;UBERON:0003528,6.25e-19,29;UBERON:0002791,6.25e-19,29;UBERON:0001893,6.25e-19,29;UBERON:0003080,6.16e-18,40;UBERON:0010314,7.91e-17,92;UBERON:0003056,1.62e-16,49;UBERON:0002780,1.98e-16,39;UBERON:0001890,1.98e-16,39;UBERON:0006240,1.98e-16,39;UBERON:0003076,8.37e-16,12;UBERON:0003057,8.37e-16,12;UBERON:0002619,1.93e-15,17;UBERON:0000956,2.52e-14,21;UBERON:0001869,2.52e-14,21;UBERON:0000203,2.52e-14,21;UBERON:0002240,2.73e-11,6;UBERON:0005174,2.73e-11,6;UBERON:0001137,2.73e-11,6;UBERON:0000025,3.18e-10,114;UBERON:0001948,3.00e-09,5;UBERON:0002315,3.00e-09,5;UBERON:0004111,4.70e-09,122;UBERON:0002950,2.48e-08,4;UBERON:0001891,2.48e-08,4;UBERON:0009616,2.48e-08,4;UBERON:0010286,2.48e-08,4;UBERON:0011216,2.95e-07,194;UBERON:0004684,8.93e-07,3;UBERON:0002275,8.93e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0.387369970324729,0,0,0,0,0.342401459862411,0.0874204024189974,0,0,0,0.157731082679119,0,0,1.78590909317247,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0,0.194429899074283,0,0,0,0,0,0.257259436035947,0,0,1.01158230429799,1.05798195854407,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0.210324961351382,5.42736870367227,5.74258206474195,0.244981598429908,0.383381884072945,0,11.0115880999389,8.04430229936683,7.0659005297872,0.527545150920775,0.457438218012048,0,7.53794097303729,4.50210088025344,4.12555268997387,3.24091444021034,4.8406371471695,2.42319279572891,0.075726193333184,0.302286240427142,0,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.79928715803342,0.258937883647172,0,0.173485326766136,0,0,0.452167921657868,0.117588707135705,0,0,0.144599356919912,0,0,0,0,0,26.6430525280508,24.7147114039877,0,0,0,0,16.1773890557209,8.23501085073528,3.64397621127307,15.2965401769203,12.5300574091862,8.51930982694196,8.11206315338788,0.101839363850316,0.124406970610093,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.476255494059295,1.15302348256365,0.374806898238915,1.03481348295606,0,0.567318240503458,0,0.43839146485515,0,0.348252166522167,0.61734640922383,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0.233530684734339,0,0,0,0.146199987425332,0,0,14.930586348053,1.3377599609307,0.330418782983798,0,0.213288250535234,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0.164698954724011,0,0,0.19496408711912,0,0,0.199141273254367,0,0.228497025219458,0,0,0,0.140271639780637,0.252946148497029,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0.335012514883631,0,0,0.157635144106191,0.221464689648775,0.478364305972461,0.163863314715738,0,0.144649058581512,0,0,0,0.275936746304732,14.9312048688647,14.7686725106176,0,0,0,0,0,0,0,0,0.404810701674894,0.292255857911312,0,3.21321316421807,0,0,0.325773918707152,0.164970122972535,0,0,0,0,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,0,0.18006109403131,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.658196082408484,0,0,0,0.220528398054962,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,16.5028518789354,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0,0,0.216010681643603,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0,0.129614973291793,0,0,0.149516546043979,0.165458490457098,0,0,0,0.58678619322877,0.2604087696879,0.314578033277133,0,0,1.26404448251271,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0.198681354781265,0.240390899039938,0.443068581523732,0.807731599585181,0.685861259894999,0.604957110821043,0.682205165178267,0.673482891482306,1.05189211963412,0,0,0,0,0,0,0,0,0,11.8597886949584,5.9842280745933,8.59343270159095,7.90524638780963,10.9613203163303,7.55393897389701,8.77529250301348,11.7083512838297,14.0474146785103,15.0150490408028,0.103787347584177,0.798049746802062,0.170733605754134,0,0.628839487883947,0.551530525350042,0.666740183404846,0.618105171716683,0.64183841918363,0.252697211763798,0.50695859978048,0.377252682772152,0.187283014939765,0.576226371643824,0.574354689556133,0,0.347652977834566,0.192909220463705,0.824171801606613,0.588795680537589,1.02860775715625,1.06485483695602,0.238436189947321,0.581385666529314,0.376437521661322,0.507687647350059,0.73171189149109,1.05227884575137,0.543216455383447,0,0.355905054372522,0.197008964751127,0,0.929621047115796,0.578719832943424,1.24905288968973,0.233931608445408,0.859484216193193,0.57386499620653,0.661774257358546,0.231867835620421 | |||
|short_description=p4@Prrt2 | |||
}} |
Revision as of 06:31, 4 August 2015
Short description: | p4@Prrt2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Prrt2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 31bp_to_ENSMUST00000161728_5end |
EntrezGene: | 69017 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.14e-11 | 23 |
neuroblast (sensu Vertebrata) | 5.14e-11 | 23 |
neuron | 7.98e-07 | 33 |
neuronal stem cell | 7.98e-07 | 33 |
neuroblast | 7.98e-07 | 33 |
electrically signaling cell | 7.98e-07 | 33 |
raphe nuclei neuron | 8.93e-07 | 3 |