FFCP PHASE1:Mm9::chr19:55960375..55960391,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr19:55960375..55960391,+ to FFCP PHASE1:Mm9::chr19:55960375..55960391,+: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=141 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:55960375..55960391,+ | |||
|description=CAGE_peak_at_chr19:55960375..55960391,+ | |||
|id=chr19:55960375..55960391,+ | |||
|ontology_enrichment_celltype=CL:0002613!5.25e-08!3;CL:0000117!5.58e-08!23;CL:0000337!5.58e-08!23;CL:0000120!1.42e-07!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,1.16e-30,3;CL:0000117,1.16e-20,23;CL:0000337,1.16e-20,23;CL:0000540,2.22e-14,33;CL:0000047,2.22e-14,33;CL:0000031,2.22e-14,33;CL:0000404,2.22e-14,33;CL:0000120,8.96e-14,3;CL:0002610,1.04e-13,3;CL:0000393,3.79e-12,39;CL:0000211,3.79e-12,39;CL:0002319,5.29e-11,43;CL:0000221,9.50e-11,44;CL:0000133,9.50e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!7.02e-07!8;UBERON:0007245!7.02e-07!8;UBERON:0010009!7.02e-07!8;UBERON:0010011!7.02e-07!8;UBERON:0000454!7.02e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,1.02e-18,5;UBERON:0002435,1.02e-18,5;UBERON:0000204,1.02e-18,5;UBERON:0010082,1.02e-18,5;UBERON:0004684,1.04e-13,3;UBERON:0002275,1.04e-13,3;UBERON:0002420,5.86e-12,8;UBERON:0007245,5.86e-12,8;UBERON:0010009,5.86e-12,8;UBERON:0010011,5.86e-12,8;UBERON:0000454,5.86e-12,8;UBERON:0001017,2.51e-08,73;UBERON:0001016,4.28e-08,75 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,1.40456071893706,1.0752457327937,15.1669230889723,13.7231465403614,7.29278718779464,0.837548997004143,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,2.49345653471472,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.853668028770671,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.64495489636016,0.633831403506179,0,0,0,0,0,0,0.384218305321555,0,0,0,0,0,0,0,0,0,1.40456071893706,1.0752457327937,15.1669230889723,13.7231465403614,7.29278718779464,0.837548997004143,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599162557619291,0,0,0,0,2.49345653471472,0.162241263067758,0,0,0,0,0.130120442962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65954501176592,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.453460767230423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,1.19707462020309,0.853668028770671,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.565879024158229,0,0.0640251524048693,0.0574354689556133,0.476293691283074,0.115884325944855,0.192909220463705,0,0,0,0,0,0.145346416632329,0.470546902076653,0.169229215783353,0.182927972872773,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0,0 | ||
|short_description=p@chr19:55960375..55960391,+ | |||
}} | }} |
Latest revision as of 08:52, 4 August 2015
Short description: | p@chr19:55960375..55960391, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:55960375..55960391, + |
Coexpression cluster: | MCL_coexpression_mm9:141 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 1.16e-30 | 3 |
CNS neuron (sensu Vertebrata) | 1.16e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.16e-20 | 23 |
neuron | 2.22e-14 | 33 |
neuronal stem cell | 2.22e-14 | 33 |
neuroblast | 2.22e-14 | 33 |
electrically signaling cell | 2.22e-14 | 33 |
granule cell | 8.96e-14 | 3 |
raphe nuclei neuron | 1.04e-13 | 3 |
electrically responsive cell | 3.79e-12 | 39 |
electrically active cell | 3.79e-12 | 39 |
neural cell | 5.29e-11 | 43 |
ectodermal cell | 9.50e-11 | 44 |
neurectodermal cell | 9.50e-11 | 44 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 1.02e-18 | 5 |
striatum | 1.02e-18 | 5 |
ventral part of telencephalon | 1.02e-18 | 5 |
future corpus striatum | 1.02e-18 | 5 |
raphe nuclei | 1.04e-13 | 3 |
reticular formation | 1.04e-13 | 3 |
basal ganglion | 5.86e-12 | 8 |
nuclear complex of neuraxis | 5.86e-12 | 8 |
aggregate regional part of brain | 5.86e-12 | 8 |
collection of basal ganglia | 5.86e-12 | 8 |
cerebral subcortex | 5.86e-12 | 8 |
central nervous system | 2.51e-08 | 73 |
nervous system | 4.28e-08 | 75 |