FFCP PHASE1:Mm9::chr19:55970072..55970081,+: Difference between revisions
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{{FFCP|EntrezGene=21416|HGNC=|MCL_coexpression_id=3209|UniProt=|association_with_transcript=-70bp_to_ENSMUST00000127653_5end|description=CAGE_peak_38_at_Tcf7l2_5end|id=chr19:55970072..55970081,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002613,3.08e-25,3;CL:0002610,6.49e-25,3;CL:0000117,6.23e-22,23;CL:0000337,6.23e-22,23;CL:0000540,3.70e-15,33;CL:0000047,3.70e-15,33;CL:0000031,3.70e-15,33;CL:0000404,3.70e-15,33;CL:0000393,9.42e-13,39;CL:0000211,9.42e-13,39;CL:0002319,1.61e-11,43;CL:0000120,2.51e-11,3;CL:0000221,3.03e-11,44;CL:0000133,3.03e-11,44;CL:0002321,7.57e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002420!4.60e-07!8;UBERON:0007245!4.60e-07!8;UBERON:0010009!4.60e-07!8;UBERON:0010011!4.60e-07!8;UBERON:0000454!4.60e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.49e-25,3;UBERON:0002275,6.49e-25,3;UBERON:0000369,1.99e-15,5;UBERON:0002435,1.99e-15,5;UBERON:0000204,1.99e-15,5;UBERON:0010082,1.99e-15,5;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0000073,1.72e-11,54;UBERON:0002420,7.14e-10,8;UBERON:0007245,7.14e-10,8;UBERON:0010009,7.14e-10,8;UBERON:0010011,7.14e-10,8;UBERON:0000454,7.14e-10,8;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002259,2.52e-09,1;UBERON:0002314,2.52e-09,1;UBERON:0004061,2.52e-09,1;UBERON:0006777,2.52e-09,1;UBERON:0005882,2.52e-09,1;UBERON:0003080,4.70e-07,40|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,5.50579404996943,1.78762273319263,3.22573719838111,2.63772575460388,3.7509933876988,4.16730696445408,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.54644086988199,0.457500602818626,0,0,0,2.0778804455956,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421|short_description=p38@Tcf7l2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:21416 | |||
|HGNC= | |||
|MCL_coexpression_id=3209 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-70bp_to_ENSMUST00000127653_5end | |||
|cluster_id=chr19:55970072..55970081,+ | |||
|description=CAGE_peak_38_at_Tcf7l2_5end | |||
|id=chr19:55970072..55970081,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002613,3.08e-25,3;CL:0002610,6.49e-25,3;CL:0000117,6.23e-22,23;CL:0000337,6.23e-22,23;CL:0000540,3.70e-15,33;CL:0000047,3.70e-15,33;CL:0000031,3.70e-15,33;CL:0000404,3.70e-15,33;CL:0000393,9.42e-13,39;CL:0000211,9.42e-13,39;CL:0002319,1.61e-11,43;CL:0000120,2.51e-11,3;CL:0000221,3.03e-11,44;CL:0000133,3.03e-11,44;CL:0002321,7.57e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002420!4.60e-07!8;UBERON:0007245!4.60e-07!8;UBERON:0010009!4.60e-07!8;UBERON:0010011!4.60e-07!8;UBERON:0000454!4.60e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,6.49e-25,3;UBERON:0002275,6.49e-25,3;UBERON:0000369,1.99e-15,5;UBERON:0002435,1.99e-15,5;UBERON:0000204,1.99e-15,5;UBERON:0010082,1.99e-15,5;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0000073,1.72e-11,54;UBERON:0002420,7.14e-10,8;UBERON:0007245,7.14e-10,8;UBERON:0010009,7.14e-10,8;UBERON:0010011,7.14e-10,8;UBERON:0000454,7.14e-10,8;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002259,2.52e-09,1;UBERON:0002314,2.52e-09,1;UBERON:0004061,2.52e-09,1;UBERON:0006777,2.52e-09,1;UBERON:0005882,2.52e-09,1;UBERON:0003080,4.70e-07,40 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,0,0,0,0,0,0,0,0.768436610643109,0,0,0,0,0,0,0,0,5.50579404996943,1.78762273319263,3.22573719838111,2.63772575460388,3.7509933876988,4.16730696445408,0.558365998002762,0.56276261003168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0,0,0,0,0,0,0,0,0,2.54644086988199,0.457500602818626,0,0,0,2.0778804455956,1.1356888414743,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315270288212382,0.221464689648775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0,0,0,0,0,0,0,0.720244376125241,0.129358683782755,0,0,0,0,0,0,0,0,0.32977250588296,0.161464426695906,0.180938774784468,0.119372344003136,0,0,0,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0.203319467126849,0,0,0.218362563746178,0,0,0,0.129614973291793,0,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.170733605754134,0.486213434136588,0,0.183843508450014,0.222246727801615,0,0,0,0,0.188626341386076,0.0936415074698824,0.0640251524048693,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.145346416632329,0.188218760830661,0.0846146078916765,0.182927972872773,0,0,0,0.237270036248348,0.29551344712669,0.409231043169689,0,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.231867835620421 | |||
|short_description=p38@Tcf7l2 | |||
}} |
Revision as of 08:59, 4 August 2015
Short description: | p38@Tcf7l2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_38_at_Tcf7l2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3209 |
Association with transcript: | -70bp_to_ENSMUST00000127653_5end |
EntrezGene: | 21416 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
striatum neuron | 3.08e-25 | 3 |
raphe nuclei neuron | 6.49e-25 | 3 |
CNS neuron (sensu Vertebrata) | 6.23e-22 | 23 |
neuroblast (sensu Vertebrata) | 6.23e-22 | 23 |
neuron | 3.70e-15 | 33 |
neuronal stem cell | 3.70e-15 | 33 |
neuroblast | 3.70e-15 | 33 |
electrically signaling cell | 3.70e-15 | 33 |
electrically responsive cell | 9.42e-13 | 39 |
electrically active cell | 9.42e-13 | 39 |
neural cell | 1.61e-11 | 43 |
granule cell | 2.51e-11 | 3 |
ectodermal cell | 3.03e-11 | 44 |
neurectodermal cell | 3.03e-11 | 44 |
embryonic cell | 7.57e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 6.49e-25 | 3 |
reticular formation | 6.49e-25 | 3 |
corpus striatum | 1.99e-15 | 5 |
striatum | 1.99e-15 | 5 |
ventral part of telencephalon | 1.99e-15 | 5 |
future corpus striatum | 1.99e-15 | 5 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
regional part of nervous system | 1.72e-11 | 54 |
basal ganglion | 7.14e-10 | 8 |
nuclear complex of neuraxis | 7.14e-10 | 8 |
aggregate regional part of brain | 7.14e-10 | 8 |
collection of basal ganglia | 7.14e-10 | 8 |
cerebral subcortex | 7.14e-10 | 8 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
corpora quadrigemina | 2.52e-09 | 1 |
midbrain tectum | 2.52e-09 | 1 |
neural tube mantle layer | 2.52e-09 | 1 |
tectal plate | 2.52e-09 | 1 |
neural tube alar plate | 2.52e-09 | 1 |
anterior neural tube | 4.70e-07 | 40 |