FFCP PHASE1:Mm9::chr5:32436063..32436081,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:32436063..32436081,+
|short_description=p@chr5:32436063..32436081,+
|description=CAGE_peak_at_chr5:32436063..32436081,+
|association_with_transcript=NA
|E...") |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=260 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:32436063..32436081,+ | |||
|description=CAGE_peak_at_chr5:32436063..32436081,+ | |||
|id=chr5:32436063..32436081,+ | |||
|ontology_enrichment_celltype=CL:0000791!1.10e-16!9;CL:0000789!1.10e-16!9;CL:0002420!1.10e-16!9;CL:0002419!1.10e-16!9;CL:0000790!1.10e-16!9;CL:0000624!7.70e-15!8;CL:0000838!8.15e-15!12;CL:0000542!1.71e-13!13;CL:0000051!1.71e-13!13;CL:0000084!2.80e-13!11;CL:0000827!2.80e-13!11;CL:0000893!1.37e-11!6;CL:0002489!1.37e-11!6;CL:0000898!1.37e-11!6;CL:0000809!1.37e-11!6;CL:0000810!1.37e-11!6;CL:0000895!1.37e-11!6;CL:0000808!1.37e-11!6;CL:0000894!1.37e-11!6;CL:0000806!1.37e-11!6;CL:0000807!1.37e-11!6;CL:0000805!1.37e-11!6;CL:0002425!1.37e-11!6;CL:0002436!1.37e-11!6;CL:0002427!1.37e-11!6;CL:0002428!1.37e-11!6;CL:0002429!1.37e-11!6;CL:0002433!1.37e-11!6;CL:0002431!1.37e-11!6;CL:0002432!1.37e-11!6;CL:0000738!9.08e-10!17;CL:0002087!9.08e-10!17;CL:0000144!1.31e-07!121;CL:0000012!1.31e-07!121;CL:0000988!2.23e-07!32;CL:0002032!2.23e-07!32;CL:0000037!2.23e-07!32;CL:0000566!2.23e-07!32;CL:0000837!2.23e-07!32;CL:0000355!2.36e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.50e-11,9;CL:0000789,4.50e-11,9;CL:0002420,4.50e-11,9;CL:0002419,4.50e-11,9;CL:0000790,4.50e-11,9;CL:0000355,1.30e-10,9;CL:0000084,4.27e-09,11;CL:0000827,4.27e-09,11;CL:0000838,2.37e-08,12;CL:0000542,1.01e-07,13;CL:0000051,1.01e-07,13;CL:0000624,1.83e-07,8;CL:0000625,3.20e-07,1 | |||
|ontology_enrichment_disease=DOID:0060100!4.80e-07!3;DOID:4045!4.80e-07!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,3.50e-18,3;DOID:4045,3.50e-18,3;DOID:0050686,2.20e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0001134!2.36e-07!9;UBERON:0002036!2.36e-07!9;UBERON:0002385!2.36e-07!9;UBERON:0000486!2.36e-07!9;UBERON:0001015!2.36e-07!9;UBERON:0004290!2.36e-07!9;UBERON:0003082!2.36e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.30e-10,9;UBERON:0002036,1.30e-10,9;UBERON:0002385,1.30e-10,9;UBERON:0000486,1.30e-10,9;UBERON:0007503,1.30e-10,9;UBERON:0001015,1.30e-10,9;UBERON:0002329,1.30e-10,9;UBERON:0003082,1.30e-10,9;UBERON:0003059,1.30e-10,9;UBERON:0007282,1.30e-10,9;UBERON:0004290,1.30e-10,9;UBERON:0009618,1.30e-10,9;UBERON:0000383,1.42e-09,10;UBERON:0007524,1.01e-08,11;UBERON:0003077,1.01e-08,11;UBERON:0007285,1.01e-08,11 | |||
|phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.258246646883153,8.30653460694834,8.89445200023575,0.34243593645101,0.159544317990673,0.684802919724823,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0.332469290716985,0.612508068787107,2.92972141515835,4.6880120671428,1.0470474879476,2.94115744015507,7.5135003345429,5.82612423637384,0.251793635951155,0.202753862439029,1.28482726513177,0,0,0,0,0,0,0.335565212115473,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,1.35982743995084,1.81936888020755,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | |phase1_expression=0,0,0,0.30246421130683,0,0,0.233612640595526,0.258246646883153,8.30653460694834,8.89445200023575,0.34243593645101,0.159544317990673,0.684802919724823,0.699363219351979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.866554859253824,0.332469290716985,0.612508068787107,2.92972141515835,4.6880120671428,1.0470474879476,2.94115744015507,7.5135003345429,5.82612423637384,0.251793635951155,0.202753862439029,1.28482726513177,0,0,0,0,0,0,0.335565212115473,1.45072428402269,2.01656279485478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,1.28326477414318,0,0,0,0.253359865475099,0,0,0,0,0,0.304465478312141,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0.239630249011841,0.599902730993408,0.381210681219194,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0.23467170806371,0,0,0,0,0.0603129249281559,0,0,0,0,0,0,0,0,0,0,1.35982743995084,1.81936888020755,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0.220591419119515,0 | ||
|short_description=p@chr5:32436063..32436081,+ | |||
}} | }} |
Latest revision as of 07:28, 4 August 2015
Short description: | p@chr5:32436063..32436081, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:32436063..32436081, + |
Coexpression cluster: | MCL_coexpression_mm9:260 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.50e-11 | 9 |
alpha-beta T cell | 4.50e-11 | 9 |
immature T cell | 4.50e-11 | 9 |
mature T cell | 4.50e-11 | 9 |
immature alpha-beta T cell | 4.50e-11 | 9 |
multi-potent skeletal muscle stem cell | 1.30e-10 | 9 |
T cell | 4.27e-09 | 11 |
pro-T cell | 4.27e-09 | 11 |
lymphoid lineage restricted progenitor cell | 2.37e-08 | 12 |
lymphocyte | 1.01e-07 | 13 |
common lymphoid progenitor | 1.01e-07 | 13 |
CD4-positive, alpha-beta T cell | 1.83e-07 | 8 |
CD8-positive, alpha-beta T cell | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.30e-10 | 9 |
striated muscle tissue | 1.30e-10 | 9 |
muscle tissue | 1.30e-10 | 9 |
multilaminar epithelium | 1.30e-10 | 9 |
epithelial vesicle | 1.30e-10 | 9 |
musculature | 1.30e-10 | 9 |
somite | 1.30e-10 | 9 |
myotome | 1.30e-10 | 9 |
presomitic mesoderm | 1.30e-10 | 9 |
presumptive segmental plate | 1.30e-10 | 9 |
dermomyotome | 1.30e-10 | 9 |
trunk paraxial mesoderm | 1.30e-10 | 9 |
musculature of body | 1.42e-09 | 10 |
dense mesenchyme tissue | 1.01e-08 | 11 |
paraxial mesoderm | 1.01e-08 | 11 |
presumptive paraxial mesoderm | 1.01e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 3.50e-18 | 3 |
muscle cancer | 3.50e-18 | 3 |
organ system cancer | 2.20e-09 | 6 |