FFCP PHASE1:Mm9::chr8:90484707..90484721,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:90484707..90484721,- | |||
|description=CAGE_peak_at_chr8:90484707..90484721,- | |description=CAGE_peak_at_chr8:90484707..90484721,- | ||
|id=chr8:90484707..90484721,- | |id=chr8:90484707..90484721,- | ||
|ontology_enrichment_celltype=CL:0000117!9.13e-19!23;CL:0000337!9.13e-19!23;CL:0000540!6.09e-12!33;CL:0000047!6.09e-12!33;CL:0000031!6.09e-12!33;CL:0000404!6.09e-12!33;CL:0002319!1.20e-10!43;CL:0000221!3.17e-10!44;CL:0000133!3.17e-10!44;CL:0000393!5.08e-09!39;CL:0000211!5.08e-09!39;CL:0000055!4.46e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.67e-34,3;CL:0000117,2.17e-23,23;CL:0000337,2.17e-23,23;CL:0000540,2.46e-16,33;CL:0000047,2.46e-16,33;CL:0000031,2.46e-16,33;CL:0000404,2.46e-16,33;CL:0000120,1.73e-15,3;CL:0000393,7.88e-14,39;CL:0000211,7.88e-14,39;CL:0002319,1.52e-12,43;CL:0000221,2.93e-12,44;CL:0000133,2.93e-12,44;CL:0002321,1.12e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.97e-10!73;UBERON:0005743!7.97e-10!73;UBERON:0001049!1.36e-09!52;UBERON:0005068!1.36e-09!52;UBERON:0006241!1.36e-09!52;UBERON:0007135!1.36e-09!52;UBERON:0000073!2.77e-09!75;UBERON:0001016!2.77e-09!75;UBERON:0004121!1.69e-08!102;UBERON:0000924!1.69e-08!102;UBERON:0006601!1.69e-08!102;UBERON:0002616!8.68e-08!49;UBERON:0002346!1.07e-07!71;UBERON:0003075!1.07e-07!71;UBERON:0007284!1.07e-07!71;UBERON:0000955!1.73e-07!50;UBERON:0006238!1.73e-07!50;UBERON:0000033!2.37e-07!63;UBERON:0003076!3.31e-07!12;UBERON:0003057!3.31e-07!12;UBERON:0002020!3.77e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,7.72e-21,5;UBERON:0002435,7.72e-21,5;UBERON:0000204,7.72e-21,5;UBERON:0010082,7.72e-21,5;UBERON:0002420,2.64e-13,8;UBERON:0007245,2.64e-13,8;UBERON:0010009,2.64e-13,8;UBERON:0010011,2.64e-13,8;UBERON:0000454,2.64e-13,8;UBERON:0001017,1.46e-09,73;UBERON:0001016,2.65e-09,75;UBERON:0002020,2.40e-08,34;UBERON:0001049,1.16e-07,52;UBERON:0005068,1.16e-07,52;UBERON:0006241,1.16e-07,52;UBERON:0007135,1.16e-07,52;UBERON:0000073,2.24e-07,54;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.35005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0.766124028511126,0.768032666281217,4.48413378282659,3.20206752608434,6.77187381723788,0.837548997004143,0.56276261003168,0,0.294628585473668,0.711858403995515,1.86399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0.83115217823824,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0.551873492609465,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.241251699712623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0,0 | |phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0,0.219686182734472,0,0,0,0,0,0,0,0,0,1.41621522601718,2.11596391708813,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0.725827286159344,1.35005938331691,0.420649922702764,0.571301968807607,0.220868540951614,0,0.287536413054709,0.919218786610021,0,0.766124028511126,0.768032666281217,4.48413378282659,3.20206752608434,6.77187381723788,0.837548997004143,0.56276261003168,0,0.294628585473668,0.711858403995515,1.86399445825301,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0,0,0.125654352112864,0,0.255715457330331,0.83115217823824,0.486723789203273,0,0,0,0.210441855886474,0,0,0,0,0.136072998302656,0.12811372028485,0.187403449119458,0,0,0,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,0,0.308713837137853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0.228497025219458,0,0,0,0.0701358198903186,0.0632365371242573,0,0.156998727841375,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0,0,0.345369963731791,0.289298117163023,0,0,0,0.551873492609465,0,0.468846746368813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0,0,0,0,0.23467170806371,0,0,0.32977250588296,0,0.241251699712623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.448549638131936,0.165458490457098,0.194451188344048,0,0.337912250981556,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0,0.252697211763798,0,0,0.0936415074698824,0.128050304809739,0.229741875822453,0,0.347652977834566,0.38581844092741,0.412085900803307,0.588795680537589,0,0,0,0.145346416632329,0.0941093804153306,0,0.182927972872773,0,0,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0,0 | ||
|short_description=p@chr8:90484707..90484721,- | |short_description=p@chr8:90484707..90484721,- | ||
}} | }} |
Latest revision as of 07:31, 4 August 2015
Short description: | p@chr8:90484707..90484721, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr8:90484707..90484721, - |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.67e-34 | 3 |
CNS neuron (sensu Vertebrata) | 2.17e-23 | 23 |
neuroblast (sensu Vertebrata) | 2.17e-23 | 23 |
neuron | 2.46e-16 | 33 |
neuronal stem cell | 2.46e-16 | 33 |
neuroblast | 2.46e-16 | 33 |
electrically signaling cell | 2.46e-16 | 33 |
granule cell | 1.73e-15 | 3 |
electrically responsive cell | 7.88e-14 | 39 |
electrically active cell | 7.88e-14 | 39 |
neural cell | 1.52e-12 | 43 |
ectodermal cell | 2.93e-12 | 44 |
neurectodermal cell | 2.93e-12 | 44 |
embryonic cell | 1.12e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 7.72e-21 | 5 |
striatum | 7.72e-21 | 5 |
ventral part of telencephalon | 7.72e-21 | 5 |
future corpus striatum | 7.72e-21 | 5 |
basal ganglion | 2.64e-13 | 8 |
nuclear complex of neuraxis | 2.64e-13 | 8 |
aggregate regional part of brain | 2.64e-13 | 8 |
collection of basal ganglia | 2.64e-13 | 8 |
cerebral subcortex | 2.64e-13 | 8 |
central nervous system | 1.46e-09 | 73 |
nervous system | 2.65e-09 | 75 |
gray matter | 2.40e-08 | 34 |
neural tube | 1.16e-07 | 52 |
neural rod | 1.16e-07 | 52 |
future spinal cord | 1.16e-07 | 52 |
neural keel | 1.16e-07 | 52 |
regional part of nervous system | 2.24e-07 | 54 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |